Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0744200-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:31108317:31110074:1 gene:Os01g0744200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0744200-01)
Sequence

ATGAGATCAGCTATGGCTACTGCATCGGTGGTTACCTATCTTCAGAGGCCGAGAGAGCTT
CCGGTGCCGGAGTTCCGGGCACCGCCGCCGTCTCCGGTCACCGGCGTCCTCACGAGCAGT
AGCTCCGGCTCTCTTGCATACGGCGAGTGCCCCGATAGCAACGAAGACGACGAGATCGGC
AGGTTCTTGCGCCGCTCCGCCAGAGTCCCGGTGCTGCGGCTGCCGGAGAGGGCCGTCCCG
CGGAAGAAGAAAGCGGCGTGGGCACCTCCGGTCATCGACGTGCGCCTGCTGGCCTTGCCG
GAGGCCGGCGGTCCGGTGGCGGAGGCGCTGAGGTCGGCAGCCGTCGCGTTTGGCTGCTTC
CAGGTGGTCGGCCATGGGGTCGACCGGAGCTTGGTCTCAGCAGCGTTGCGTCATGTGGCA
GCTGCAACTGCAAGGGCAGCGACGCCGGAGCCGGAGGAGGTGGAGGTCAACGGAGACGAT
GAGAACGGTGAGGAGATGTGGTGGTCGCCTGGTGACGGAGGCCAAGAAATGGCGGGAAAT
TGGGCGCTCCAAAGTGGCGCCAGCCACTTCAGGAACACAGCAGACGCTTTGTTCATTCAG
CTGGAGCAAACCGCAACCAAAATAATGGACGTCCTGCAGCGAGGCGGCGCCGTTGCCACG
CAATCCATCGCCGGAGCTGACACAAACGGCTCGCTCCTCTGCATCCGCAAGCACCGCCGC
AGGCAAGACGACCGCAGCGGCGGCGCCTCTGGCCCGATCCGCCACGACGACATCCTGAGG
ATGCTGGTCCGGAGCTCGCGGTGCTCGCGGGCCCTCGCCCTCCACCTCTGCCCCGGCGCC
TCGGCGTTCCACATCTTCTCCCGGCGAGGCTGGTCCAGATTCAGGCCCATGGACGGCGCC
GTCGTCGTCACCGTCGGCGACCAGCTCCAGGCATGCAACGGTGGGCTCTACAAGAGCGTG
GCCGGGAAGCCAGCGTACAGCAATGACGACCTCCGAGGAAACGGCGGCGACACCGGTGTC
GCCTCCGCGGAGTTGTTCTACTGCTTCCCTTCGGCCGGCACGGCGGCTGGCAAGGCGAGC
GAGGTGTTGAGCGCGGATGCCGGCAAGATCATCCCGTTGAACCTGCAGTTCATGGTGGCT
GCTTGCCTTGTGCTTGGATACCACTTTCTCCTGTCAAGCTTGCATTCGACTTGGTTGTTG
TGA

Peptide Sequence

PEP ID

Os01t0744200-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:31108317:31110074:1 gene:Os01g0744200 transcript:Os01t0744200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0744200-01)
Sequence

MRSAMATASVVTYLQRPRELPVPEFRAPPPSPVTGVLTSSSSGSLAYGECPDSNEDDEIG
RFLRRSARVPVLRLPERAVPRKKKAAWAPPVIDVRLLALPEAGGPVAEALRSAAVAFGCF
QVVGHGVDRSLVSAALRHVAAATARAATPEPEEVEVNGDDENGEEMWWSPGDGGQEMAGN
WALQSGASHFRNTADALFIQLEQTATKIMDVLQRGGAVATQSIAGADTNGSLLCIRKHRR
RQDDRSGGASGPIRHDDILRMLVRSSRCSRALALHLCPGASAFHIFSRRGWSRFRPMDGA
VVVTVGDQLQACNGGLYKSVAGKPAYSNDDLRGNGGDTGVASAELFYCFPSAGTAAGKAS
EVLSADAGKIIPLNLQFMVAACLVLGYHFLLSSLHSTWLL

Transcript Sequence

Transcript ID

Os01t0744200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:31108317:31110074:1 gene:Os01g0744200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0744200-01)
Sequence

ATGCCAACGCGAATCACATAAGAGTTCAAGCCAAAGCTAAGAGGCCATGAGATCAGCTAT
GGCTACTGCATCGGTGGTTACCTATCTTCAGAGGCCGAGAGAGCTTCCGGTGCCGGAGTT
CCGGGCACCGCCGCCGTCTCCGGTCACCGGCGTCCTCACGAGCAGTAGCTCCGGCTCTCT
TGCATACGGCGAGTGCCCCGATAGCAACGAAGACGACGAGATCGGCAGGTTCTTGCGCCG
CTCCGCCAGAGTCCCGGTGCTGCGGCTGCCGGAGAGGGCCGTCCCGCGGAAGAAGAAAGC
GGCGTGGGCACCTCCGGTCATCGACGTGCGCCTGCTGGCCTTGCCGGAGGCCGGCGGTCC
GGTGGCGGAGGCGCTGAGGTCGGCAGCCGTCGCGTTTGGCTGCTTCCAGGTGGTCGGCCA
TGGGGTCGACCGGAGCTTGGTCTCAGCAGCGTTGCGTCATGTGGCAGCTGCAACTGCAAG
GGCAGCGACGCCGGAGCCGGAGGAGGTGGAGGTCAACGGAGACGATGAGAACGGTGAGGA
GATGTGGTGGTCGCCTGGTGACGGAGGCCAAGAAATGGCGGGAAATTGGGCGCTCCAAAG
TGGCGCCAGCCACTTCAGGAACACAGCAGACGCTTTGTTCATTCAGCTGGAGCAAACCGC
AACCAAAATAATGGACGTCCTGCAGCGAGGCGGCGCCGTTGCCACGCAATCCATCGCCGG
AGCTGACACAAACGGCTCGCTCCTCTGCATCCGCAAGCACCGCCGCAGGCAAGACGACCG
CAGCGGCGGCGCCTCTGGCCCGATCCGCCACGACGACATCCTGAGGATGCTGGTCCGGAG
CTCGCGGTGCTCGCGGGCCCTCGCCCTCCACCTCTGCCCCGGCGCCTCGGCGTTCCACAT
CTTCTCCCGGCGAGGCTGGTCCAGATTCAGGCCCATGGACGGCGCCGTCGTCGTCACCGT
CGGCGACCAGCTCCAGGCATGCAACGGTGGGCTCTACAAGAGCGTGGCCGGGAAGCCAGC
GTACAGCAATGACGACCTCCGAGGAAACGGCGGCGACACCGGTGTCGCCTCCGCGGAGTT
GTTCTACTGCTTCCCTTCGGCCGGCACGGCGGCTGGCAAGGCGAGCGAGGTGTTGAGCGC
GGATGCCGGCAAGATCATCCCGTTGAACCTGCAGTTCATGGTGGCTGCTTGCCTTGTGCT
TGGATACCACTTTCTCCTGTCAAGCTTGCATTCGACTTGGTTGTTGTGATTTGTGAAATA
CAGGACCTGTTCTCTG