Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0756700-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:31761223:31763887:1 gene:Os01g0756700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SHAKER POTASSIUM CHANNEL 1 description:Shaker potassium channel, Salinity stress tolerance, Ion homeostasis (Os01t0756700-01)
Sequence	ATGCCACGTTCTTCTCGTATGAATCTGTGGCCGCATTGCTTCCCGTGTTTCGACGATGGC GACAGATCAGGCAACAGGTTCAGTACTGTATGCAACTTCCCCGATGATCTCCTCCCGTCG CTCGGTGCTACCGCTCACCAGCCTCCCAAGCTCAGGAAATACCTCGTCTCGCCTTATGAC CCGCGTTACAAGGTCTGGGAAACATTTCTGATCATCCTGGTGGTGTACTCGGCGTGGATC TGCCCGCTGGAGTTCGCATTCCTGAGGTACCTGCCCAGCGCGCCTTTTGTCGTGGACGAT GTCGTCAACGGGTTTTTCGCCGTCGACATCATGCTCACTTTCTTCGTCCCGTTCGTGGAC AAGAAGTCCTACCTCCTCGTTAACGATCCGAAGAAAATAGCAGTCAGGTACCTGTCGTCT TGGTTCGTCTTCGATGTATGCTCGACTGTTCCATTCCACTCCATCAGCCTGCTGTTCAAC GAGCACGGGCATGACCTTGGCTTCAAGTTTCTCAATGTTCTCAGGCTCTGGCGGTTGCGT CGAGTCAGTTCGATGTTTGCGAGGCTTGAGAAGGACATCCGGTTCAACTACGCGGTGATA CGCTGCACGAAGCTCATCTCGGTCACCCTCTTCGCGATACACTGCGCCGGGTGCATCAAC TACCTTATCGCCGACAGGTACCCGGACCCGAGGAGGACATGGATCGGCGCCGTGATGCCC AACTTCAGGGAGGACGGGCTGTGGATCCGGTACGTGACGGCCATGTACTGGTCCATCACG ACGCTGACCACCACGGGCTACGGCGACCTGCACGCCGAGAACGCCAGGGAGATGCTGTTC GGCATCTGCTACATGCTCTTCAACCTCTGGCTCACCGCCTACCTCATCGGCAACATGACC AACCTCGTCGTCCACAGCACCAGCCGCACCCGAGACTTTAGGGATGTGGTTCAGGCCGCC TCAGAATTCGCGGCGAGGAACCAGCTGCCGCAGCAAATAGAGGAGCAGATGCTGAACCAC ATATGCCTCCGGTACAAGACCGATGGCCTCAAGCAGCAGGAGACGCTAGACGTCCTCCCG AAGGCGATGCGATCCAGCATTTCTCACTACCTCTTCTTCCGGGTTGTTCAAGGAGCCTAC CTGTTCAAGGGAGTCTCCTCAAGGTTCATCCAGCAGTTGGTAACAGAGATGCAAGCAGAG TACTTCGCCCCAAAGGAAGACATCATACTGCAGAATGACAGCCCATCGGACTTGTATCTT CTTGTATCCGGAGCAGTAGACATTCTGGTATTCCTAGATGGAACAGAACAGGTTTACAGG AGAGCAGCTGAGGGAGAACTGCTAGGGGAGATAGGTGTACTGTGCAACAAGCCACAGTCG TTCACTTTCCGGACGACAAAACTATCTCAGATTCTGAGGATCAGTAGGACCAAGCTGTTG GGTATCATCCAGGAGAACAGAGAAGACGGCGACATCATCAGAAGCAACCTTCAGCAAGTG AACGTATAA

Peptide Sequence

PEP ID	Os01t0756700-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:31761223:31763887:1 gene:Os01g0756700 transcript:Os01t0756700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SHAKER POTASSIUM CHANNEL 1 description:Shaker potassium channel, Salinity stress tolerance, Ion homeostasis (Os01t0756700-01)
Sequence	MPRSSRMNLWPHCFPCFDDGDRSGNRFSTVCNFPDDLLPSLGATAHQPPKLRKYLVSPYD PRYKVWETFLIILVVYSAWICPLEFAFLRYLPSAPFVVDDVVNGFFAVDIMLTFFVPFVD KKSYLLVNDPKKIAVRYLSSWFVFDVCSTVPFHSISLLFNEHGHDLGFKFLNVLRLWRLR RVSSMFARLEKDIRFNYAVIRCTKLISVTLFAIHCAGCINYLIADRYPDPRRTWIGAVMP NFREDGLWIRYVTAMYWSITTLTTTGYGDLHAENAREMLFGICYMLFNLWLTAYLIGNMT NLVVHSTSRTRDFRDVVQAASEFAARNQLPQQIEEQMLNHICLRYKTDGLKQQETLDVLP KAMRSSISHYLFFRVVQGAYLFKGVSSRFIQQLVTEMQAEYFAPKEDIILQNDSPSDLYL LVSGAVDILVFLDGTEQVYRRAAEGELLGEIGVLCNKPQSFTFRTTKLSQILRISRTKLL GIIQENREDGDIIRSNLQQVNV

