Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0746200-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:31205561:31211272:1 gene:Os01g0746200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NUCLEAR PORIN 85 description:Nucleoporin, Common symbiosis signaling (SYM) pathway (Os01t0746200-01);Similar to Nucleoporin. (Os01t0746200-02)
Sequence	ATGTGCTTGCTTCTGATTCTACTATGTTTTGTCAGGTGGCAATATGTGCTTGAATACAGT AAAACCATCGGTAGTCTCCTTGGGAACCCAGATTCTCTTTCTGCTTACATGATTGATGAC CCAAAGATGATCCTTAAGGTCAAGGAGAAGCCTACTAGTTTAAAGGCTGCGTGGGAGTTG CTAGAGATATTCTTTGTTGATAAACAGTTGCAAACTTGGCTTCCAGAGCGTCTTGTTGAT TGGTTAGCCGACTATGACAGCCTCTTGACCAAGACAGAGAACACGATATATCGCACGCTG ATCAATTTCCAGAAAAAGCTCATCAACCTGCAGGTTGTTGAAGATGATCCTGATTATTGG AGTGGATTATCAGCAGCTCTATCGGTTGGATGGCTTGATATTGTGGTGAATATGCTACGT TTTCATGGATCATACCAATTGGATCAGATGGACAGCCGTGAGACAGAAAATGGGTTGGTT GAAGCTGTTGCTGTTCTTGTGTCAACAATGCCACGCATGCGACCAGATTTGCCATCGGGT AAATTAGGCCAGTGTTGTAAAACAAGACCAGATTTTATAAAGGCATTGGAAAAATGGCGA GGTCAAGTAAGTAAACTGGAGTGCAGTGCATTCTGGATTCAGTGCGGTCACCAAAAAACT CGTGATGGTCTGAAGAGTTTGCTTCATATTATGTTGGGGAACATAAAGAACCTCACTGCT TCTACTTCACATTGGCTGGAGCTCTTTGCTTCTCATTTACTTTATATAAGGCCATTCACA GTGGGTTTTGAAGGGATGCATCAGTTAGCACAAAAGTGCATACAGCTTAAACCGTCTGCT GACAATAGCGGATTGACAGGCCTCCTTACTGGTATCCTTTCAGAAAATAGAGAGGTTGTC TTGGCTGAATGCACAAAAAATTTTGGTCCTTGGATGGTCACACATGCTATGGAGCTGCTG ACTGCTGACAATGACTATGCGGATATGATGTTGCATGAAGAGAGGCCTAACTTCGGTGGT ATAAGCATAGAGGAGCTGCACAGGCTTGTTTATGCTCAAGTTTTGTGCTCTCATGCTTTA ACATGGCAGATTGCACCAACTTATCTGTCCTCATGTCTAAACCAAGGCCTAGGGCTGTTG GAGATTCTGCTTCTGAAGCAACCCATACAAGATAATCGTGTTGTATTGAAGACTTTGGAA ATTTGCCGCTTGTATGAGCTGGAGAATGTTAGTACAAATATCATGAAGATTGCTGGCATT TATCATTGGAAACATGGTAGGAAAGGAACTGGAGTTTACTGGTTCCAGCAAGCTAATGAT AAAGTTCGTCTTGACAGAATTGCTCAACAATTATTCGAACATATTGGCAAGTCGGTCACA GATGATAGTTTTAAGCAATGGGAGGGGCTGCTTGAGTTACTAGGTTCTGACATCGGTAGT GCAGGTGGTCTTGAGTTCCTTCACAGGTACCGAGATTTCAAAAGGTCCCTTCAGATGGCA CAAGAAGGAAGGACTGGCGAGTCTGTTCGGCAAACCGTGGAGTTTCTTATACAGCTGATG AGAAATCCTTCTACACCTCAACGTTTCTGGCTACCACTTTTACATGACTCGGTGAGGCTT CTCAATTGCAAACCCTGCCCATTGTTAAATGTTGCTGAAACGACTTTGTTGCTCAACAAG CTACAAGAACTGTCATTGGCCAAACTTCGGCCTGACTTTTCCAACATTCACCTACCAAGC CATGCATTGAACTCCGTCAGATTAGCTCTAGCATCAAACCTTGCGCGTGCAATTCTTGAA GAACCTTAA

