Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0749400-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:31373447:31377544:-1 gene:Os01g0749400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TREHALOSE-6-PHOSPHATE SYNTHASE 2 description:HAD-superfamily hydrolase subfamily IIB protein. (Os01t0749400-02)
Sequence	ATGATGTCGCGGTCGTACACCAACCTTCTCGATCTCGCGGAGGGGAACTTCGCGGCGTTG GGCCCGGGAGGCGGCGGCGGCGGGAGGCGGAGGTCGGGGTCGTTCGGGCTGAAGCGGATG TCGCGGGTGATGACGGTGCCCGGGACGCTGTCGGAGCTGGACGGGGAGGACGACTCGGAG CACGCGGCGACGAACAGCGTCGCCTCCGACGTGCCCTCGTCGGTGGCGGGGGATCGAGTC ATAGTGGTCTCCAACCAGCTGCCCGTCGTCGCACGCCGCCGTCCCGACGGCCGCGGGTGG TCCTTCTCATGGGACGACGACTCGCTGCTCCTCCAGCTCCGCGACGGCATTCCCGATGAG ATGGAGGTGTTCTTCGTCGGTTCCCTCCGCGCCGAAATCCCCGTCGCCGACCAGGAAGAG GTCTCCCAGGCGCTGCTCGATCGCTTCCGATGTGCTCCGGTGTTCCTCCCCGACCCCCTC AACGAACGGTTTTACCACCGCTTCTGCAAGCGCCACCTATGGCCTCTGTTCCACTACATG CTCCCTTTCTCCTCCTCCGCATCCCCGAGTCCCTCCTCCTCCTCCTCCTCCTCCTCCTCC CCCTCATCCTCATCCGGCAGTGGCCACTTCGACCGCGGCGCGTGGGAGGCCTACGTGCTC GCGAACAAGTTCTTCTTCGAGAAGGTCGTGGAGGTCATCAACCCAGAAGACGACTACGTA TGGGTTCACGACTACCATCTCATGGCGCTGCCCACCTTCCTTCGCCGCCGCTTCAACCGC CTGCGCATCGGCTTCTTCCTCCACAGCCCCTTCCCCTCGTCGGAGATCTACCGGACCCTC CCTGTTCGCGAGGAGATCCTAAAGGCGCTGCTCAATTGTGACCTTATTGGATTCCACACT TTTGACTATGCCAGACATTTCCTCTCTTGTTGTAGTAGGATGCTGGGAATTGAATACCAG TCAAAGCGTGGATACATTGGGTTGGATTACTTTGGGCGTACCGTTGGGATCAAAATCATG CCAGTGGGAGTTCATATGGGTCAATTGAAGACGGTTCTGAGCTTGCCCGACAGGGAATGG AGGGTCTCCGAGCTGCAGCAGCAATTTGAGGGGAAGACTGTGTTGCTCGGTGTGGATGAC ATGGATATCTTCAAGGGTATCAACTTGAAGCTTCTTGCCTTCGAGAATATGTTGAGGACA CATCCCAAGTGGCAGGGGCGGGCAGTGTTGGTGCAAATTGCTAATCCGGCCCGTGGAAAG GGTAAGGATCTTGAAGCCATCCAGGCTGAGATTCATGAGAGCTGCAAGAGGATTAATGGA GAGTTTGGCCAGTCAGGATACAGCCCTGTTGTCTTCATTGACCGTGATGTGTCAAGTGTG GAGAAGATTGCCTACTACACAATAGCAGAATGTGTGGTGGTGACTGCTGTGAGGGATGGG ATGAACTTGACACCATATGAATATATTGTCTGTAGGCAGGGGTCTGACTCCACATCAGAA GTGAATGGACCAAAGAAGAGCATGCTGGTGGTATCAGAATTCATTGGGTGCTCACCATCT CTGAGTGGTGCTATCCGGGTTAACCCATGGAATATAGAGGCAACCGCAGAGGCACTGAAT GAGGCCATATCAATGTCGGAACAGGAGAAACACCTAAGGCATGAGAAACATTACCGTTAT