Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0749900-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:31394913:31400069:1 gene:Os01g0749900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF250 domain containing protein. (Os01t0749900-01)
Sequence

ATGGGGGACTGCGTCGTCGTCGAGAATGGCCACCCCGTCCCGAAGGAGGAGGACGCGCCG
GTGGTAGCCGTGGAGCGCCTCCCGGAGGGCGCCGGGAAGCCGCGGGAGGAGGGGAGTAGA
GGGCAGAGGAAACAGGGCGGGATCCGCAGGGAGCCGTCGTTCTCGCGGTGGTGCAAGGAC
TGCTCCGCCATGTCCAATGCCCCCCCTGGGGGCGCCTCCCCTGCCTCGGCGGCCAGCGAC
GACGATTCCGAGGAGTTCGAGCTTCCGCTTCTGCCCTCCGATAGTGGCGGCGGCGGCGGC
AGCCACTTGCCGATGGATATTGAGGCGGGGGCAGCGGCGAGATCTGATGACCTCCCGATT
TCGCCGTGGTTGATCGCGAAGGTTATTGCGCTAATTGCGAGTTGGTACACGCTGAGCACC
TGCTTGACGCTGTATAACAAGGAGATGCTGGGGAAGCACATGTGGAAGTTCCCAGCGCCA
TTCCTGATGAACACGGTGCATTTCACGATGCAGGCTGTGGCATCGAGGGTGATCGTATGG
TTCCAGCACCGGGGCCTGGAGGGAGCGGCTAGTGCAATGACATGGAGAGATTACTTTCTG
CGAGTTGTCCCAACAGCTTTGGCTACTGCTCTTGACATAAATTTGAGCAACATTTCACTT
GTTTTCATCACTGTAACATTTGCTACAATGTGTAAATCTGCAGCTCCAATTTTCATTCTT
CTGTTTGCCTTTTTGTTTAGGCTAGAGAAGCCCAGCTTTAACCTTCTTGGAATCATACTG
ATTGTTTCCTTTGGAGTTCTACTAACAGTTGCTAAAGAGACAGAATTCAATCTTTGGGGA
TTTGTATTTATTATGCTTGCTGCTGTTATGTCTGGTTTCCGCTGGTGCATGACACAGATT
CTCCTCCAGAAAGAGGAATATGGATTAAGAAATCCCTTTACGTTGATGAGTTATGTTACC
CCGGTTATGGCAATAACAACTGCAATTCTTTCTATTGCGATGGATCCATGGCACGACGTC
AGGGCAAGCCACTTTTTTGATAATTCAACTCACATAATAAGGAGCAGCTTATTGATGCTT
CTTGGTGGTGCTTTGGCCTTTTTCATGGTTTTGACAGAATATGTTCTGGTTTCTGTAACA
AGTGCTGTAACAGTGACCGTAGCTGGGATTGTGAAGGAAGCGGTCACTATTTTGGTTGCT
GTGCTTTTCTTCAATGATACATTTACCTGGTTAAAGGGGCTTGGGCTGGGAATAATAATA
TTTGGTGTCAGTCTATTCAACTTATACAAGTATCATAGGTTCAAGAAAGGCCATCGTAAT
AAGAATTGTGACAAGAACCCCCAAACTTCTAGCGGTGCTTCAAAATATGTTATCCTTGAT
GATGACGATATGGAAAACCAGGGTAATTCAGGCTGA

Peptide Sequence

PEP ID

Os01t0749900-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:31394913:31400069:1 gene:Os01g0749900 transcript:Os01t0749900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF250 domain containing protein. (Os01t0749900-01)
Sequence

MGDCVVVENGHPVPKEEDAPVVAVERLPEGAGKPREEGSRGQRKQGGIRREPSFSRWCKD
CSAMSNAPPGGASPASAASDDDSEEFELPLLPSDSGGGGGSHLPMDIEAGAAARSDDLPI
SPWLIAKVIALIASWYTLSTCLTLYNKEMLGKHMWKFPAPFLMNTVHFTMQAVASRVIVW
FQHRGLEGAASAMTWRDYFLRVVPTALATALDINLSNISLVFITVTFATMCKSAAPIFIL
LFAFLFRLEKPSFNLLGIILIVSFGVLLTVAKETEFNLWGFVFIMLAAVMSGFRWCMTQI
LLQKEEYGLRNPFTLMSYVTPVMAITTAILSIAMDPWHDVRASHFFDNSTHIIRSSLLML
LGGALAFFMVLTEYVLVSVTSAVTVTVAGIVKEAVTILVAVLFFNDTFTWLKGLGLGIII
FGVSLFNLYKYHRFKKGHRNKNCDKNPQTSSGASKYVILDDDDMENQGNSG

Transcript Sequence

Transcript ID

Os01t0749900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:31394913:31400069:1 gene:Os01g0749900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF250 domain containing protein. (Os01t0749900-01)
Sequence

