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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0752300-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:31559233:31560836:-1 gene:Os01g0752300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RPL18A description:Similar to 60S ribosomal protein L18a-1. (Os01t0752300-01)
Sequence

ATGGGCGCCTTCAGGTTCCACCAGTACCAGGTGGTGGGGAGGGGCCTGCCGACGCCGACC
GACGAGCACCCCAAGATCTACCGCATGAAGCTCTGGGCTACCAACGAGGTCCGCGCCAAG
TCCAAGTTCTGGTACTTCCTCCGCAAGCTGAAGAAGGTGAAGAAGAGCAACGGGCAGATC
CTTGCCATCAACGAGATTTTTGAGAAGAACCCAACAACTATCAAGAACTATGGCATCTGG
CTGCGTTACCAGAGTAGGACTGGCTACCACAACATGTACAAGGAGTACCGTGATACCACC
CTCAATGGTGCCGTTGAGCAGATGTACACTGAGATGGCTTCCCGCCACCGTGTCAGATTC
CCTTGCATTCAGATCATCAAGACTGCTACTGTCCACTTTAAACTCTGCAAGCGTGACAAC
ACTAAGCAGTTCCACAAGTCAGATATCAAGTTCCCACTGGTGTACAGGAAGGTCAGGCCC
CCTACCAGGAAGCTGAAGACAACCTTCAAAGCTTCAAGGCCAAACTTGTTTATGTGA

Peptide Sequence

PEP ID

Os01t0752300-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:31559233:31560836:-1 gene:Os01g0752300 transcript:Os01t0752300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RPL18A description:Similar to 60S ribosomal protein L18a-1. (Os01t0752300-01)
Sequence

MGAFRFHQYQVVGRGLPTPTDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI
LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF
PCIQIIKTATVHFKLCKRDNTKQFHKSDIKFPLVYRKVRPPTRKLKTTFKASRPNLFM

Transcript Sequence

Transcript ID

Os01t0752300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:31559233:31560836:-1 gene:Os01g0752300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RPL18A description:Similar to 60S ribosomal protein L18a-1. (Os01t0752300-01)
Sequence

ACACTCGCCTCCCCTATAAAAGTCCTGGACGCCGCAAAACCTTCCGCGCCGCCGCCATCT
CGGACCACCGTAGCACGCCGCCTCCCCGCCCAGCGACCTCGGCAACTCCGGCGAAGATGG
GCGCCTTCAGGTTCCACCAGTACCAGGTGGTGGGGAGGGGCCTGCCGACGCCGACCGACG
AGCACCCCAAGATCTACCGCATGAAGCTCTGGGCTACCAACGAGGTCCGCGCCAAGTCCA
AGTTCTGGTACTTCCTCCGCAAGCTGAAGAAGGTGAAGAAGAGCAACGGGCAGATCCTTG
CCATCAACGAGATTTTTGAGAAGAACCCAACAACTATCAAGAACTATGGCATCTGGCTGC
GTTACCAGAGTAGGACTGGCTACCACAACATGTACAAGGAGTACCGTGATACCACCCTCA
ATGGTGCCGTTGAGCAGATGTACACTGAGATGGCTTCCCGCCACCGTGTCAGATTCCCTT
GCATTCAGATCATCAAGACTGCTACTGTCCACTTTAAACTCTGCAAGCGTGACAACACTA
AGCAGTTCCACAAGTCAGATATCAAGTTCCCACTGGTGTACAGGAAGGTCAGGCCCCCTA
CCAGGAAGCTGAAGACAACCTTCAAAGCTTCAAGGCCAAACTTGTTTATGTGATCCAAGT
CGCCTTCCATGTTCTGTAAGATCTGCCAGTATGGTGTAGTCGTAGTTCAGAACTTAAGAT
GAATCTTATCCATATGAAGCCTGTTTTTGAAAAGTTCTGGTAGGTCCATGCTGCGGTCTC
TCTAGGTTCTCGTATCGTATCCTGGTATCCTTTTCTTTTGCTTTGTGATCATCTGATGCC
TCATACTGACAATTCCCAGTTTGCGTTGATATTGGTTTACTGAAATATTATAACGTTGCT
ATTTTGCTC