Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0757200-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:31795105:31797640:1 gene:Os01g0757200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GIBBERELLIN 2-OXIDASE 3 description:GA 2-oxidase3, GA metabolism (Os01t0757200-01)
Sequence

ATGGTGGTTCTCGCTGGCCCGCCCGCCGTCGATCACATCCCGCTGCTGAGGTCGCCGGAC
CCCGGCGACGTCTTCTCCGGCGTGCCGGTCGTCGACCTCGGCAGCCCCGGCGCGGCGAGG
GCCGTGGTGGACGCCTGCGAGCGGTACGGGTTCTTCAAGGTCGTCAACCACGGCGTGGCC
ACGGACACGATGGACAAGGCCGAGTCGGAGGCCGTCAGGTTCTTCTCCCAGACGCAGCCC
GACAAGGACCGCTCCGGCCCGGCCTACCCGTTCGGGTACGGCAGCAAGCGGATCGGGTTC
AATGGCGACATGGGGTGGCTCGAGTACCTCCTCCTCGCCCTCGACGACGCGTCGCTCGCC
GACGCCTGCACCGTCCCGTCCTGCGCGGTCTTCCGGGCCGCTCTGAACGAGTACATCTCG
GGGGTGCGGAAGGTGGCGGTGCGGGTGATGGAGGCGATGTCGGAGGGGCTGGGCATTGCG
CAGGCGGACGCGCTGAGCGCGCTGGTGACGGCGGAAGGGAGCGACCAGGTGTTCCGCGTG
AACCACTACCCGCCGTGCCGCGCGCTGCAGGGGCTCGGCTGCAGCGTCACCGGCTTCGGC
GAGCACACCGACCCGCAGCTCGTCTCCGTGCTCCGCTCAAACGGCACGTCCGGCCTGCAG
ATCGCGCTCCGCGACGGCCAGTGGGTGTCCGTGCCCTCCGACCGCGACTCCTTCTTCGTC
AACGTCGGCGACTCGTTGCAGGTTCTGACCAATGGGAGGTTCAAGAGCGTGAAGCACAGG
GTGGTGGCCAACAGCCTAAAGTCTAGGGTTTCCTTCATCTACTTTGGAGGGCCACCGTTA
GCACAGAGGATTGCACCATTGCCACAGCTGCTGGGGGAGGGAGAGCAGAGCCTGTACAAG
GAGTTCACATGGGATGAGTACAAGAAGGCTGCCTACAAATCAAGGCTTGGAGACAACAGG
CTGGCCCAGTTTGAGAAGAAGTAG

Peptide Sequence

PEP ID

Os01t0757200-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:31795105:31797640:1 gene:Os01g0757200 transcript:Os01t0757200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GIBBERELLIN 2-OXIDASE 3 description:GA 2-oxidase3, GA metabolism (Os01t0757200-01)
Sequence

MVVLAGPPAVDHIPLLRSPDPGDVFSGVPVVDLGSPGAARAVVDACERYGFFKVVNHGVA
TDTMDKAESEAVRFFSQTQPDKDRSGPAYPFGYGSKRIGFNGDMGWLEYLLLALDDASLA
DACTVPSCAVFRAALNEYISGVRKVAVRVMEAMSEGLGIAQADALSALVTAEGSDQVFRV
NHYPPCRALQGLGCSVTGFGEHTDPQLVSVLRSNGTSGLQIALRDGQWVSVPSDRDSFFV
NVGDSLQVLTNGRFKSVKHRVVANSLKSRVSFIYFGGPPLAQRIAPLPQLLGEGEQSLYK
EFTWDEYKKAAYKSRLGDNRLAQFEKK

Transcript Sequence

Transcript ID

Os01t0757200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:31795105:31797640:1 gene:Os01g0757200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GIBBERELLIN 2-OXIDASE 3 description:GA 2-oxidase3, GA metabolism (Os01t0757200-01)
Sequence

