Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0742500-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:31009626:31013954:-1 gene:Os01g0742500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEXOKINASE-6 description:Similar to Hexokinase. (Os01t0742500-01)
Sequence

ATGGGGAAGGGGACGGTAGTGGGGACGGCGGTGGTGGTGTGCGCTGCAGCGGCCGCGGCG
GTTGGGGTGGCGGTGGTGGTGTCGCGGAGGAGGAGGAGCAAGCGGGAGGCGGAGGAGGAG
CGGCGGAGGAGGGCCGCCGCTGTGATCGAGGAGGTGGAGCAGAGGTTCTCGACGCCCACG
GCGCTGCTGCGCGGCATCGCGGACGCCATGGTGGAGGAGATGGAGCGCGGCCTCCGCGCC
GACCCTCACGCCCCGCTCAAGATGCTCATCAGCTACGTCGACAACCTCCCCACCGGGGAT
GAGCACGGACTGTTCTATGCTCTCGATCTTGGGGGCACCAATTTCCGTGTTATACGTGTT
CAGCTTGGAGGAAGGGAAAAGCGTGTTGTTAGTCAACAGTACGAAGAGGTTGCCATTCCA
CCTCACCTGATGGTTGGGACTTCTATGGAACTGTTTGACTTCATTGCGGCTGAGTTGGAA
AGTTTTGTCAAGACCGAGGGAGAGGATTTCCACTTGCCAGAGGGCAGGCAGAGAGAGTTA
GGCTTCACCTTTTCTTTCCCAGTGCACCAAACATCAATATCATCAGGCACTCTTATTAAG
TGGACAAAGGGATTTTCCATCAATGGCACGGTGGGGGAAGATGTTGTGGCTGAATTGAGC
AGGGCTATGGAAAGGCAAGGGCTTGATATGAAAGTTACAGCTCTTGTTAATGACACTGTA
GGCACATTGGCTGGCGGAAGATATGTTGATAATGACGTTGCTGCTGCTGTAATATTAGGC
ACTGGCACAAACGCAGCCTACGTGGAGCATGCAAATGCAATTCCAAAATGGACTGGATTA
CTACCTAGATCAGGAAATATGGTGATTAACATGGAATGGGGAAACTTCAAGTCAGAAAGG
CTTCCTCGTTCAGATTACGATAATGCCTTGGACTTTGAAAGTTTAAACCCAGGCGAGCAG
ATATATGAAAAGATGATTTCCGGCATGTATCTTGGAGAGATTGTGCGCAGAATCTTGCTT
AAGCTTGCTCATGATGCTTCCTTGTTTGGAGATGTTGTTCCAACAAAGCTGGAGCAGCGC
TTTATACTGAGGACGCCGGACATGTCAGCGATGCATCATGATACCTCACATGATCTGAAA
CACCTGGGAGCTAAGCTGAAGGATATCCTGGGGGTCGCTGATACTTCCCTGGAAGCACGA
TACATCACCCTTCATGTCTGCGACCTCGTTGCAGAGAGAGGTGCACGCTTAGCTGCTGCT
GGTATATATGGCATTCTAAAGAAGCTGGGCAGGGACAGAGTGCCAAGTGACGGTAGTCAA
AAGCAGAGGACTGTCATTGCTCTGGATGGTGGTCTCTATGAGCATTACAAGAAGTTCAGA
ACCTGCCTAGAAGCAACGCTTGCAGACCTGCTTGGAGAGGAGGCTGCCTCATCAGTTGTT
GTCAAGTTGGCAAACGATGGCTCTGGCATCGGAGCTGCACTTCTTGCAGCATCTCACTCC
CAGTATGCTAGCGTCGAGTAG

Peptide Sequence

PEP ID

Os01t0742500-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:31009626:31013954:-1 gene:Os01g0742500 transcript:Os01t0742500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEXOKINASE-6 description:Similar to Hexokinase. (Os01t0742500-01)
Sequence

MGKGTVVGTAVVVCAAAAAAVGVAVVVSRRRRSKREAEEERRRRAAAVIEEVEQRFSTPT
ALLRGIADAMVEEMERGLRADPHAPLKMLISYVDNLPTGDEHGLFYALDLGGTNFRVIRV
QLGGREKRVVSQQYEEVAIPPHLMVGTSMELFDFIAAELESFVKTEGEDFHLPEGRQREL
GFTFSFPVHQTSISSGTLIKWTKGFSINGTVGEDVVAELSRAMERQGLDMKVTALVNDTV
GTLAGGRYVDNDVAAAVILGTGTNAAYVEHANAIPKWTGLLPRSGNMVINMEWGNFKSER
LPRSDYDNALDFESLNPGEQIYEKMISGMYLGEIVRRILLKLAHDASLFGDVVPTKLEQR
FILRTPDMSAMHHDTSHDLKHLGAKLKDILGVADTSLEARYITLHVCDLVAERGARLAAA
GIYGILKKLGRDRVPSDGSQKQRTVIALDGGLYEHYKKFRTCLEATLADLLGEEAASSVV
VKLANDGSGIGAALLAASHSQYASVE

