Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0754700-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:31661724:31664288:-1 gene:Os01g0754700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0754700-01)
Sequence	ATGCCGAGCCCGAGTCCGAGCGCGCCGCCCTCCGCTTCCCTCTTCAACTCCCTCATCGCG TCCCGCGCCCGCGCCGGCCGCGCCGCCGAGGGCTTTGCGCTCCTCGCGCGCATGCTCGCC GCGGGCGTCGCCCCGACGGCGTTCACCTTCGCGCCGATCCTCTCCTCGCCTTCGGCCGGC GCCCGCTGCGCGGCGCAGCTGCACCCTCACATCCTCAAGAGCGGGCTGCTCCACAGCGAC CCCTACTCCGGGACATCGCTGGTGGGGTTCTTTGGGCGGAATGGCCGGTTTGATGATGCA CTCAGGTTGTTCGGCGAAATGCCTGTGCGGAGCGTCGTCACCTGGAACTGTCTCATCTCT TCGTTTGCGCAGCATGGACGTGCCTGCGATGCTGTGATCTGGTTCAGGGCGCTGGTTCGA AGCGGTAACAGCGTGTCTGATGGCTCTCTTGTGGCAGTACTTCCTGCTTTTGGCACACCA GAGCAAGTTCATGGGCTTGTGAAGAAAATTGCGATAGATTCCTTCTCAACAGTTGCAAAC TCATTGCTGAATTCATACTGTACTCACAGTTCCACGTCTTTGGCAGAGAATCTGTTTAGT GAGTTCATGTTCAGAGACGTGGTTTCTTGGAATACAATGATCATTGCCTTCGCTAGGAGA AGCTTGCCTCAGAGAGCCCTTGAATTTTTCTGGATGATGGAAGGTTGGAGTGTTTTGCCC AATGAAATAACATTTAGCAGTGTAATTTATGCCTGCACCAGTATAAATGGACATGAACAT GGGAAGTCCATTCATGCAAAAGTTATCAAACACAATCTCAATACGAGACCATTTGTGAAC ACTTCACTGTTTGATTTCTATTCAAAATGTGGTTGTACGAAGGATGCTCACAAAGTTCTT GAAGAAGCTCCTGAGGATAGCACCACACGTTGGAATGGACTGATTTCTTGTCACTCAGAT ACTGATGTTCCAACGTCGTTTTTTATTCTGAGAGAGATGTTGCGATCTGGTGTTATGCCA AACGAGGTTAGTTTGTCTTCTTTGCTCAAGGACCCATCAGTATTCGATCTGTTGCAGATT CACTCGTTGGTAACAAGATTGGGTTACGACGGCTATGACTATGTCTCAAGTGCCATTATA TCTTCATATGCTTCACATGAAATGGTTTCTGATGCTTTGGCTTATGGGGGTATGTTAGAT CCTGACTCCTGTGCTGTCTCCATGAATGTTTTAGCTGGGGTATATAACAGAGTCCGCATG TATGACGAAGCGAAGAAGCTACTTTTACATCAGGGATGTAATGACACTGTTTCATGGAGC ATACTTATCACTGCTTGTGCAAGGAATGGTGATTATGCTGAAGCTCTTAAATTTTTCGAA CTGATGAGAATTTTGGGGCATCATTTTGATAGCTATGTATCTGTGAGCCTGCTAAGCATT TGTACAAAGTCTAATAGCCTTGTTCTTGGTAGGTTGCTTCATGGGCTTATCATCAAGACC AATTCTGGTTGCTTAGATACTTATGTTCATAATATGTTGCTAGATATGTATGCTAAGTGC GGTAGAATTGAAGAATGTCTGAAAGCCTTTAAGGAAATGGAAGATAGGAACATTATCTCC TGGACAGCTATAATTTCTGGCCTTGCACTTAATGGTTTTTCTCGTAAGGCCCTGGCATGG TTTAAAGCCATGGAAGAGGATGGCTTCAAACCTGACAAGGTAGCAATTACAGCAGTCCTT TCAGCTTGTAGGCATGGTGGACTGGTGCATGAAGGAATGAATATATTCAGACATATGAAG TCTGAATATTCAATCGAGCCTGAGATGGAGCATTACATTTGTGTGGTGGACATGCTATGC AAGTGTGGTCATTTGAAGGAAGCTGAGGTTGTGATTAGAGGCATGCCATTCCAACCAAGT GCTGTCGTATGGCGCACATTCCTCCAAGGTTGCCAGACATACGGTATGATAGATACTCAA GTACTTAGCTAG

