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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0743800-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:31093047:31094953:1 gene:Os01g0743800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PSEUDO-PHOSPHOTRANSFER PROTEIN 1 description:Similar to histidine-containing phosphotransfer protein 4. (Os01t0743800-00)
Sequence

ATGGATTATTCTAATTTGCGTCGCCAAGCTGCATCCATGAAAAAGAGCCTCTTTGATCAG
GGATACCTAGATGAGCAATTTTGTCAGGTGGAAGATTTGCAGGATGAAGCTAGTCCTAAT
TTTGTGGAAGAAGTTGTTACTTTGTTTTTTAAGGACTCGGGCAGGCTAATGTCAAACATT
GAGCAAGCTCTGGAGAAGTACCCAAGAGATTTCAACAGGTGGGATACATATATGCAGCAA
CTAAAAGGCAGCTGTTCCAGCATCGGCGCTTCTAGGATGAAGAATGAGTGCATGTCGTTC
AGGGATAGTTGTGGCCAAGGAAATGTTGAAGGTTGCATGAGGTCTTTCCAGAAAGTGAAG
CGGGAGCATGCTGTCCTGAGGCAGAAACTAGAATCCTATTTCCAGCTGCTAAGACAAGCT
GGCCCCGCTGGAGCTGCCACTAGGCCTGTCATGTAA

Peptide Sequence

PEP ID

Os01t0743800-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:31093047:31094953:1 gene:Os01g0743800 transcript:Os01t0743800-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PSEUDO-PHOSPHOTRANSFER PROTEIN 1 description:Similar to histidine-containing phosphotransfer protein 4. (Os01t0743800-00)
Sequence

MDYSNLRRQAASMKKSLFDQGYLDEQFCQVEDLQDEASPNFVEEVVTLFFKDSGRLMSNI
EQALEKYPRDFNRWDTYMQQLKGSCSSIGASRMKNECMSFRDSCGQGNVEGCMRSFQKVK
REHAVLRQKLESYFQLLRQAGPAGAATRPVM

Transcript Sequence

Transcript ID

Os01t0743800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:31093047:31094953:1 gene:Os01g0743800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PSEUDO-PHOSPHOTRANSFER PROTEIN 1 description:Similar to histidine-containing phosphotransfer protein 4. (Os01t0743800-00)
Sequence

GCTCCCACAAGTCATATGTTCATCATTAAGTGTGTTCCAACCTGTAACGGCTTCACTTTG
TCACATATTTCCTCATTCATTCATATAAATGGATTATTCTAATTTGCGTCGCCAAGCTGC
ATCCATGAAAAAGAGCCTCTTTGATCAGGGATACCTAGATGAGCAATTTTGTCAGGTGGA
AGATTTGCAGGATGAAGCTAGTCCTAATTTTGTGGAAGAAGTTGTTACTTTGTTTTTTAA
GGACTCGGGCAGGCTAATGTCAAACATTGAGCAAGCTCTGGAGAAGTACCCAAGAGATTT
CAACAGGTGGGATACATATATGCAGCAACTAAAAGGCAGCTGTTCCAGCATCGGCGCTTC
TAGGATGAAGAATGAGTGCATGTCGTTCAGGGATAGTTGTGGCCAAGGAAATGTTGAAGG
TTGCATGAGGTCTTTCCAGAAAGTGAAGCGGGAGCATGCTGTCCTGAGGCAGAAACTAGA
ATCCTATTTCCAGCTGCTAAGACAAGCTGGCCCCGCTGGAGCTGCCACTAGGCCTGTCAT
GTAAGAACCGGCTATTCGCATTCTGCAAGGCGCACTGCTGCTCTTCCAGCATCTTCGATA
TGCTGGTCCTGCTGACATTATAACTAGGCCAGCATATAAGTTTGTAGCCTGTCGGTACCC
GACGCCTCTACGGCAATAGCCAATGGATGTGCCACACTTAAATACGCTTGTATAAGTATT
AAAGTGAAATAAGAAGAGATGACAGACTGGATGTACTATCGTGTAAGTAATACGAGCATG
AAACATGATATCACTTACTGGTTT