Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0730300-03
CDS Infomation	cds chromosome:IRGSP-1.0:1:30460748:30464477:1 gene:Os01g0730300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TREHALOSE-6-PHOSPHATE SYNTHASE 3 description:Similar to predicted protein. (Os01t0730300-01);HAD-superfamily hydrolase subfamily IIB protein. (Os01t0730300-02);Similar to predicted protein. (Os01t0730300-03)
Sequence	GCCAACAAGCTCTTCTCCCAGCGCGTCATCGAGGTCCTCAACCCCGAGGATGACTACATC TGGATCCACGATTACCACCTCCTCGCCCTCCCGTCCTTCCTTCGCCGTCGGTTCAACAGG CTCCGCATCGGTTTCTTCCTGCACAGCCCGTTCCCTTCGTCGGAACTCTACCGTTCCCTC CCTGTTCGCGACGAGATCCTCAAATCACTGCTAAACTGCGATCTGATTGGGTTCCACACC TTTGATTACGCGCGGCATTTCCTGTCCTGCTGCAGCCGGATGCTGGGGATCGAGTACCAG TCGAAGAGGGGATATATCGGTCTCGATTACTTTGGCCGCACTGTTGGGATAAAGATCATG CCTGTTGGGATTAACATGACGCAGCTGCAGACGCAGATCCGGCTGCCTGATCTTGAGTGG CGTGTCGCCGAACTCCGGAAGCAGTTTGATGGGAAGACTGTCATGCTCGGTGTGGATGAT ATGGACATATTTAAGGGGATTAATCTGAAAGTTCTTGCGTTTGAGCAGATGCTGAGGACA CACCCAAAATGGCAGCGCAAGGCAGTGTTGGTGCAGATTGCAAACCCAAGGGGTGGTGGT GGGAAGGACCTTGAAGAGATACAGGCTGAGATTGATGAGAGTTGCAGGAGGATAAATGCA CAATTTTCACGGCCAGGATATGTTCCTGTGGTGATTATCAATAGAGCCCTTTCAAGTGTG GAGAGGATGGCTTATTATACCGTGGCAGAGTGTGTCGTTGTAACTGCAGTGAGGGATGGG ATGAACCTCACACCATATGAGTATATTGTCTGTAGACAGGGATTTCCAGATTTGGATGGT TCTGGGGATGATGGGCCAAGGAGAAAGAGTATGTTAGTTGTGTCCGAATTCATTGGTTGC TCACCATCACTTAGTGGAGCAATTCGGGTAAACCCTTGGAACATTGATACAACAGCAGAG GCAATGAACGAGTCGATTGCTTTATCAGAGAACGAGAAGCAACTGCGGCATGAGAAGCAT TACAGATATGTCAGCTCACATGATGTTGCCTATTGGTCCAAGAGCTATATTCATGATTTG GAGAGAAGCTGCAGGGACCATTTTAGGAGGAGGTGCTGGGGTATTGGACTAGGATTTGGA TTTAGAGTAGTTGCTCTTGACCGCAACTTCAAAAAGCTTACTGTGGATTCTATCGTTACT GATTACAAGAATTCTAAGAGCAGGGTTATACTGCTAGACTACGATGGAACGCTAGTACCA CAAACTACAATCAACAGGACTCCAAATGAAAGTGTTGTTAAAATCATGAATGCTCTTTGT GACGATAAGAAGAATGTTGTTTTTATTGTTAGTGGACGAGGAAGGGATAGCCTTGAGAAA TGGTTTTCCCCTTGCCAGGATCTTGGCATTGCTGCCGAACATGGCTACTTTATGAGGTGG ACCAGAGATGAGCAATGGCAATTGAATAACCAGTGCTCAGAATTTGGATGGATGCAGATG GCCAAGCCAGTTATGAACCTGTATACAGAAGCAACCGATGGATCATATATTGAAACCAAA GAGAGTGCTTTGGTCTGGCACCACCAAGATGCTGACCCTGGTTTTGGATCTTCACAAGCT AAAGAGATGCTAGATCATTTGGAAAGTGTTCTTGCTAATGAGCCTGTCTGTGTAAAGAGT GGCCAACAGATTGTGGAAGTGAAACCGCAGGGTGTCAGCAAAGGATTTGTTGCTGAGAAG ATCCTATCAACGCTGACAGAGAACAAGAGACAGGCAGATTTTGTTCTCTGCATAGGCGAT GATAGATCAGACGAGGATATGTTTGAAGGAATTGCTGATATCATGAGAAGGAGCATAGTT GATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGAAGCCAAGCAAGGCTAAGTAC TATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGGCGCTTGCAGATGCATCAGAG GAGACTGATTCACAGGAAGATGCAGAAGAGATAACATCTATCCCGGACCCGGAATAG

