Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0737900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:30779393:30782726:1 gene:Os01g0737900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0737900-01)
Sequence	ATGGCCGCCATGGTTGGAGCACGCAGGGCCCTCCTAGCTGCCCGTTACTCGCCTCGCGGC GCGCTCGCTTCGCCCGTCCGTCGCGTGGATTCGCCGCCCAGTCTTCCAGCTGACAGAGGT TGTCTGTGGCCTTTGGTTCCACATCGAGGCGCTGGCAATTTCGCATCAGAACAGATCGAT GGGGACTATCACCGCGAATGGGGAGCACGTAATGATGGGAACTACAGGGAGCCCCATCGA ACTGATAGTCTCAGCCACCAAGTTCAGGCAAATCTCCCTTCAACTGATTCCTCTGTAGGA GCTGATAGAATTAGAGGTGTGAGTGGTGATGGAAGTGTCAATGCTAATTACAGACGCAAT CCTGGGCAACCGGAGTTTCCAAATCGTCATGAGCCGTACAGTAGTGCAAGGGTGAATAAT GGAGCATCTGGATATAATGACAGGCAACCCTATGGCAGTGCCAATGCACAGTACAGAAGC AATTCTGCGCAGCCTTCCCAAACAGGTGGACCATATGGATTTGCGAATCGTAATGAGCCA TATACTAGTGCAAGAGTGAATTATGAAGCACCTGGATACAATGACAAGCAACCTTATGGT GGTGGTACTACATACAACCAGCAAATCGCTAATGGGGATCTACCAAATTCCCAGTATAGC CGCAGACAAGGTAATAATAGTGGCGTTTCTGGATATGGTACAGGGCATCATTATCATGGA TCTGACACATACAGATCTGGCTACAACACCCAAAATAACCAGCAGGCATATGATAGTAGG CAGTATGGATATGGCCCTTCAGGACAATCATATCAAGAATCAACTGGAAATGATCAGCAA GTCTTTCAACAACAGGAAGTTGATCAAAGATCTGCTGGCAATTATGCAAATAGGCCTGGT TCTACCTCAGAATATCCAAATCCAAGTAGATTCAATAAGGAACATGCTGCAAATTTTCAG CAAGGCTACAATGGTGGTATTGGACATAATGTTTCACATGCACCTCAGAGCCCTTACGTC AGTAGCAAAATTGATGCACAAGGTAATTTTCCAGGGCAACCCATGAATGTAAACAGATCT GTGCAACACAATACTCATGCACCTGCACTGTATCAAGATGGCATATACCGCAATCCACTA ACTGATAGCCCGTCAATTGATGGGTTACCTTCTGGAGCATCTGATGTAACCAGTGGAGAA TCCAAAGTTACTGTTGAAGAGATGGATAAGTTATGTGAAGATGGCAAAGTAAAAGAAGCT GTGGAACTTCTGGCTTTGCTACAGGAAGAAGGAACTGTAGTGCATGCTCCTCAATATTTT AAATTGATGCAAGCATGTGGTGATGCAACTTCTCTTGCAGAAGCAAGAAAAATACATAAT CAAATATCTCAATCAGCACTTGCTGTTGACACAGATATTAACAACAAAATTTTGGAGATG TATGCTAAATGTGGGTCAATGGAAGATGCGAAGAAGCTATTCAATACTATAGCTCAACGT AATTTGGCATCATGGAACACTATAATCTCAGGTTTTGTGTATAATGGTCTTGGTGACGAA GCAACTGATTTTTTTGATCAGTTTAAGCAGACAGGTAATAAGCCAGATTCAACCATGTTC ACACATGTTTTCTTGGCATGTGGAATTTTGGGTTCTGTTGATGAGGGGATGTTGCATTTT GAATCAATGCAAAAGGACTTTGGTGTAACTCCCACCATGGAACATTATGTCAGCATTGTT AATATGCTTGGGCAGTCTGGCTATATTGATGAAGCTTGTGAATTTGTTGAACAAATGCCT GTGGAACCGAGCATTGATGTCTGGGAAAGTTTGATGAATATGTGTCGACTAAATGGCTTT TTGGAGCTAGGAAATCGCTGTGCTCAAATTGTAGAGCGATTGGATTCTTCTAGGCTAAAT GACCAGTCTAAAATTGGTCTTTTCCCTGTTGATGCTTCAGAACTTGCAAAGGAGAAAGAA AGAAAAAAGGCTAATGCTGTTGAAGCTAGGAGCAAAGTTCATGAATACAGAGCAGGAGAT