GTCAGCACCCACGATGTTGCTTATTGGTCGAAAAGTTTCATCCAAGATTTGGAGAGGGCT TGCAAGGACCACTTCAGGAGGACATGTTGGGGCATCGGGTTGGGGTTTGGTTTTAGGGTG GTGGCCTTAGATCCCCATTTCACAAAGCTTAACATGGATTCAATTGTTATGGCTTATGAG CGGTCAGAGAGTAGGGCTATATTTCTTGATTATGATGGAACACTGGTGCCACAGACTTCC ATCAGTAGGACACCTAGTGCGGAAGTTTTGAGGATCATCAATACCCTGTGCTCAGATAGG AGGAACAAAGTTTTTCTTGTCAGTGGGAGACGCAGGGACAAATTGGGAGAATGGTTTTCC TCTTGTCCAGATCTGGGCATTGCAGCAGAGCATGGTTACTTCTTAAGGTGGACTAGAGAC GAAGAGTGGCAAACATGTACCCAGACCTCTGACTTCGGGTGGATGGAAATGGCCAAGCCA GTGATGAATCTGTATACAGAAGCAACTGATGGATCTTACATTGATCCTAAGGAAAGTGCT TTGGTGTGGCATCACCAGGATGCTGACCCAGGATTTGGATCCTCCCAGGCAAAGGAGTTA CTTGATCATCTGGAAAGTGTATTAGCAAATGAACCTGTTTCTGTCAAAAGTGGCCAGTTC ATTGTTGAAGTCAAACCTCAGGGAGTAAGCAAGGGAGTAGTAGCTGAGAAGATACTCGTC TCAATGAAGGAGAGAGGAAAGCAGGCTGACTTTGTATTATGCATTGGTGATGACAGGTCG GATGAGGACATGTTTGAAAACATTGCTGATACCATTAAAAAGGGTATGGTTGCTACAAAC ACATCATTGTTTGCATGCACTGTGGGACAAAAACCAAGCAAGGCCAAATTTTACCTGGAT GATACGTTTGAAGTGGTCACCATGCTGAGCGCACTGGCAGATGCTACTGAACCAGAACCT GAGACTGATCTTACCGATGAGTTTGATGAACTGGCCGTGTCTGTCTCCTCAGTTGATATT GATGATGAACAAACGCCCAGTGATAAACTGATCGGAGGATAG

Peptide Sequence

PEP ID	Os01t0749400-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:31373447:31377544:-1 gene:Os01g0749400 transcript:Os01t0749400-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TREHALOSE-6-PHOSPHATE SYNTHASE 2 description:HAD-superfamily hydrolase subfamily IIB protein. (Os01t0749400-02)
Sequence	MMSRSYTNLLDLAEGNFAALGPGGGGGGRRRSGSFGLKRMSRVMTVPGTLSELDGEDDSE HAATNSVASDVPSSVAGDRVIVVSNQLPVVARRRPDGRGWSFSWDDDSLLLQLRDGIPDE MEVFFVGSLRAEIPVADQEEVSQALLDRFRCAPVFLPDPLNERFYHRFCKRHLWPLFHYM LPFSSSASPSPSSSSSSSSSPSSSSGSGHFDRGAWEAYVLANKFFFEKVVEVINPEDDYV WVHDYHLMALPTFLRRRFNRLRIGFFLHSPFPSSEIYRTLPVREEILKALLNCDLIGFHT FDYARHFLSCCSRMLGIEYQSKRGYIGLDYFGRTVGIKIMPVGVHMGQLKTVLSLPDREW RVSELQQQFEGKTVLLGVDDMDIFKGINLKLLAFENMLRTHPKWQGRAVLVQIANPARGK GKDLEAIQAEIHESCKRINGEFGQSGYSPVVFIDRDVSSVEKIAYYTIAECVVVTAVRDG MNLTPYEYIVCRQGSDSTSEVNGPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEALN EAISMSEQEKHLRHEKHYRYVSTHDVAYWSKSFIQDLERACKDHFRRTCWGIGLGFGFRV VALDPHFTKLNMDSIVMAYERSESRAIFLDYDGTLVPQTSISRTPSAEVLRIINTLCSDR RNKVFLVSGRRRDKLGEWFSSCPDLGIAAEHGYFLRWTRDEEWQTCTQTSDFGWMEMAKP VMNLYTEATDGSYIDPKESALVWHHQDADPGFGSSQAKELLDHLESVLANEPVSVKSGQF IVEVKPQGVSKGVVAEKILVSMKERGKQADFVLCIGDDRSDEDMFENIADTIKKGMVATN TSLFACTVGQKPSKAKFYLDDTFEVVTMLSALADATEPEPETDLTDEFDELAVSVSSVDI DDEQTPSDKLIGG