Peptide Sequence

PEP ID	Os01t0746200-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:31205561:31211272:1 gene:Os01g0746200 transcript:Os01t0746200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NUCLEAR PORIN 85 description:Nucleoporin, Common symbiosis signaling (SYM) pathway (Os01t0746200-01);Similar to Nucleoporin. (Os01t0746200-02)
Sequence	MCLLLILLCFVRWQYVLEYSKTIGSLLGNPDSLSAYMIDDPKMILKVKEKPTSLKAAWEL LEIFFVDKQLQTWLPERLVDWLADYDSLLTKTENTIYRTLINFQKKLINLQVVEDDPDYW SGLSAALSVGWLDIVVNMLRFHGSYQLDQMDSRETENGLVEAVAVLVSTMPRMRPDLPSG KLGQCCKTRPDFIKALEKWRGQVSKLECSAFWIQCGHQKTRDGLKSLLHIMLGNIKNLTA STSHWLELFASHLLYIRPFTVGFEGMHQLAQKCIQLKPSADNSGLTGLLTGILSENREVV LAECTKNFGPWMVTHAMELLTADNDYADMMLHEERPNFGGISIEELHRLVYAQVLCSHAL TWQIAPTYLSSCLNQGLGLLEILLLKQPIQDNRVVLKTLEICRLYELENVSTNIMKIAGI YHWKHGRKGTGVYWFQQANDKVRLDRIAQQLFEHIGKSVTDDSFKQWEGLLELLGSDIGS AGGLEFLHRYRDFKRSLQMAQEGRTGESVRQTVEFLIQLMRNPSTPQRFWLPLLHDSVRL LNCKPCPLLNVAETTLLLNKLQELSLAKLRPDFSNIHLPSHALNSVRLALASNLARAILE EP

Transcript Sequence

Transcript ID	Os01t0746200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:31205561:31211272:1 gene:Os01g0746200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NUCLEAR PORIN 85 description:Nucleoporin, Common symbiosis signaling (SYM) pathway (Os01t0746200-01);Similar to Nucleoporin. (Os01t0746200-02)
Sequence	AAGTGGGTTCCAACTATATAGAAAGAAAGGATTACTGCCCAAGCTATGCTTGTACTGGGA TAGGCATGTCACATATCGCTCAGAATTTTAAGTTTTAGCAATGCTTTGTTATATTGTTTG TGTTCGATAGCTATCCAACTATTCAGATACCCTTTTTCATATTGTAGAAGCTGAATTTGT AGCTCTTAGGCTTCCGCCTAAATGGATAAATCGACATATCTGAAGTACACATATGGTTAA ATTTTAAACATCTGTGCCAAAGTGGTATTATAATCACTGTTTATACAGTTAATCTAGATC AAACCTCTGCCTAGTATAAGCTATCCATTTTTTCCATGTGCTTGCTTCTGATTCTACTAT GTTTTGTCAGGTGGCAATATGTGCTTGAATACAGTAAAACCATCGGTAGTCTCCTTGGGA ACCCAGATTCTCTTTCTGCTTACATGATTGATGACCCAAAGATGATCCTTAAGGTCAAGG