Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0743500-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:31076571:31081251:1 gene:Os01g0743500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cytosolic NADP malic enzyme 3, endosperm-specific gene 13 description:Cytosolic NADP malic enzyme. (Os01t0743500-01)
Sequence	ATGGCGGGGCGAGGAGAGGGGAACGGCGCTGCGACGATGGCGGGGGTGGCCACCGGTGGC GTGGAGGACGCCTACGGCGAGGACCGCGCCACCGAGGACCAGCCCATCACGCCGTGGGCC GTCTGCGTCGCCAGCGGTCACTCTCTGCTGAGGGATCCACGGCACAACAAGGGGCTATCA TTCACGGAGAAAGAGCGAGACGCCCACTACCTGCGGGGTTTGCTGCCTCCAGTCGTGCTC TCCCAAGAACTTCAGGAGAAGAGGCTTCTGCAAAATGTGCGGCAGTTTCAGGTTCCTCTG CAACGTTACATGGCTCTGATGGACCTTCAGGAGAGGAATGAGAGGCTTTTCTACAAGCTC CTGATCGACAACGTTGAGGAATTGCTCCCCGTTGTGTACACGCCGACGGTGGGCGAGGCT TGCCAGAAGTACGGGTCAATCTTTAGACGACCACAGGGTCTGTACATCAGTCTTAAAGAG AAGGGGAGAATATTGGAGTTACTGAGGAACTGGCCAGAGAAGAGCATTCAGGTTATTGTT GTTACTGATGGTGAGCGCATTTTAGGTCTCGGGGATCTTGGTTGCCAGGGTATGGGAATC CCTGTGGGAAAGCTTGCACTATACACAGCCCTTGGAGGTGTCCGGCCTTCTGCTTGCTTA CCTATCACCATTGATGTGGGAACAAACAATGAGGATTTACTGAAGGACGAGTTCTACATT GGATTAAGACAAAAACGAGCCACTGGCCAGGAATATAGTGATCTTCTGGATGAATTCATG GCTGCTATTAAGCAGAACTATGGACAGAAGGTGCTAGTCCAGTTTGAAGACTTCGCAAAT TACAATGCATTTACCCTTCTTGAGAAGTACCGTGCAAACAATCTTGTCTTCAATGATGAT ATTCAGGGAACGGCTGCTGTAGTGCTTGCAGGCCTCATTGCTGCTCAGAAATTTGTCAGT GGGACTTTAGCTGATCACACATTCTTATTCTTTGGCGCAGGAGAGGCTGGTACAGGCATT GCTGAACTAGTGGCTCTCGAGATATCAAATCAGTCCAAAGTTCCAGTGGAAGATGCTCGC AAAAAGATCTGGCTACTTGATTCAAAGGGGTTGATTGTCAGTTCACGTAAAGATTCTCTT CAGCCCTTTAAGAAGCGATATGCCCATGAGCATGAACCAGTCAAAGATCTACTGGATGCT GTTAAGGTTATCAAACCGACTGCATTGATAGGTTCAGCTGGTGTGGGTCAAAGTTTCACA AAAGAGGTGATTGAGGCTATGAGTTCAATTAATGAGAGACCAATCATCCTCGCACTATCC AATCCAACATCACAATCTGAATGTACTGCTGAACAGGCATATTCATGGAGTAAGGGCCGT GCAATATTTGGGAGTGGAAGTCCATTTGATCCAGTTAAATACAATGACAAGCTTTTCGTG CCTGCACAGGCAAACAATGCATATATATTCCCAGGATTTGGCCTAGGCGTAGTGATTTCA GGAGCGATAAGGGTGAAAGATGAAATGATCCTTGCTGCTGCTGAAGGCTTAGCTGACCAG GTGACCCCAGAGCATGTTGACAAAGGCCTTATTTATCCACCCTTTTCCTGCATCAGGAAG ATATCAGCCAACATCGCAGCCCGCGTTGCTGCAAAAGCCTATGACCTTGGATTGGCTAGC CATCTCCCTCGCCCAAAAGACTTGGTGAAGTACGCTGAGAGCTGCATGTACAGCCCCATT TACCGTTCTTATAGATGA

Peptide Sequence

PEP ID	Os01t0743500-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:31076571:31081251:1 gene:Os01g0743500 transcript:Os01t0743500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cytosolic NADP malic enzyme 3, endosperm-specific gene 13 description:Cytosolic NADP malic enzyme. (Os01t0743500-01)
Sequence	MAGRGEGNGAATMAGVATGGVEDAYGEDRATEDQPITPWAVCVASGHSLLRDPRHNKGLS FTEKERDAHYLRGLLPPVVLSQELQEKRLLQNVRQFQVPLQRYMALMDLQERNERLFYKL LIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGRILELLRNWPEKSIQVIV VTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACLPITIDVGTNNEDLLKDEFYI GLRQKRATGQEYSDLLDEFMAAIKQNYGQKVLVQFEDFANYNAFTLLEKYRANNLVFNDD IQGTAAVVLAGLIAAQKFVSGTLADHTFLFFGAGEAGTGIAELVALEISNQSKVPVEDAR KKIWLLDSKGLIVSSRKDSLQPFKKRYAHEHEPVKDLLDAVKVIKPTALIGSAGVGQSFT KEVIEAMSSINERPIILALSNPTSQSECTAEQAYSWSKGRAIFGSGSPFDPVKYNDKLFV PAQANNAYIFPGFGLGVVISGAIRVKDEMILAAAEGLADQVTPEHVDKGLIYPPFSCIRK ISANIAARVAAKAYDLGLASHLPRPKDLVKYAESCMYSPIYRSYR