Peptide Sequence

PEP ID	Os01t0754700-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:31661724:31664288:-1 gene:Os01g0754700 transcript:Os01t0754700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0754700-01)
Sequence	MPSPSPSAPPSASLFNSLIASRARAGRAAEGFALLARMLAAGVAPTAFTFAPILSSPSAG ARCAAQLHPHILKSGLLHSDPYSGTSLVGFFGRNGRFDDALRLFGEMPVRSVVTWNCLIS SFAQHGRACDAVIWFRALVRSGNSVSDGSLVAVLPAFGTPEQVHGLVKKIAIDSFSTVAN SLLNSYCTHSSTSLAENLFSEFMFRDVVSWNTMIIAFARRSLPQRALEFFWMMEGWSVLP NEITFSSVIYACTSINGHEHGKSIHAKVIKHNLNTRPFVNTSLFDFYSKCGCTKDAHKVL EEAPEDSTTRWNGLISCHSDTDVPTSFFILREMLRSGVMPNEVSLSSLLKDPSVFDLLQI HSLVTRLGYDGYDYVSSAIISSYASHEMVSDALAYGGMLDPDSCAVSMNVLAGVYNRVRM YDEAKKLLLHQGCNDTVSWSILITACARNGDYAEALKFFELMRILGHHFDSYVSVSLLSI CTKSNSLVLGRLLHGLIIKTNSGCLDTYVHNMLLDMYAKCGRIEECLKAFKEMEDRNIIS WTAIISGLALNGFSRKALAWFKAMEEDGFKPDKVAITAVLSACRHGGLVHEGMNIFRHMK SEYSIEPEMEHYICVVDMLCKCGHLKEAEVVIRGMPFQPSAVVWRTFLQGCQTYGMIDTQ VLS

Transcript Sequence

Transcript ID	Os01t0754700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:31661724:31664288:-1 gene:Os01g0754700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0754700-01)
Sequence	TTCCTTCCCCTCTTCTGCCGCTGCTGCCACGCGCCGCCTCGACGCCGCCCCGCCTGCTGC GGCGCCGCCGGTCGCCGGGGCGCGCGATTAGCTGTGCGCACCGCGAGCATCTCGTGCCCG TGACGGCACGCCTTTGGCCTTCGCCGGCGCGCCAGGAGTGACACGCCGCTGTCCCCCCCA TGCCGCACCCGGCACCCGCTCGACGGAATGCCGAGCCCGAGTCCGAGCGCGCCGCCCTCC GCTTCCCTCTTCAACTCCCTCATCGCGTCCCGCGCCCGCGCCGGCCGCGCCGCCGAGGGC TTTGCGCTCCTCGCGCGCATGCTCGCCGCGGGCGTCGCCCCGACGGCGTTCACCTTCGCG CCGATCCTCTCCTCGCCTTCGGCCGGCGCCCGCTGCGCGGCGCAGCTGCACCCTCACATC CTCAAGAGCGGGCTGCTCCACAGCGACCCCTACTCCGGGACATCGCTGGTGGGGTTCTTT GGGCGGAATGGCCGGTTTGATGATGCACTCAGGTTGTTCGGCGAAATGCCTGTGCGGAGC GTCGTCACCTGGAACTGTCTCATCTCTTCGTTTGCGCAGCATGGACGTGCCTGCGATGCT