AGAAGCCTACTAGTTTAAAGGCTGCGTGGGAGTTGCTAGAGATATTCTTTGTTGATAAAC AGTTGCAAACTTGGCTTCCAGAGCGTCTTGTTGATTGGTTAGCCGACTATGACAGCCTCT TGACCAAGACAGAGAACACGATATATCGCACGCTGATCAATTTCCAGAAAAAGCTCATCA ACCTGCAGGTTGTTGAAGATGATCCTGATTATTGGAGTGGATTATCAGCAGCTCTATCGG TTGGATGGCTTGATATTGTGGTGAATATGCTACGTTTTCATGGATCATACCAATTGGATC AGATGGACAGCCGTGAGACAGAAAATGGGTTGGTTGAAGCTGTTGCTGTTCTTGTGTCAA CAATGCCACGCATGCGACCAGATTTGCCATCGGGTAAATTAGGCCAGTGTTGTAAAACAA GACCAGATTTTATAAAGGCATTGGAAAAATGGCGAGGTCAAGTAAGTAAACTGGAGTGCA GTGCATTCTGGATTCAGTGCGGTCACCAAAAAACTCGTGATGGTCTGAAGAGTTTGCTTC ATATTATGTTGGGGAACATAAAGAACCTCACTGCTTCTACTTCACATTGGCTGGAGCTCT TTGCTTCTCATTTACTTTATATAAGGCCATTCACAGTGGGTTTTGAAGGGATGCATCAGT TAGCACAAAAGTGCATACAGCTTAAACCGTCTGCTGACAATAGCGGATTGACAGGCCTCC TTACTGGTATCCTTTCAGAAAATAGAGAGGTTGTCTTGGCTGAATGCACAAAAAATTTTG GTCCTTGGATGGTCACACATGCTATGGAGCTGCTGACTGCTGACAATGACTATGCGGATA TGATGTTGCATGAAGAGAGGCCTAACTTCGGTGGTATAAGCATAGAGGAGCTGCACAGGC TTGTTTATGCTCAAGTTTTGTGCTCTCATGCTTTAACATGGCAGATTGCACCAACTTATC TGTCCTCATGTCTAAACCAAGGCCTAGGGCTGTTGGAGATTCTGCTTCTGAAGCAACCCA TACAAGATAATCGTGTTGTATTGAAGACTTTGGAAATTTGCCGCTTGTATGAGCTGGAGA ATGTTAGTACAAATATCATGAAGATTGCTGGCATTTATCATTGGAAACATGGTAGGAAAG GAACTGGAGTTTACTGGTTCCAGCAAGCTAATGATAAAGTTCGTCTTGACAGAATTGCTC AACAATTATTCGAACATATTGGCAAGTCGGTCACAGATGATAGTTTTAAGCAATGGGAGG GGCTGCTTGAGTTACTAGGTTCTGACATCGGTAGTGCAGGTGGTCTTGAGTTCCTTCACA GGTACCGAGATTTCAAAAGGTCCCTTCAGATGGCACAAGAAGGAAGGACTGGCGAGTCTG TTCGGCAAACCGTGGAGTTTCTTATACAGCTGATGAGAAATCCTTCTACACCTCAACGTT TCTGGCTACCACTTTTACATGACTCGGTGAGGCTTCTCAATTGCAAACCCTGCCCATTGT TAAATGTTGCTGAAACGACTTTGTTGCTCAACAAGCTACAAGAACTGTCATTGGCCAAAC TTCGGCCTGACTTTTCCAACATTCACCTACCAAGCCATGCATTGAACTCCGTCAGATTAG CTCTAGCATCAAACCTTGCGCGTGCAATTCTTGAAGAACCTTAAGTAATAGTTCTATTTG GGGTATGAGTGCCACATCCACTTTGCTGGAAGTTTGACGGCGTTAATCGTCAGTTGATTA CCAGTAACTGTATGTTCCTTGGGAAGAGGTTGAACTTGTGTTCACTCTGAATGAGCAAAG GTTGAACTTGTGTTCCTTCATGAATGAGCAATTGTGTCATGCATGTATATGTACCGGACA TTGTATTTTTAGCTTTAGTGATACCTTAGATGTTACTTATGTACAAAGAAATGCTAGTAA ATGTATTTTAGAATGGGCACAATATTGTATTCCTTGTTTCTTCCTCTATTTCTTTTGGGG TGAATAACTCTTTATGGTGAC