AGGTCCCATCCTGAACATCTTAAGATCTATGAAGAGCTGAGATACTTAGCAGCTCATATG AAAGAGGCTGGCTATATTGCAGATACTCGATTTGTGCTTCATGATGTTGATCAAGAAACT AAAGAGGATGCTTTACTAGCTCATAGTGAGAGGCTAGCTGTCAGTTATGGTCTTATAACT AGTGCTGCTCGGTCACCTATTCGGGTTATAAAGAATCTACGCTCATGTGGAGATTGTCAT ACAGCTTTGAAGATAATCTCTAAACTCGTTGGTCGTTTGATCATTGCAAGGGATGCAAAG AGATTTCACCATTTTGAGAATGGTGTATGCTCTTGCAAAGACTATTGGTAA

Peptide Sequence

PEP ID	Os01t0737900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:30779393:30782726:1 gene:Os01g0737900 transcript:Os01t0737900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0737900-01)
Sequence	MAAMVGARRALLAARYSPRGALASPVRRVDSPPSLPADRGCLWPLVPHRGAGNFASEQID GDYHREWGARNDGNYREPHRTDSLSHQVQANLPSTDSSVGADRIRGVSGDGSVNANYRRN PGQPEFPNRHEPYSSARVNNGASGYNDRQPYGSANAQYRSNSAQPSQTGGPYGFANRNEP YTSARVNYEAPGYNDKQPYGGGTTYNQQIANGDLPNSQYSRRQGNNSGVSGYGTGHHYHG SDTYRSGYNTQNNQQAYDSRQYGYGPSGQSYQESTGNDQQVFQQQEVDQRSAGNYANRPG STSEYPNPSRFNKEHAANFQQGYNGGIGHNVSHAPQSPYVSSKIDAQGNFPGQPMNVNRS VQHNTHAPALYQDGIYRNPLTDSPSIDGLPSGASDVTSGESKVTVEEMDKLCEDGKVKEA VELLALLQEEGTVVHAPQYFKLMQACGDATSLAEARKIHNQISQSALAVDTDINNKILEM YAKCGSMEDAKKLFNTIAQRNLASWNTIISGFVYNGLGDEATDFFDQFKQTGNKPDSTMF THVFLACGILGSVDEGMLHFESMQKDFGVTPTMEHYVSIVNMLGQSGYIDEACEFVEQMP VEPSIDVWESLMNMCRLNGFLELGNRCAQIVERLDSSRLNDQSKIGLFPVDASELAKEKE RKKANAVEARSKVHEYRAGDRSHPEHLKIYEELRYLAAHMKEAGYIADTRFVLHDVDQET KEDALLAHSERLAVSYGLITSAARSPIRVIKNLRSCGDCHTALKIISKLVGRLIIARDAK RFHHFENGVCSCKDYW

Transcript Sequence

Transcript ID	Os01t0737900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:30779393:30782726:1 gene:Os01g0737900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0737900-01)
Sequence	GAGGAGAGGCAGTCGCTCCTTCTGCTTGGCGGCTGGACTGGAGAACGAACGGCCGCCGCA TCGTCGCGAGGTTTTTAGGGGAGGGAGCCGCCGGAGAAGGGGGAGGAGAGGAGGAGCGCG CCGAGGTCGGAGGGAGGAAGGAGGAGGAGAGAGATGGCCGCCATGGTTGGAGCACGCAGG GCCCTCCTAGCTGCCCGTTACTCGCCTCGCGGCGCGCTCGCTTCGCCCGTCCGTCGCGTG GATTCGCCGCCCAGTCTTCCAGCTGACAGAGGTTGTCTGTGGCCTTTGGTTCCACATCGA GGCGCTGGCAATTTCGCATCAGAACAGATCGATGGGGACTATCACCGCGAATGGGGAGCA CGTAATGATGGGAACTACAGGGAGCCCCATCGAACTGATAGTCTCAGCCACCAAGTTCAG GCAAATCTCCCTTCAACTGATTCCTCTGTAGGAGCTGATAGAATTAGAGGTGTGAGTGGT GATGGAAGTGTCAATGCTAATTACAGACGCAATCCTGGGCAACCGGAGTTTCCAAATCGT CATGAGCCGTACAGTAGTGCAAGGGTGAATAATGGAGCATCTGGATATAATGACAGGCAA