ACATGCACTTGCAGTCAGTGGTACAACACCACAGCAACGCACCACCGGCCATCAACCTCC
TCTCCCCTGCTTCTCGCTCGCTCTCCTGCCCTGTTTCTTGGAGAAGTGAGCTTAAGTGAG
AGCCTCTGTCCCTCGCACACGCTATTGGCCATGGTGGTTCTCGCTGGCCCGCCCGCCGTC
GATCACATCCCGCTGCTGAGGTCGCCGGACCCCGGCGACGTCTTCTCCGGCGTGCCGGTC
GTCGACCTCGGCAGCCCCGGCGCGGCGAGGGCCGTGGTGGACGCCTGCGAGCGGTACGGG
TTCTTCAAGGTCGTCAACCACGGCGTGGCCACGGACACGATGGACAAGGCCGAGTCGGAG
GCCGTCAGGTTCTTCTCCCAGACGCAGCCCGACAAGGACCGCTCCGGCCCGGCCTACCCG
TTCGGGTACGGCAGCAAGCGGATCGGGTTCAATGGCGACATGGGGTGGCTCGAGTACCTC
CTCCTCGCCCTCGACGACGCGTCGCTCGCCGACGCCTGCACCGTCCCGTCCTGCGCGGTC
TTCCGGGCCGCTCTGAACGAGTACATCTCGGGGGTGCGGAAGGTGGCGGTGCGGGTGATG
GAGGCGATGTCGGAGGGGCTGGGCATTGCGCAGGCGGACGCGCTGAGCGCGCTGGTGACG
GCGGAAGGGAGCGACCAGGTGTTCCGCGTGAACCACTACCCGCCGTGCCGCGCGCTGCAG
GGGCTCGGCTGCAGCGTCACCGGCTTCGGCGAGCACACCGACCCGCAGCTCGTCTCCGTG
CTCCGCTCAAACGGCACGTCCGGCCTGCAGATCGCGCTCCGCGACGGCCAGTGGGTGTCC
GTGCCCTCCGACCGCGACTCCTTCTTCGTCAACGTCGGCGACTCGTTGCAGGTTCTGACC
AATGGGAGGTTCAAGAGCGTGAAGCACAGGGTGGTGGCCAACAGCCTAAAGTCTAGGGTT
TCCTTCATCTACTTTGGAGGGCCACCGTTAGCACAGAGGATTGCACCATTGCCACAGCTG
CTGGGGGAGGGAGAGCAGAGCCTGTACAAGGAGTTCACATGGGATGAGTACAAGAAGGCT
GCCTACAAATCAAGGCTTGGAGACAACAGGCTGGCCCAGTTTGAGAAGAAGTAGCTAGCT
AGATGCCTAGCAACAGAACTGGCCGGTCAAGCAACAACGACTTTACTGCATGGCAGCTAG
CTACCTTAGCTATGTCTCACGCACACGTACGGTACACCATGACCACGAGAAGATGAAGCT
GCTTAAGAGAGAAAAAGAAAAGAAAATAAAAACAGGAAGAAGATAATAACTTCAAGATGC
ACAATGTACAGCCAGGTTGGATGGATAGCTAGATTTTTCTCGTGTGGCTAATCACCGTGT
GTGGTGAGGTGGGCTCCTTTCCTGTTTCGGAATACTGATCGATGGATGAACAGCCTCCAA
TAGTTAATGTTAACCAAATATAGCACAACAAAGGGGTTCTTTTCTTCCTTTGGTTGTTTC
TTTTTTCCTCTTGCCTTTGATTTTCTCGTCATGCTTTCTGAGCATTAATTATGTGTGCGT
GTATTTCGGTATACGTAACGTACTTTTACCTATGTGTGTATAGTACGTGGCTTGTGTTAA
CAAGTAAATATTATAGTCTCTCTCTTTCGTTATGCAACTGACTTCTGCGCGGTCCAAATG
CATTGATGGAGATATATCTATTGGTGTACAATGTCACCTTCAAGATTAATGAATTTTCAT
CACTCAGG