TCGGGAAGTCGCCGAGACGAGGTGTTCCGATTTTGACTTGCTACCGGAATCCTCGCTGAA
AGCAAAACCCCCATCTCCCGCGGCTTCTCGTCGGCCGCCGCCGCGGTCGCTCGCCGTCGC
CGATGAGATCCATCCACGCCTCTCTTAGATCCAAATTGCTGTAGAGCCGGCCTCATCGCC
GTAGCGCCACCCGCGTCCATGGGGGACTGCGTCGTCGTCGAGAATGGCCACCCCGTCCCG
AAGGAGGAGGACGCGCCGGTGGTAGCCGTGGAGCGCCTCCCGGAGGGCGCCGGGAAGCCG
CGGGAGGAGGGGAGTAGAGGGCAGAGGAAACAGGGCGGGATCCGCAGGGAGCCGTCGTTC
TCGCGGTGGTGCAAGGACTGCTCCGCCATGTCCAATGCCCCCCCTGGGGGCGCCTCCCCT
GCCTCGGCGGCCAGCGACGACGATTCCGAGGAGTTCGAGCTTCCGCTTCTGCCCTCCGAT
AGTGGCGGCGGCGGCGGCAGCCACTTGCCGATGGATATTGAGGCGGGGGCAGCGGCGAGA
TCTGATGACCTCCCGATTTCGCCGTGGTTGATCGCGAAGGTTATTGCGCTAATTGCGAGT
TGGTACACGCTGAGCACCTGCTTGACGCTGTATAACAAGGAGATGCTGGGGAAGCACATG
TGGAAGTTCCCAGCGCCATTCCTGATGAACACGGTGCATTTCACGATGCAGGCTGTGGCA
TCGAGGGTGATCGTATGGTTCCAGCACCGGGGCCTGGAGGGAGCGGCTAGTGCAATGACA
TGGAGAGATTACTTTCTGCGAGTTGTCCCAACAGCTTTGGCTACTGCTCTTGACATAAAT
TTGAGCAACATTTCACTTGTTTTCATCACTGTAACATTTGCTACAATGTGTAAATCTGCA
GCTCCAATTTTCATTCTTCTGTTTGCCTTTTTGTTTAGGCTAGAGAAGCCCAGCTTTAAC
CTTCTTGGAATCATACTGATTGTTTCCTTTGGAGTTCTACTAACAGTTGCTAAAGAGACA
GAATTCAATCTTTGGGGATTTGTATTTATTATGCTTGCTGCTGTTATGTCTGGTTTCCGC
TGGTGCATGACACAGATTCTCCTCCAGAAAGAGGAATATGGATTAAGAAATCCCTTTACG
TTGATGAGTTATGTTACCCCGGTTATGGCAATAACAACTGCAATTCTTTCTATTGCGATG
GATCCATGGCACGACGTCAGGGCAAGCCACTTTTTTGATAATTCAACTCACATAATAAGG
AGCAGCTTATTGATGCTTCTTGGTGGTGCTTTGGCCTTTTTCATGGTTTTGACAGAATAT
GTTCTGGTTTCTGTAACAAGTGCTGTAACAGTGACCGTAGCTGGGATTGTGAAGGAAGCG
GTCACTATTTTGGTTGCTGTGCTTTTCTTCAATGATACATTTACCTGGTTAAAGGGGCTT
GGGCTGGGAATAATAATATTTGGTGTCAGTCTATTCAACTTATACAAGTATCATAGGTTC
AAGAAAGGCCATCGTAATAAGAATTGTGACAAGAACCCCCAAACTTCTAGCGGTGCTTCA
AAATATGTTATCCTTGATGATGACGATATGGAAAACCAGGGTAATTCAGGCTGATGTCAT
CAGAGAGTGGACTATTTGATGGATTTTCATATTCTGGAAATTTAGTTACCTATGCCTCCT
CACAGGTGACTACCATCTATACATCTTGCCTTGGTATCAAGTGCCATCGTTTTTTATCTT
TTCTGTGCTTCCACGACTTAGGGAAGTTGTGTTGTTATTCATGAGGATGAGCATGAACAT
GAACATGACGCAAACAATATTATTGATTAAGAAGACACATTTACACAAGCAGCAGACAAT
CTAGTCGCCAAAGAAAGATTTTCATGTCAACAAAAAAGGTGCAGATATCTGTCAAGAACT
GTGCATAAATAGTATTGTTATATTTGATAATACTTTTCCTCCACTTAGGAATTTGCTAAT
GCTTTCTTTAATTGGAAGAGTAGAGAGCTCAGTTTTGGCCAGTATTGGCACGTGCGCGGA
AGAATAGCATGAGACACCTTTTTCTTCGATAGGAAAATACATTGTTTATATGTAGCAATA
TTGTAATTTATGATTTTCTTTACTTTTAGCTAAATTTACTGCATAGAAATGTGTAAATAT
TACATGATAATAGAATTCTTTTCCCTTATTTTGAGATTATTATATGTTG