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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0731000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:30501605:30507193:-1 gene:Os01g0731000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ubiquitin domain containing 1. (Os01t0731000-01)
Sequence

ATGGGTTGCGCCGGATCCACACCTAAAACCGATGATAACAGCAAGAAGCTGAAAAAGCCC
AAGCCTTGGAAGCACAATCAAGCAATAACAACAACACAACTCAAACAGATGCGTGATGAA
TTCTGGGACACTGCTCCACATTATGGTGGGCAGAAAGAGATTTGGGATGCGCTTCGAGCT
GCTGCAGAAGCTGAGTTATCTCTTGCACAAACGATAGTGGACAGTGCCGGAATCATTGTA
TCAAATTCTGACATGACAATTTGCTACGATGAAAGAGGTGCCAAATATGAATTACCAAAG
TATGTTCTGAGTGAGCCAACAAATTTGATCAGGGAAGGCTAA

Peptide Sequence

PEP ID

Os01t0731000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:30501605:30507193:-1 gene:Os01g0731000 transcript:Os01t0731000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ubiquitin domain containing 1. (Os01t0731000-01)
Sequence

MGCAGSTPKTDDNSKKLKKPKPWKHNQAITTTQLKQMRDEFWDTAPHYGGQKEIWDALRA
AAEAELSLAQTIVDSAGIIVSNSDMTICYDERGAKYELPKYVLSEPTNLIREG

Transcript Sequence

Transcript ID

Os01t0731000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:30501605:30507193:-1 gene:Os01g0731000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ubiquitin domain containing 1. (Os01t0731000-01)
Sequence

GCTGCTCCACTTCCCCCCTTTTAATCCACCGCTTTTTCTCTCGCATCGTCCTCTCCCCCG
AACCCGCAGCCGCCAATCCACACGCCAGAAGCCGCGCCAGCTTCCAGAAGCTTCCCCAGG
GGGAAGGTCGCTCTCACTCATGAGCGTCTGACCGGCCGTCGCCATGGGTTGCGCCGGATC
CACACCTAAAACCGATGATAACAGCAAGAAGCTGAAAAAGCCCAAGCCTTGGAAGCACAA
TCAAGCAATAACAACAACACAACTCAAACAGATGCGTGATGAATTCTGGGACACTGCTCC
ACATTATGGTGGGCAGAAAGAGATTTGGGATGCGCTTCGAGCTGCTGCAGAAGCTGAGTT
ATCTCTTGCACAAACGATAGTGGACAGTGCCGGAATCATTGTATCAAATTCTGACATGAC
AATTTGCTACGATGAAAGAGGTGCCAAATATGAATTACCAAAGTATGTTCTGAGTGAGCC
AACAAATTTGATCAGGGAAGGCTAAGTAATATAATTTGAAGGGCCCATGTAAATTATGTA
AATCTCATTTGTTCACTGACATCAGTCTTTGACTTGCTCGAAATTTGAATGAAGATATTG
TTCGCACTTTAATTCTGGTACTCCTATATCATCTTGACCTGACTCCTGTATACACTTTAT
TGGGCTGTAAGACTACATCAATAACAGTGAGCCCCGATTCACAGTAAAAGTTGACTTGTT
GCGTTTTCAAACACGCGTGTGAGAATGCAATAAACTTTGGTGCATTAGTTGTTTTGATCG