Transcript Sequence

Transcript ID	Os01t0749400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:31373447:31377544:-1 gene:Os01g0749400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TREHALOSE-6-PHOSPHATE SYNTHASE 2 description:HAD-superfamily hydrolase subfamily IIB protein. (Os01t0749400-02)
Sequence	AGTTGCATTTCCCATTTCGATTCGAGACTCGAAAACCCACCACCCCTCTCTCCCTCCCTC TCGCTCGCCTCGGCTCGGCTCGCCGTCTGTCTCTCTTTCAGATCACATCAAAGCGGGCAC CAGCACCAGCACCAGCACCAACTCCTCTCTAGGGTTTGGTAAAAACCTCCATTTCCTCCG CGGATCGAAGGGAGGCTAGGGTTCCGATCGAGAGGGGAAGCTTTCGGGTACTCGTTTCAG CCATGATGTCGCGGTCGTACACCAACCTTCTCGATCTCGCGGAGGGGAACTTCGCGGCGT TGGGCCCGGGAGGCGGCGGCGGCGGGAGGCGGAGGTCGGGGTCGTTCGGGCTGAAGCGGA TGTCGCGGGTGATGACGGTGCCCGGGACGCTGTCGGAGCTGGACGGGGAGGACGACTCGG AGCACGCGGCGACGAACAGCGTCGCCTCCGACGTGCCCTCGTCGGTGGCGGGGGATCGAG TCATAGTGGTCTCCAACCAGCTGCCCGTCGTCGCACGCCGCCGTCCCGACGGCCGCGGGT GGTCCTTCTCATGGGACGACGACTCGCTGCTCCTCCAGCTCCGCGACGGCATTCCCGATG AGATGGAGGTGTTCTTCGTCGGTTCCCTCCGCGCCGAAATCCCCGTCGCCGACCAGGAAG AGGTCTCCCAGGCGCTGCTCGATCGCTTCCGATGTGCTCCGGTGTTCCTCCCCGACCCCC TCAACGAACGGTTTTACCACCGCTTCTGCAAGCGCCACCTATGGCCTCTGTTCCACTACA TGCTCCCTTTCTCCTCCTCCGCATCCCCGAGTCCCTCCTCCTCCTCCTCCTCCTCCTCCT CCCCCTCATCCTCATCCGGCAGTGGCCACTTCGACCGCGGCGCGTGGGAGGCCTACGTGC TCGCGAACAAGTTCTTCTTCGAGAAGGTCGTGGAGGTCATCAACCCAGAAGACGACTACG TATGGGTTCACGACTACCATCTCATGGCGCTGCCCACCTTCCTTCGCCGCCGCTTCAACC GCCTGCGCATCGGCTTCTTCCTCCACAGCCCCTTCCCCTCGTCGGAGATCTACCGGACCC TCCCTGTTCGCGAGGAGATCCTAAAGGCGCTGCTCAATTGTGACCTTATTGGATTCCACA CTTTTGACTATGCCAGACATTTCCTCTCTTGTTGTAGTAGGATGCTGGGAATTGAATACC AGTCAAAGCGTGGATACATTGGGTTGGATTACTTTGGGCGTACCGTTGGGATCAAAATCA TGCCAGTGGGAGTTCATATGGGTCAATTGAAGACGGTTCTGAGCTTGCCCGACAGGGAAT GGAGGGTCTCCGAGCTGCAGCAGCAATTTGAGGGGAAGACTGTGTTGCTCGGTGTGGATG ACATGGATATCTTCAAGGGTATCAACTTGAAGCTTCTTGCCTTCGAGAATATGTTGAGGA