Transcript Sequence

Transcript ID	Os01t0743500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:31076571:31081251:1 gene:Os01g0743500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cytosolic NADP malic enzyme 3, endosperm-specific gene 13 description:Cytosolic NADP malic enzyme. (Os01t0743500-01)
Sequence	GGCCTCCAGCTACTACGCGTCGTGGCTTCTCGCGCTGCATTCCGAGAGACGACGAAGCGG TGGTGGTGGTGGCGGCGGCGCTGCAGGCAAGGCGCGAGGACGGTGAGCGGCATGGCGGGG CGAGGAGAGGGGAACGGCGCTGCGACGATGGCGGGGGTGGCCACCGGTGGCGTGGAGGAC GCCTACGGCGAGGACCGCGCCACCGAGGACCAGCCCATCACGCCGTGGGCCGTCTGCGTC GCCAGCGGTCACTCTCTGCTGAGGGATCCACGGCACAACAAGGGGCTATCATTCACGGAG AAAGAGCGAGACGCCCACTACCTGCGGGGTTTGCTGCCTCCAGTCGTGCTCTCCCAAGAA CTTCAGGAGAAGAGGCTTCTGCAAAATGTGCGGCAGTTTCAGGTTCCTCTGCAACGTTAC ATGGCTCTGATGGACCTTCAGGAGAGGAATGAGAGGCTTTTCTACAAGCTCCTGATCGAC AACGTTGAGGAATTGCTCCCCGTTGTGTACACGCCGACGGTGGGCGAGGCTTGCCAGAAG TACGGGTCAATCTTTAGACGACCACAGGGTCTGTACATCAGTCTTAAAGAGAAGGGGAGA ATATTGGAGTTACTGAGGAACTGGCCAGAGAAGAGCATTCAGGTTATTGTTGTTACTGAT GGTGAGCGCATTTTAGGTCTCGGGGATCTTGGTTGCCAGGGTATGGGAATCCCTGTGGGA AAGCTTGCACTATACACAGCCCTTGGAGGTGTCCGGCCTTCTGCTTGCTTACCTATCACC ATTGATGTGGGAACAAACAATGAGGATTTACTGAAGGACGAGTTCTACATTGGATTAAGA CAAAAACGAGCCACTGGCCAGGAATATAGTGATCTTCTGGATGAATTCATGGCTGCTATT AAGCAGAACTATGGACAGAAGGTGCTAGTCCAGTTTGAAGACTTCGCAAATTACAATGCA TTTACCCTTCTTGAGAAGTACCGTGCAAACAATCTTGTCTTCAATGATGATATTCAGGGA ACGGCTGCTGTAGTGCTTGCAGGCCTCATTGCTGCTCAGAAATTTGTCAGTGGGACTTTA GCTGATCACACATTCTTATTCTTTGGCGCAGGAGAGGCTGGTACAGGCATTGCTGAACTA GTGGCTCTCGAGATATCAAATCAGTCCAAAGTTCCAGTGGAAGATGCTCGCAAAAAGATC TGGCTACTTGATTCAAAGGGGTTGATTGTCAGTTCACGTAAAGATTCTCTTCAGCCCTTT AAGAAGCGATATGCCCATGAGCATGAACCAGTCAAAGATCTACTGGATGCTGTTAAGGTT ATCAAACCGACTGCATTGATAGGTTCAGCTGGTGTGGGTCAAAGTTTCACAAAAGAGGTG ATTGAGGCTATGAGTTCAATTAATGAGAGACCAATCATCCTCGCACTATCCAATCCAACA TCACAATCTGAATGTACTGCTGAACAGGCATATTCATGGAGTAAGGGCCGTGCAATATTT GGGAGTGGAAGTCCATTTGATCCAGTTAAATACAATGACAAGCTTTTCGTGCCTGCACAG GCAAACAATGCATATATATTCCCAGGATTTGGCCTAGGCGTAGTGATTTCAGGAGCGATA AGGGTGAAAGATGAAATGATCCTTGCTGCTGCTGAAGGCTTAGCTGACCAGGTGACCCCA GAGCATGTTGACAAAGGCCTTATTTATCCACCCTTTTCCTGCATCAGGAAGATATCAGCC AACATCGCAGCCCGCGTTGCTGCAAAAGCCTATGACCTTGGATTGGCTAGCCATCTCCCT CGCCCAAAAGACTTGGTGAAGTACGCTGAGAGCTGCATGTACAGCCCCATTTACCGTTCT TATAGATGAAGTGATGCTCACCTTAGTGTACAGCTTCATTTGGCTACAGCATGCTGTCTT GTATTACAGTAATAATTTGCGGTTGGACCTATATCGTACGGCAGTAGCATTTTATCCCTG AACTGTGCTTGTACATATTTGCCCTGTCATCATGTAATAAATAACCCAAGTCTGCTATTG CAGAATTTGGTTCAG