Transcript Sequence

Transcript ID

Os01t0742500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:31009626:31013954:-1 gene:Os01g0742500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEXOKINASE-6 description:Similar to Hexokinase. (Os01t0742500-01)
Sequence

AGAGGAGAGAGACTGAGGGAGGGAGGCAGGAGGAAGGAGGAGGAGGAGGACGCTGCAGTG
GTGGGTGGCGTAGCTCCCGATCCGGGAAGCCGACCCGGTCTGGGGGATTTGCTCCTGGCG
CGCGCTCGATCGAGAGGGAGGCCAGGGTTGGGTTGGGGGGAGCGTGAAGAAGCGCGCGCG
CGGCTATGGGGAAGGGGACGGTAGTGGGGACGGCGGTGGTGGTGTGCGCTGCAGCGGCCG
CGGCGGTTGGGGTGGCGGTGGTGGTGTCGCGGAGGAGGAGGAGCAAGCGGGAGGCGGAGG
AGGAGCGGCGGAGGAGGGCCGCCGCTGTGATCGAGGAGGTGGAGCAGAGGTTCTCGACGC
CCACGGCGCTGCTGCGCGGCATCGCGGACGCCATGGTGGAGGAGATGGAGCGCGGCCTCC
GCGCCGACCCTCACGCCCCGCTCAAGATGCTCATCAGCTACGTCGACAACCTCCCCACCG
GGGATGAGCACGGACTGTTCTATGCTCTCGATCTTGGGGGCACCAATTTCCGTGTTATAC
GTGTTCAGCTTGGAGGAAGGGAAAAGCGTGTTGTTAGTCAACAGTACGAAGAGGTTGCCA
TTCCACCTCACCTGATGGTTGGGACTTCTATGGAACTGTTTGACTTCATTGCGGCTGAGT
TGGAAAGTTTTGTCAAGACCGAGGGAGAGGATTTCCACTTGCCAGAGGGCAGGCAGAGAG
AGTTAGGCTTCACCTTTTCTTTCCCAGTGCACCAAACATCAATATCATCAGGCACTCTTA
TTAAGTGGACAAAGGGATTTTCCATCAATGGCACGGTGGGGGAAGATGTTGTGGCTGAAT
TGAGCAGGGCTATGGAAAGGCAAGGGCTTGATATGAAAGTTACAGCTCTTGTTAATGACA
CTGTAGGCACATTGGCTGGCGGAAGATATGTTGATAATGACGTTGCTGCTGCTGTAATAT
TAGGCACTGGCACAAACGCAGCCTACGTGGAGCATGCAAATGCAATTCCAAAATGGACTG
GATTACTACCTAGATCAGGAAATATGGTGATTAACATGGAATGGGGAAACTTCAAGTCAG
AAAGGCTTCCTCGTTCAGATTACGATAATGCCTTGGACTTTGAAAGTTTAAACCCAGGCG
AGCAGATATATGAAAAGATGATTTCCGGCATGTATCTTGGAGAGATTGTGCGCAGAATCT
TGCTTAAGCTTGCTCATGATGCTTCCTTGTTTGGAGATGTTGTTCCAACAAAGCTGGAGC
AGCGCTTTATACTGAGGACGCCGGACATGTCAGCGATGCATCATGATACCTCACATGATC
TGAAACACCTGGGAGCTAAGCTGAAGGATATCCTGGGGGTCGCTGATACTTCCCTGGAAG
CACGATACATCACCCTTCATGTCTGCGACCTCGTTGCAGAGAGAGGTGCACGCTTAGCTG
CTGCTGGTATATATGGCATTCTAAAGAAGCTGGGCAGGGACAGAGTGCCAAGTGACGGTA
GTCAAAAGCAGAGGACTGTCATTGCTCTGGATGGTGGTCTCTATGAGCATTACAAGAAGT
TCAGAACCTGCCTAGAAGCAACGCTTGCAGACCTGCTTGGAGAGGAGGCTGCCTCATCAG
TTGTTGTCAAGTTGGCAAACGATGGCTCTGGCATCGGAGCTGCACTTCTTGCAGCATCTC
ACTCCCAGTATGCTAGCGTCGAGTAGTAACAGGAGCTCATGGGACTGAGCTCCCAGTGTA
GCTTGTTTTCCTCCCATTTTCCCCGTTTCTTTCCAATGGGAGTTCGTTTCCCTCCTGCGA
TTCGCATCTCCTTTTGCTATTCTGCAGTCACATAAACGAGTGCCTGTGCAGCGGGATGTA
GCTAGTATGGCGCCAAAGAGTTTGCAGTTATCACATGAACAAGCATTTGCAACTGCAGGG
AAGTGAAAACGGGGGCTTGAATGATGCCGTTCTTTTCCTGCAAATTATTTTCCCCCTTTC
CCTGTAAGTTTGTATTGTGATGCGATGTCGCAAACCAATCACAGCGGTTTCGCGTGTAGC
CTTTTGTCATTCAGATTTCAGAATAAAGAGGGGGACATAATTTCACTTTTCGTATGTCAG
TTTGAACTATGTATGTACTCTTACACACTGGTATCAAAGCTCAAATGATCTGATC