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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0734100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:30608366:30610446:1 gene:Os01g0734100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein L20. (Os01t0734100-01)
Sequence

ATGAACAAGGGCAAGATTTTCAAGTTGGCAAAGGGATTTAGAGGCAGGGCGAAAAATTGC
ATAAGGATAGCAAGGGAGAGGGTTGAGAAAGCCTTGCAATATTCCTACAGGGATAGACAT
AACAAGAAGAGGGATATGCGATCCCTTTGGATAGAGCGTATCAATGCTGGTACACGATTG
CATGGGGTGAACTATGGAAATTTCATGCATGGATTGATGAAGGAGAACATCCAGCTCAAC
CGGAAGGTGCTCTCAGAGCTTTCTATGCATGAGCCCTACAGCTTCAAGGCACTTGTTGAT
GTATCCCGCAGTGCATTTCCAGGGAACAGGCCGCCTGTTAAAAAGGAGGGTCTAGCAGCC
ATCCTGTGA

Peptide Sequence

PEP ID

Os01t0734100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:30608366:30610446:1 gene:Os01g0734100 transcript:Os01t0734100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein L20. (Os01t0734100-01)
Sequence

MNKGKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRHNKKRDMRSLWIERINAGTRL
HGVNYGNFMHGLMKENIQLNRKVLSELSMHEPYSFKALVDVSRSAFPGNRPPVKKEGLAA
IL

Transcript Sequence

Transcript ID

Os01t0734100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:30608366:30610446:1 gene:Os01g0734100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein L20. (Os01t0734100-01)
Sequence

CTACGATTCACAGGCACACAGCACGAGCATCCGCCGCCGCCGCCGCCTCGCCTTAGCCTT
GCCGCCTCGTTCCGGCGAGCAGCAGCCACCCGGCGGCCGGTCCACCACGCAGACGCAGTG
ACTCTTCGACGGTCGGGAAGGGAGAAAAGGCTTCTGGGTGAATCTTCTATTATTAGAAAA
TGAACAAGGGCAAGATTTTCAAGTTGGCAAAGGGATTTAGAGGCAGGGCGAAAAATTGCA
TAAGGATAGCAAGGGAGAGGGTTGAGAAAGCCTTGCAATATTCCTACAGGGATAGACATA
ACAAGAAGAGGGATATGCGATCCCTTTGGATAGAGCGTATCAATGCTGGTACACGATTGC
ATGGGGTGAACTATGGAAATTTCATGCATGGATTGATGAAGGAGAACATCCAGCTCAACC
GGAAGGTGCTCTCAGAGCTTTCTATGCATGAGCCCTACAGCTTCAAGGCACTTGTTGATG
TATCCCGCAGTGCATTTCCAGGGAACAGGCCGCCTGTTAAAAAGGAGGGTCTAGCAGCCA
TCCTGTGAAATGATTATGTTCAGTCGCACACTGCACTCATGATGGCCGTTGCAACTGAAA
GTTACTACTATTATTGTCTTTTAGCTCAAAGGTGACTCATGTAATTCTCCCTTACCTATA
TTAAATATTTATGTTATTTTGTGTGATGTTCTCTGTAGCAGGAAACATCTAATTGCATTA
TTGTTTATCTGGCCCCTTTCTGTTAGTCTTATGGAGAGTGTTATTCCTTTACTGTTGACA
ATTTCAGCAACAGTACTATGGATTTGGTCATAATATATGCAAAGAGTCATGACTTTGTCA
TT