Transcript Sequence

Transcript ID	Os01t0756700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:31761223:31763887:1 gene:Os01g0756700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SHAKER POTASSIUM CHANNEL 1 description:Shaker potassium channel, Salinity stress tolerance, Ion homeostasis (Os01t0756700-01)
Sequence	ATTCAGCAACCTGACCTCTCCCGTTCTCCTGCAGCTAGCCTCCGGCCAGTCTCCAGCGCG TCGCCCTGGACCGAAATATTATGCCACGTTCTTCTCGTATGAATCTGTGGCCGCATTGCT TCCCGTGTTTCGACGATGGCGACAGATCAGGCAACAGGTTCAGTACTGTATGCAACTTCC CCGATGATCTCCTCCCGTCGCTCGGTGCTACCGCTCACCAGCCTCCCAAGCTCAGGAAAT ACCTCGTCTCGCCTTATGACCCGCGTTACAAGGTCTGGGAAACATTTCTGATCATCCTGG TGGTGTACTCGGCGTGGATCTGCCCGCTGGAGTTCGCATTCCTGAGGTACCTGCCCAGCG CGCCTTTTGTCGTGGACGATGTCGTCAACGGGTTTTTCGCCGTCGACATCATGCTCACTT TCTTCGTCCCGTTCGTGGACAAGAAGTCCTACCTCCTCGTTAACGATCCGAAGAAAATAG CAGTCAGGTACCTGTCGTCTTGGTTCGTCTTCGATGTATGCTCGACTGTTCCATTCCACT CCATCAGCCTGCTGTTCAACGAGCACGGGCATGACCTTGGCTTCAAGTTTCTCAATGTTC TCAGGCTCTGGCGGTTGCGTCGAGTCAGTTCGATGTTTGCGAGGCTTGAGAAGGACATCC GGTTCAACTACGCGGTGATACGCTGCACGAAGCTCATCTCGGTCACCCTCTTCGCGATAC ACTGCGCCGGGTGCATCAACTACCTTATCGCCGACAGGTACCCGGACCCGAGGAGGACAT GGATCGGCGCCGTGATGCCCAACTTCAGGGAGGACGGGCTGTGGATCCGGTACGTGACGG CCATGTACTGGTCCATCACGACGCTGACCACCACGGGCTACGGCGACCTGCACGCCGAGA ACGCCAGGGAGATGCTGTTCGGCATCTGCTACATGCTCTTCAACCTCTGGCTCACCGCCT ACCTCATCGGCAACATGACCAACCTCGTCGTCCACAGCACCAGCCGCACCCGAGACTTTA GGGATGTGGTTCAGGCCGCCTCAGAATTCGCGGCGAGGAACCAGCTGCCGCAGCAAATAG AGGAGCAGATGCTGAACCACATATGCCTCCGGTACAAGACCGATGGCCTCAAGCAGCAGG AGACGCTAGACGTCCTCCCGAAGGCGATGCGATCCAGCATTTCTCACTACCTCTTCTTCC GGGTTGTTCAAGGAGCCTACCTGTTCAAGGGAGTCTCCTCAAGGTTCATCCAGCAGTTGG TAACAGAGATGCAAGCAGAGTACTTCGCCCCAAAGGAAGACATCATACTGCAGAATGACA GCCCATCGGACTTGTATCTTCTTGTATCCGGAGCAGTAGACATTCTGGTATTCCTAGATG GAACAGAACAGGTTTACAGGAGAGCAGCTGAGGGAGAACTGCTAGGGGAGATAGGTGTAC TGTGCAACAAGCCACAGTCGTTCACTTTCCGGACGACAAAACTATCTCAGATTCTGAGGA TCAGTAGGACCAAGCTGTTGGGTATCATCCAGGAGAACAGAGAAGACGGCGACATCATCA GAAGCAACCTTCAGCAAGTGAACGTATAAGTGGGCTAGCTTCGCTGGGCGTGCTCAACGC AAGACAGATGCCTCTGTTGGAAAATAGCATTTAAGTTTTGAGCGGATAGCATCTAATAGT TTCTGTACAAAAAACTAAAAATGGAGGAAAGATCATGCGGTGGAACTGGTGAAAACTGAA AAGATTATCTGTACTAGAACATCATGCAGTGTAACTGGTGAAAAAACGATCTGTGTTCGG ACAGATCTTGGACGTTGAGACAATATCACCTGCCTGTCAAAGAAAACTACTACTACCTTT ACCAATC