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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0755700-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:31710636:31711784:1 gene:Os01g0755700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0755700-01)
Sequence

ATGGATCGGACGTCAGCCGTGCCGGGGAGAGTGAGCGACCCGGGGTCCGCGTGGTTCGGC
GGCGGCGAGAGGAGCTCGTCGGCCGGGCCGGGGCGCAACGTGCGGCTCATCGCCACCGCC
GTCGCCGCGTTCGTGTCCGTGCTCGGGCTGGCCCTGTTCCTCCACCTCTACGTCTGCCAC
GTACGCCGCCGGAACCGCAGGCGCGCGGCGGAAGCGGCCGCGCTGGCGACCGTGAACGCG
GGGGCGCCGCCCAAGCAGGTCGGGCTGGACCCGTCGGCCATCGCGGCGCTGCCGACCGCG
GCGTACGGGAAGGTGGCGGGCGGCGACGCGGCGGGCGGCACCACCGAGTGCGCCATCTGC
CTCGGCGCCATGCAGGAGGCGGACGCGGTGCGCGTGCTGCCGGCCTGCCGCCACGTGTTC
CACGTCGCCTGCATCGACAAGTGGCTCGCGTCCAGCTCGTCGTGCCCGGTCTGCCGCGCC
GGGGTGGAGCCGCCGCCGCCGCCTCCGTCAACGGCGGCGGCGAGGTGCGTGCACGAGAAG
CAGGACGCGGAGAAGGAGGAGGCGGCCGCCGGTAGCTCGGCGCCGGTGCGGGTGCTCGGC
GCGTCGCTAATGAAGATGCTGAGCAGGGAGAGACCGTCGCCGAGGAGGCAGCCGGGAGTC
CACGCCGTGGAAATGGAAGACTTGGAAAGCCAGCTGCCGCGGCCGCAACAGCAGTAG

Peptide Sequence

PEP ID

Os01t0755700-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:31710636:31711784:1 gene:Os01g0755700 transcript:Os01t0755700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0755700-01)
Sequence

MDRTSAVPGRVSDPGSAWFGGGERSSSAGPGRNVRLIATAVAAFVSVLGLALFLHLYVCH
VRRRNRRRAAEAAALATVNAGAPPKQVGLDPSAIAALPTAAYGKVAGGDAAGGTTECAIC
LGAMQEADAVRVLPACRHVFHVACIDKWLASSSSCPVCRAGVEPPPPPPSTAAARCVHEK
QDAEKEEAAAGSSAPVRVLGASLMKMLSRERPSPRRQPGVHAVEMEDLESQLPRPQQQ

Transcript Sequence

Transcript ID

Os01t0755700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:31710636:31711784:1 gene:Os01g0755700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0755700-01)
Sequence

AAATCAAATCATTAGCCAAGGCCAAGCAGGCGCGGCTGCTTAGCTTATAAAGAGACCAGA
TAGTACTACTCAGCTTAGCACACCCAAACCGCGCGCCATCTCACCAAACCAAGGGAGAAG
CTTAGCTCCGCCAACTAGCTCGCGCTCGCGTGTAGCGGATAAGCGGAGTATCGATCGATG
GATCGGACGTCAGCCGTGCCGGGGAGAGTGAGCGACCCGGGGTCCGCGTGGTTCGGCGGC
GGCGAGAGGAGCTCGTCGGCCGGGCCGGGGCGCAACGTGCGGCTCATCGCCACCGCCGTC
GCCGCGTTCGTGTCCGTGCTCGGGCTGGCCCTGTTCCTCCACCTCTACGTCTGCCACGTA
CGCCGCCGGAACCGCAGGCGCGCGGCGGAAGCGGCCGCGCTGGCGACCGTGAACGCGGGG
GCGCCGCCCAAGCAGGTCGGGCTGGACCCGTCGGCCATCGCGGCGCTGCCGACCGCGGCG
TACGGGAAGGTGGCGGGCGGCGACGCGGCGGGCGGCACCACCGAGTGCGCCATCTGCCTC
GGCGCCATGCAGGAGGCGGACGCGGTGCGCGTGCTGCCGGCCTGCCGCCACGTGTTCCAC
GTCGCCTGCATCGACAAGTGGCTCGCGTCCAGCTCGTCGTGCCCGGTCTGCCGCGCCGGG
GTGGAGCCGCCGCCGCCGCCTCCGTCAACGGCGGCGGCGAGGTGCGTGCACGAGAAGCAG
GACGCGGAGAAGGAGGAGGCGGCCGCCGGTAGCTCGGCGCCGGTGCGGGTGCTCGGCGCG
TCGCTAATGAAGATGCTGAGCAGGGAGAGACCGTCGCCGAGGAGGCAGCCGGGAGTCCAC
GCCGTGGAAATGGAAGACTTGGAAAGCCAGCTGCCGCGGCCGCAACAGCAGTAGCATATG
CGGCGAATAATCAGCGGCCATTTTTAAGCCATTTTTTGTTTCATTTTTCGCTTCGTTTAT
ACATCAAGCGTTCCATGTTGGTTCAGTATGAACTACATAAGTGTGTAAGTGTTTTTCTTT
ATTAGGAGAACGAAAGTTCTCCATTAGGTGTTTGGTGCTTGTAGCTGTCAAAGGAAAGGA
GCAGACCCGTCTCTTGTATTTGTACAAAGAAGGGAAAGTGGATAAAGCTCTGATGGAATT
TCTCTAGGC