CACATCCCAAGTGGCAGGGGCGGGCAGTGTTGGTGCAAATTGCTAATCCGGCCCGTGGAA AGGGTAAGGATCTTGAAGCCATCCAGGCTGAGATTCATGAGAGCTGCAAGAGGATTAATG GAGAGTTTGGCCAGTCAGGATACAGCCCTGTTGTCTTCATTGACCGTGATGTGTCAAGTG TGGAGAAGATTGCCTACTACACAATAGCAGAATGTGTGGTGGTGACTGCTGTGAGGGATG GGATGAACTTGACACCATATGAATATATTGTCTGTAGGCAGGGGTCTGACTCCACATCAG AAGTGAATGGACCAAAGAAGAGCATGCTGGTGGTATCAGAATTCATTGGGTGCTCACCAT CTCTGAGTGGTGCTATCCGGGTTAACCCATGGAATATAGAGGCAACCGCAGAGGCACTGA ATGAGGCCATATCAATGTCGGAACAGGAGAAACACCTAAGGCATGAGAAACATTACCGTT ATGTCAGCACCCACGATGTTGCTTATTGGTCGAAAAGTTTCATCCAAGATTTGGAGAGGG CTTGCAAGGACCACTTCAGGAGGACATGTTGGGGCATCGGGTTGGGGTTTGGTTTTAGGG TGGTGGCCTTAGATCCCCATTTCACAAAGCTTAACATGGATTCAATTGTTATGGCTTATG AGCGGTCAGAGAGTAGGGCTATATTTCTTGATTATGATGGAACACTGGTGCCACAGACTT CCATCAGTAGGACACCTAGTGCGGAAGTTTTGAGGATCATCAATACCCTGTGCTCAGATA GGAGGAACAAAGTTTTTCTTGTCAGTGGGAGACGCAGGGACAAATTGGGAGAATGGTTTT CCTCTTGTCCAGATCTGGGCATTGCAGCAGAGCATGGTTACTTCTTAAGGTGGACTAGAG ACGAAGAGTGGCAAACATGTACCCAGACCTCTGACTTCGGGTGGATGGAAATGGCCAAGC CAGTGATGAATCTGTATACAGAAGCAACTGATGGATCTTACATTGATCCTAAGGAAAGTG CTTTGGTGTGGCATCACCAGGATGCTGACCCAGGATTTGGATCCTCCCAGGCAAAGGAGT TACTTGATCATCTGGAAAGTGTATTAGCAAATGAACCTGTTTCTGTCAAAAGTGGCCAGT TCATTGTTGAAGTCAAACCTCAGGGAGTAAGCAAGGGAGTAGTAGCTGAGAAGATACTCG TCTCAATGAAGGAGAGAGGAAAGCAGGCTGACTTTGTATTATGCATTGGTGATGACAGGT CGGATGAGGACATGTTTGAAAACATTGCTGATACCATTAAAAAGGGTATGGTTGCTACAA ACACATCATTGTTTGCATGCACTGTGGGACAAAAACCAAGCAAGGCCAAATTTTACCTGG ATGATACGTTTGAAGTGGTCACCATGCTGAGCGCACTGGCAGATGCTACTGAACCAGAAC CTGAGACTGATCTTACCGATGAGTTTGATGAACTGGCCGTGTCTGTCTCCTCAGTTGATA TTGATGATGAACAAACGCCCAGTGATAAACTGATCGGAGGATAGTAGTCAAGGTTGCTTA TATCTGCAGATTGTCATGATTAATTCAACCATCTCTATACAATTTTTGATGAATGTGAAA GCTGGGTACTCAAAGAATGACTAACACCAGGCCCTACGAATGCTCCAGTGTGAAGTTAAT ACCGTGGAGTGCTCGATTCTCCACTGGGGGCAAAAGCCAATACAATCTTGTGCTGGAAAA GTAGGTCCATATGTCCATAGCTGACTTCACTTTTCTTTGCACGTTTCTGTTTTAACTTTT TCCATATCAAGTAAAATGGAAAGCTTCACGGAAGGCAAGTGAATGTATGTATGGCTTGCA CATGAGAAAGTTTCCACGTGCAGCTTGTGATGATGTGATCCCCCCGCATTAACGCGTAAC GCGGTGCATTCTTTTTTTGTACTCTTGAGGTAGTAGCAAATGTGAATGAAGTTTGTGCTC GTTGTTTGATT