Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0752200-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:31552902:31556837:-1 gene:Os01g0752200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Crotonase, core domain containing protein. (Os01t0752200-01)
Sequence

ATGGCGGAGCCGGAGCAGCAGCAGCAGCAGGCGAATCCCGACGAGGTGGTGCTCGGGCAG
GAGACCGGCGGCGCGAGGGTGGCGATCCTCAACCGGCCGCGCCAGCTGAACGTCATCTCC
GATAGAGTGGTGTATCTCCTCGCCCAGTTCTTGGAGAGCTGGGAGAAAGATGAGGATGCC
AAGCTGGTCATCTTCAAGGGGGCTGGACGTGCATTTTCCGCTGGTGGGGATCTAAAGATG
TTCTATGAAGGAAAATCAGATGACTCCTGTCTCGAGGTTGTTTACAGGATGTATTGGCTT
TGCTACCATATCCACACGTATAAGAAAACCGCGGTGGCTCTTGTTAATGGACTTGTCATG
GGTGGTGGTGCAGCCATGGTTGCTCCACTGAAGTTTGCAGTTGTCACAGAGAAAACAGTC
TTCGCAACCCCTGAGGCTAGTGTTGGATTACACACAGACTGCAGCTTTTCTTATATCCAT
TCTAGACTCCCTGGATATTTAGGGGAGTACCTGGCTTTGACCGGTGCAAGGTTGAATGCA
AAGGAAATGATTGCTGCCGGTCTTGCTACTCATTTTGTTCCTTCTGAAAAATTGGAAGAA
CTTGAAAAATGCCTGCTGAATTTAAACACAGGAGATGAGTCTGCTGTTCGAGCTGCTATT
GAAGAGTTCTCAACTGATGTTCAACCTGATGAAGATAGTATTTTAAACAAGCTCCCAACT
ATCAACAAATGTTTCTCTGCTGAGACTATCGAGGACATCATAAAAGCTTTTGAATCAGAA
GGGAGCATTGATGGAAACCAATGGATCGCTACAGTACTGAAGGGCATGCGAAGATCATCT
CCTACTTCACTGAAGATGACTCTTCGATCGATCAGAGAAGGTCGGAAGCAGAGCCTGCCG
GAATGTTTGAAGAAGGAATTCCGACTTACAATGAACACTCTCCGATCTGTAGTTACTGGC
GATGTCTATGAGGGAATTAGAGCTCTCAGCATCGACAAAGACAATGCCCCTAAGTGGAGT
CCTGCTACCCTTGAGGAGGTCAAGAACGAGGACATCGACCGTCTTTTCGAACCATTCAGT
TCAGAAAAGGAGCTCCAAGTCCCATCTGACGATTCCAACAGATGGAGTGGCAAATTTGAG
CACACAGTCTATGGCAGAACTTCAGAGTAA

Peptide Sequence

PEP ID

Os01t0752200-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:31552902:31556837:-1 gene:Os01g0752200 transcript:Os01t0752200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Crotonase, core domain containing protein. (Os01t0752200-01)
Sequence

MAEPEQQQQQANPDEVVLGQETGGARVAILNRPRQLNVISDRVVYLLAQFLESWEKDEDA
KLVIFKGAGRAFSAGGDLKMFYEGKSDDSCLEVVYRMYWLCYHIHTYKKTAVALVNGLVM
GGGAAMVAPLKFAVVTEKTVFATPEASVGLHTDCSFSYIHSRLPGYLGEYLALTGARLNA
KEMIAAGLATHFVPSEKLEELEKCLLNLNTGDESAVRAAIEEFSTDVQPDEDSILNKLPT
INKCFSAETIEDIIKAFESEGSIDGNQWIATVLKGMRRSSPTSLKMTLRSIREGRKQSLP
ECLKKEFRLTMNTLRSVVTGDVYEGIRALSIDKDNAPKWSPATLEEVKNEDIDRLFEPFS
SEKELQVPSDDSNRWSGKFEHTVYGRTSE

Transcript Sequence

Transcript ID

Os01t0752200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:31552902:31556837:-1 gene:Os01g0752200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Crotonase, core domain containing protein. (Os01t0752200-01)
Sequence

ACCAACCCCGCCTACCGCTCCACCACTACTACTACACCATCCCCTCCACCGGCTCCCCCT
CACCAAACTTCCCTCCACGCCTGCTTCGCCCAACTCGTTCTCTTGGAGCACCTAACTCGA
GCTGAGCTCCCTTCCCGCGGAATTCGGGTCCCTCCCTGATGGCGGAGCCGGAGCAGCAGC
AGCAGCAGGCGAATCCCGACGAGGTGGTGCTCGGGCAGGAGACCGGCGGCGCGAGGGTGG
CGATCCTCAACCGGCCGCGCCAGCTGAACGTCATCTCCGATAGAGTGGTGTATCTCCTCG
CCCAGTTCTTGGAGAGCTGGGAGAAAGATGAGGATGCCAAGCTGGTCATCTTCAAGGGGG
CTGGACGTGCATTTTCCGCTGGTGGGGATCTAAAGATGTTCTATGAAGGAAAATCAGATG
ACTCCTGTCTCGAGGTTGTTTACAGGATGTATTGGCTTTGCTACCATATCCACACGTATA
AGAAAACCGCGGTGGCTCTTGTTAATGGACTTGTCATGGGTGGTGGTGCAGCCATGGTTG
CTCCACTGAAGTTTGCAGTTGTCACAGAGAAAACAGTCTTCGCAACCCCTGAGGCTAGTG
TTGGATTACACACAGACTGCAGCTTTTCTTATATCCATTCTAGACTCCCTGGATATTTAG
GGGAGTACCTGGCTTTGACCGGTGCAAGGTTGAATGCAAAGGAAATGATTGCTGCCGGTC
TTGCTACTCATTTTGTTCCTTCTGAAAAATTGGAAGAACTTGAAAAATGCCTGCTGAATT
TAAACACAGGAGATGAGTCTGCTGTTCGAGCTGCTATTGAAGAGTTCTCAACTGATGTTC
AACCTGATGAAGATAGTATTTTAAACAAGCTCCCAACTATCAACAAATGTTTCTCTGCTG
AGACTATCGAGGACATCATAAAAGCTTTTGAATCAGAAGGGAGCATTGATGGAAACCAAT
GGATCGCTACAGTACTGAAGGGCATGCGAAGATCATCTCCTACTTCACTGAAGATGACTC
TTCGATCGATCAGAGAAGGTCGGAAGCAGAGCCTGCCGGAATGTTTGAAGAAGGAATTCC
GACTTACAATGAACACTCTCCGATCTGTAGTTACTGGCGATGTCTATGAGGGAATTAGAG
CTCTCAGCATCGACAAAGACAATGCCCCTAAGTGGAGTCCTGCTACCCTTGAGGAGGTCA
AGAACGAGGACATCGACCGTCTTTTCGAACCATTCAGTTCAGAAAAGGAGCTCCAAGTCC
CATCTGACGATTCCAACAGATGGAGTGGCAAATTTGAGCACACAGTCTATGGCAGAACTT
CAGAGTAATTGGCAGCAGAAATAGATGTTCATCATCCTCACAAGCATGTTTTAAGTACTC
GTAACCCCATGTATTCTCATACTTCCCTGTATAACATTGTAACACAAAAAATTGAAAATT
ACATAACGCACGAAGCAATAAAGCATCTCAAATGTTTTGTT