Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0739500-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:30885172:30886338:-1 gene:Os01g0739500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0739500-01)
Sequence

ATGGGCAAATTCGGTGGAGCTGCGGTCCTTCCAGTATACCGTGAAGAAGAAGATGAAGAC
TTGTTCGAGACATCATCGTCCATCTCAGGCGACTCCGATGATGAGGCTCAATTTTCAGAC
AGCGAGGAAGCTGAAGCTCAAGAAGACCAGTTTGCGCAGCAGCCAGCGAGAAGGATGAAT
TCAGATAGCCTCTACGATCTGTCATCTATGAAGGCACAACTCCCTGTCAAGAAAGGATTA
TCCAAATACTACGACGGAAAGTCTCAATCTTTTGCATGTATGTCTGAGGTGAGATGCCTA
GAGGATCTACGCAAGAAGGAGAATCCATACAAGAAGATCAAATCATCCAAGAGCTATGTA
GCACTGGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCACATCAATAGCC
AAGAAGTCTGGAAGTTCTTGCGCAAATCTGATGGCCAGGAATAACACCAAAAGCATGCTC
TATAGGCCTCCCCCAATTCCTGTAAACAAAAGCGGATATCATCAGTAG

Peptide Sequence

PEP ID

Os01t0739500-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:30885172:30886338:-1 gene:Os01g0739500 transcript:Os01t0739500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0739500-01)
Sequence

MGKFGGAAVLPVYREEEDEDLFETSSSISGDSDDEAQFSDSEEAEAQEDQFAQQPARRMN
SDSLYDLSSMKAQLPVKKGLSKYYDGKSQSFACMSEVRCLEDLRKKENPYKKIKSSKSYV
ALDGNQEACHIPGANSTSIAKKSGSSCANLMARNNTKSMLYRPPPIPVNKSGYHQ

Transcript Sequence

Transcript ID

Os01t0739500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:30885172:30886338:-1 gene:Os01g0739500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0739500-01)
Sequence

GTAAAGATTGTGAAAGAGAGGAAGCAAGAGAGGAAGAAGAATATATCCATAGTTCTATAC
ACAAAGCGTACCTGTTCTTTCGGTGTCTTTGTTCCAGAAGCCAGAAAAACTGCGAGCATG
GGCAAATTCGGTGGAGCTGCGGTCCTTCCAGTATACCGTGAAGAAGAAGATGAAGACTTG
TTCGAGACATCATCGTCCATCTCAGGCGACTCCGATGATGAGGCTCAATTTTCAGACAGC
GAGGAAGCTGAAGCTCAAGAAGACCAGTTTGCGCAGCAGCCAGCGAGAAGGATGAATTCA
GATAGCCTCTACGATCTGTCATCTATGAAGGCACAACTCCCTGTCAAGAAAGGATTATCC
AAATACTACGACGGAAAGTCTCAATCTTTTGCATGTATGTCTGAGGTGAGATGCCTAGAG
GATCTACGCAAGAAGGAGAATCCATACAAGAAGATCAAATCATCCAAGAGCTATGTAGCA
CTGGATGGGAACCAGGAAGCTTGTCATATACCTGGCGCAAACAGCACATCAATAGCCAAG
AAGTCTGGAAGTTCTTGCGCAAATCTGATGGCCAGGAATAACACCAAAAGCATGCTCTAT
AGGCCTCCCCCAATTCCTGTAAACAAAAGCGGATATCATCAGTAGGAACAGTATCGAAAT
GTTTTTTTTTTGGGGGGTCAGGGTTTCATCTCTGTTCTTTTTTCGTTGAGGATTTTGTTG
ACAAGCATATTAGCCTGTCACGGATGTAAGAGGATTTCGTTCTCTGCCATATACAGAGAG
TCGTCTTGTTCAAGGAGACATCGATTCTGTTTGTAAATACTACAATGAAATTTTTCATTG
GACTGCCTGGGGATGATGAACAGCCTTCTGTCGAAATTTAAAGCATATGTCTGCAGTACA
TCCAATTGCCTTGGTTAAAAGAAGAAGAAGAACAGCTTAACGTTAAGGGAGTCCTTTGGT
CATCAAAGATGAAAACAAAAGGAATTCAATTCTATAAATATTCCAGACACACAAATTGTA
GCATGGCTGGTCATGAATGTTTGCCAAACCAAAAAATGAACCGAAGCC