GTGATCTGGTTCAGGGCGCTGGTTCGAAGCGGTAACAGCGTGTCTGATGGCTCTCTTGTG GCAGTACTTCCTGCTTTTGGCACACCAGAGCAAGTTCATGGGCTTGTGAAGAAAATTGCG ATAGATTCCTTCTCAACAGTTGCAAACTCATTGCTGAATTCATACTGTACTCACAGTTCC ACGTCTTTGGCAGAGAATCTGTTTAGTGAGTTCATGTTCAGAGACGTGGTTTCTTGGAAT ACAATGATCATTGCCTTCGCTAGGAGAAGCTTGCCTCAGAGAGCCCTTGAATTTTTCTGG ATGATGGAAGGTTGGAGTGTTTTGCCCAATGAAATAACATTTAGCAGTGTAATTTATGCC TGCACCAGTATAAATGGACATGAACATGGGAAGTCCATTCATGCAAAAGTTATCAAACAC AATCTCAATACGAGACCATTTGTGAACACTTCACTGTTTGATTTCTATTCAAAATGTGGT TGTACGAAGGATGCTCACAAAGTTCTTGAAGAAGCTCCTGAGGATAGCACCACACGTTGG AATGGACTGATTTCTTGTCACTCAGATACTGATGTTCCAACGTCGTTTTTTATTCTGAGA GAGATGTTGCGATCTGGTGTTATGCCAAACGAGGTTAGTTTGTCTTCTTTGCTCAAGGAC CCATCAGTATTCGATCTGTTGCAGATTCACTCGTTGGTAACAAGATTGGGTTACGACGGC TATGACTATGTCTCAAGTGCCATTATATCTTCATATGCTTCACATGAAATGGTTTCTGAT GCTTTGGCTTATGGGGGTATGTTAGATCCTGACTCCTGTGCTGTCTCCATGAATGTTTTA GCTGGGGTATATAACAGAGTCCGCATGTATGACGAAGCGAAGAAGCTACTTTTACATCAG GGATGTAATGACACTGTTTCATGGAGCATACTTATCACTGCTTGTGCAAGGAATGGTGAT TATGCTGAAGCTCTTAAATTTTTCGAACTGATGAGAATTTTGGGGCATCATTTTGATAGC TATGTATCTGTGAGCCTGCTAAGCATTTGTACAAAGTCTAATAGCCTTGTTCTTGGTAGG TTGCTTCATGGGCTTATCATCAAGACCAATTCTGGTTGCTTAGATACTTATGTTCATAAT ATGTTGCTAGATATGTATGCTAAGTGCGGTAGAATTGAAGAATGTCTGAAAGCCTTTAAG GAAATGGAAGATAGGAACATTATCTCCTGGACAGCTATAATTTCTGGCCTTGCACTTAAT GGTTTTTCTCGTAAGGCCCTGGCATGGTTTAAAGCCATGGAAGAGGATGGCTTCAAACCT GACAAGGTAGCAATTACAGCAGTCCTTTCAGCTTGTAGGCATGGTGGACTGGTGCATGAA GGAATGAATATATTCAGACATATGAAGTCTGAATATTCAATCGAGCCTGAGATGGAGCAT TACATTTGTGTGGTGGACATGCTATGCAAGTGTGGTCATTTGAAGGAAGCTGAGGTTGTG ATTAGAGGCATGCCATTCCAACCAAGTGCTGTCGTATGGCGCACATTCCTCCAAGGTTGC CAGACATACGGTATGATAGATACTCAAGTACTTAGCTAGCAAATCTGTCATACAAAGTTT GGTTATTTAAAGGAAGCTGAAATTGTTTGTAAAGGCATGCATTTCCAACCAAGGCCTGTC ATATGGTCACATTTCTCCAAGGTTGCCAAACAGATTCACAAATATTTAGCTAGCAATGTT TCAGGTGAAGTTGCATTTGATAAACAATGGAGGTGCGCCTTTTCTTTTTTACATTGACTC GCCAGTTTACCGTATATCACTTCAACATTTGGATCATGGTGGATATCAAATTAGTTTTGG TTGATCCTGTACAAAATAGTTAGTTTCGTCTGTCCTGCAGATTCTTTGTTTATATGATCT TGTAATAGATGGTACATAACTACTAGGCATCTTCATTGATCACTC