CCCTATGGCAGTGCCAATGCACAGTACAGAAGCAATTCTGCGCAGCCTTCCCAAACAGGT GGACCATATGGATTTGCGAATCGTAATGAGCCATATACTAGTGCAAGAGTGAATTATGAA GCACCTGGATACAATGACAAGCAACCTTATGGTGGTGGTACTACATACAACCAGCAAATC GCTAATGGGGATCTACCAAATTCCCAGTATAGCCGCAGACAAGGTAATAATAGTGGCGTT TCTGGATATGGTACAGGGCATCATTATCATGGATCTGACACATACAGATCTGGCTACAAC ACCCAAAATAACCAGCAGGCATATGATAGTAGGCAGTATGGATATGGCCCTTCAGGACAA TCATATCAAGAATCAACTGGAAATGATCAGCAAGTCTTTCAACAACAGGAAGTTGATCAA AGATCTGCTGGCAATTATGCAAATAGGCCTGGTTCTACCTCAGAATATCCAAATCCAAGT AGATTCAATAAGGAACATGCTGCAAATTTTCAGCAAGGCTACAATGGTGGTATTGGACAT AATGTTTCACATGCACCTCAGAGCCCTTACGTCAGTAGCAAAATTGATGCACAAGGTAAT TTTCCAGGGCAACCCATGAATGTAAACAGATCTGTGCAACACAATACTCATGCACCTGCA CTGTATCAAGATGGCATATACCGCAATCCACTAACTGATAGCCCGTCAATTGATGGGTTA CCTTCTGGAGCATCTGATGTAACCAGTGGAGAATCCAAAGTTACTGTTGAAGAGATGGAT AAGTTATGTGAAGATGGCAAAGTAAAAGAAGCTGTGGAACTTCTGGCTTTGCTACAGGAA GAAGGAACTGTAGTGCATGCTCCTCAATATTTTAAATTGATGCAAGCATGTGGTGATGCA ACTTCTCTTGCAGAAGCAAGAAAAATACATAATCAAATATCTCAATCAGCACTTGCTGTT GACACAGATATTAACAACAAAATTTTGGAGATGTATGCTAAATGTGGGTCAATGGAAGAT GCGAAGAAGCTATTCAATACTATAGCTCAACGTAATTTGGCATCATGGAACACTATAATC TCAGGTTTTGTGTATAATGGTCTTGGTGACGAAGCAACTGATTTTTTTGATCAGTTTAAG CAGACAGGTAATAAGCCAGATTCAACCATGTTCACACATGTTTTCTTGGCATGTGGAATT TTGGGTTCTGTTGATGAGGGGATGTTGCATTTTGAATCAATGCAAAAGGACTTTGGTGTA ACTCCCACCATGGAACATTATGTCAGCATTGTTAATATGCTTGGGCAGTCTGGCTATATT GATGAAGCTTGTGAATTTGTTGAACAAATGCCTGTGGAACCGAGCATTGATGTCTGGGAA AGTTTGATGAATATGTGTCGACTAAATGGCTTTTTGGAGCTAGGAAATCGCTGTGCTCAA ATTGTAGAGCGATTGGATTCTTCTAGGCTAAATGACCAGTCTAAAATTGGTCTTTTCCCT GTTGATGCTTCAGAACTTGCAAAGGAGAAAGAAAGAAAAAAGGCTAATGCTGTTGAAGCT AGGAGCAAAGTTCATGAATACAGAGCAGGAGATAGGTCCCATCCTGAACATCTTAAGATC TATGAAGAGCTGAGATACTTAGCAGCTCATATGAAAGAGGCTGGCTATATTGCAGATACT CGATTTGTGCTTCATGATGTTGATCAAGAAACTAAAGAGGATGCTTTACTAGCTCATAGT GAGAGGCTAGCTGTCAGTTATGGTCTTATAACTAGTGCTGCTCGGTCACCTATTCGGGTT ATAAAGAATCTACGCTCATGTGGAGATTGTCATACAGCTTTGAAGATAATCTCTAAACTC GTTGGTCGTTTGATCATTGCAAGGGATGCAAAGAGATTTCACCATTTTGAGAATGGTGTA TGCTCTTGCAAAGACTATTGGTAAACACAATATAGCAAACCTACATTGTTCAATTTTGAG GTACAAAACCACAATAGGTTGTGTAAATCCAGAAGGTAGGCTGTTGCCTAACACTTAGCT AGCCACTAGTTTCATGTCAGGCACATGTATGCTTTTTCTTTGAATGCTCATTCTCTTTTG CTTTTCTTTTGGTGATTTATTATTCAGGAAATCAAGCGTTTGAACTTGAACAATCTTACA TGCTGCCTTTCAGTGGCACTTCTTCTCTAGGAGGCCATCTAAATTCGCTGTATGTGTCAC TGCAAAATGGTTCTATAAACATGCTTTTGTGCT