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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0736900-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:30739585:30740615:1 gene:Os01g0736900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon family protein. (Os01t0736900-01);Similar to seed maturation protein. (Os01t0736900-02)
Sequence

TCCAATGCCTCCACTTTCATCCACAAGTCCCCTCCAAACATTCCTGAGGTGAAAATTCCA
GAGGACTTGACAGTAAACATTGCCCTTTCTCTGAGATATGAGATCAATAGAGGTTTTGCA
ACCTTGAGGGAGATTGGTCATGGCCGTGATCTGAAGAAGTTCCTCATTGTGATCGCTGGA
CTCTGGATTCTGTCAGTTCTTGGTAGCAGCTGTAACTTTTTGACTTTGTTCTACATAGTT
TTTGTGGCGCTCTACACTGTGCCAGTACTGTATGAGAAGTATGAGGACAAGGTTGATGCT
TTTGGTGAGAAGGCTGAGATTGAATTTAAGAAGTACTATGCCCTCTTTGAAGAGAAATGC
CTATCGAAGATTCCCAAGGGTCCTTTGAAAGATAAGAAGCACTAG

Peptide Sequence

PEP ID

Os01t0736900-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:30739585:30740615:1 gene:Os01g0736900 transcript:Os01t0736900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon family protein. (Os01t0736900-01);Similar to seed maturation protein. (Os01t0736900-02)
Sequence

SNASTFIHKSPPNIPEVKIPEDLTVNIALSLRYEINRGFATLREIGHGRDLKKFLIVIAG
LWILSVLGSSCNFLTLFYIVFVALYTVPVLYEKYEDKVDAFGEKAEIEFKKYYALFEEKC
LSKIPKGPLKDKKH

Transcript Sequence

Transcript ID

Os01t0736900-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:30739585:30740615:1 gene:Os01g0736900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Reticulon family protein. (Os01t0736900-01);Similar to seed maturation protein. (Os01t0736900-02)
Sequence

GGTCCAATGCCTCCACTTTCATCCACAAGTCCCCTCCAAACATTCCTGAGGTGAAAATTC
CAGAGGACTTGACAGTAAACATTGCCCTTTCTCTGAGATATGAGATCAATAGAGGTTTTG
CAACCTTGAGGGAGATTGGTCATGGCCGTGATCTGAAGAAGTTCCTCATTGTGATCGCTG
GACTCTGGATTCTGTCAGTTCTTGGTAGCAGCTGTAACTTTTTGACTTTGTTCTACATAG
TTTTTGTGGCGCTCTACACTGTGCCAGTACTGTATGAGAAGTATGAGGACAAGGTTGATG
CTTTTGGTGAGAAGGCTGAGATTGAATTTAAGAAGTACTATGCCCTCTTTGAAGAGAAAT
GCCTATCGAAGATTCCCAAGGGTCCTTTGAAAGATAAGAAGCACTAGATTAGTAGAAGGT
ACCTGCAATGAATCAGCAGCCGTGTTAATCACTATTGCTCGACTTTTATTTTGGAGGATG
GTTATGAGTCCTTGTGTGTGTGTCTAGTTGATAATATATACTTGCATGGGCAGTTCTAGC
CTTCTAGCATGGCTGATAGTTGTTATGTGGTGGCAGATGGTTGTGGCGTGCAATCTTTTG
TGGAGTTGAGCAATGCTGGCTCAAATCTGCTGATCTTTTCCCCCCTTTCATGTTCAACTT
TAAGCATAGTTACTATATCTGGATGCTAGAAGTATTATGGTACTATCAATGCCCCAAGTG
AACCTTGTGAT