Peptide Sequence

PEP ID	Os01t0730300-03
PEP Infomation	pep chromosome:IRGSP-1.0:1:30460748:30464477:1 gene:Os01g0730300 transcript:Os01t0730300-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TREHALOSE-6-PHOSPHATE SYNTHASE 3 description:Similar to predicted protein. (Os01t0730300-01);HAD-superfamily hydrolase subfamily IIB protein. (Os01t0730300-02);Similar to predicted protein. (Os01t0730300-03)
Sequence	ANKLFSQRVIEVLNPEDDYIWIHDYHLLALPSFLRRRFNRLRIGFFLHSPFPSSELYRSL PVRDEILKSLLNCDLIGFHTFDYARHFLSCCSRMLGIEYQSKRGYIGLDYFGRTVGIKIM PVGINMTQLQTQIRLPDLEWRVAELRKQFDGKTVMLGVDDMDIFKGINLKVLAFEQMLRT HPKWQRKAVLVQIANPRGGGGKDLEEIQAEIDESCRRINAQFSRPGYVPVVIINRALSSV ERMAYYTVAECVVVTAVRDGMNLTPYEYIVCRQGFPDLDGSGDDGPRRKSMLVVSEFIGC SPSLSGAIRVNPWNIDTTAEAMNESIALSENEKQLRHEKHYRYVSSHDVAYWSKSYIHDL ERSCRDHFRRRCWGIGLGFGFRVVALDRNFKKLTVDSIVTDYKNSKSRVILLDYDGTLVP QTTINRTPNESVVKIMNALCDDKKNVVFIVSGRGRDSLEKWFSPCQDLGIAAEHGYFMRW TRDEQWQLNNQCSEFGWMQMAKPVMNLYTEATDGSYIETKESALVWHHQDADPGFGSSQA KEMLDHLESVLANEPVCVKSGQQIVEVKPQGVSKGFVAEKILSTLTENKRQADFVLCIGD DRSDEDMFEGIADIMRRSIVDPQTSLYACTVGQKPSKAKYYLDDTNDVLNMLEALADASE ETDSQEDAEEITSIPDPE

Transcript Sequence

Transcript ID	Os01t0730300-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:30460748:30464477:1 gene:Os01g0730300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TREHALOSE-6-PHOSPHATE SYNTHASE 3 description:Similar to predicted protein. (Os01t0730300-01);HAD-superfamily hydrolase subfamily IIB protein. (Os01t0730300-02);Similar to predicted protein. (Os01t0730300-03)
Sequence	CGCCAACAAGCTCTTCTCCCAGCGCGTCATCGAGGTCCTCAACCCCGAGGATGACTACAT CTGGATCCACGATTACCACCTCCTCGCCCTCCCGTCCTTCCTTCGCCGTCGGTTCAACAG GCTCCGCATCGGTTTCTTCCTGCACAGCCCGTTCCCTTCGTCGGAACTCTACCGTTCCCT CCCTGTTCGCGACGAGATCCTCAAATCACTGCTAAACTGCGATCTGATTGGGTTCCACAC CTTTGATTACGCGCGGCATTTCCTGTCCTGCTGCAGCCGGATGCTGGGGATCGAGTACCA GTCGAAGAGGGGATATATCGGTCTCGATTACTTTGGCCGCACTGTTGGGATAAAGATCAT GCCTGTTGGGATTAACATGACGCAGCTGCAGACGCAGATCCGGCTGCCTGATCTTGAGTG GCGTGTCGCCGAACTCCGGAAGCAGTTTGATGGGAAGACTGTCATGCTCGGTGTGGATGA TATGGACATATTTAAGGGGATTAATCTGAAAGTTCTTGCGTTTGAGCAGATGCTGAGGAC ACACCCAAAATGGCAGCGCAAGGCAGTGTTGGTGCAGATTGCAAACCCAAGGGGTGGTGG TGGGAAGGACCTTGAAGAGATACAGGCTGAGATTGATGAGAGTTGCAGGAGGATAAATGC ACAATTTTCACGGCCAGGATATGTTCCTGTGGTGATTATCAATAGAGCCCTTTCAAGTGT GGAGAGGATGGCTTATTATACCGTGGCAGAGTGTGTCGTTGTAACTGCAGTGAGGGATGG GATGAACCTCACACCATATGAGTATATTGTCTGTAGACAGGGATTTCCAGATTTGGATGG TTCTGGGGATGATGGGCCAAGGAGAAAGAGTATGTTAGTTGTGTCCGAATTCATTGGTTG CTCACCATCACTTAGTGGAGCAATTCGGGTAAACCCTTGGAACATTGATACAACAGCAGA GGCAATGAACGAGTCGATTGCTTTATCAGAGAACGAGAAGCAACTGCGGCATGAGAAGCA TTACAGATATGTCAGCTCACATGATGTTGCCTATTGGTCCAAGAGCTATATTCATGATTT GGAGAGAAGCTGCAGGGACCATTTTAGGAGGAGGTGCTGGGGTATTGGACTAGGATTTGG ATTTAGAGTAGTTGCTCTTGACCGCAACTTCAAAAAGCTTACTGTGGATTCTATCGTTAC TGATTACAAGAATTCTAAGAGCAGGGTTATACTGCTAGACTACGATGGAACGCTAGTACC ACAAACTACAATCAACAGGACTCCAAATGAAAGTGTTGTTAAAATCATGAATGCTCTTTG TGACGATAAGAAGAATGTTGTTTTTATTGTTAGTGGACGAGGAAGGGATAGCCTTGAGAA ATGGTTTTCCCCTTGCCAGGATCTTGGCATTGCTGCCGAACATGGCTACTTTATGAGGTG GACCAGAGATGAGCAATGGCAATTGAATAACCAGTGCTCAGAATTTGGATGGATGCAGAT GGCCAAGCCAGTTATGAACCTGTATACAGAAGCAACCGATGGATCATATATTGAAACCAA AGAGAGTGCTTTGGTCTGGCACCACCAAGATGCTGACCCTGGTTTTGGATCTTCACAAGC TAAAGAGATGCTAGATCATTTGGAAAGTGTTCTTGCTAATGAGCCTGTCTGTGTAAAGAG TGGCCAACAGATTGTGGAAGTGAAACCGCAGGGTGTCAGCAAAGGATTTGTTGCTGAGAA GATCCTATCAACGCTGACAGAGAACAAGAGACAGGCAGATTTTGTTCTCTGCATAGGCGA TGATAGATCAGACGAGGATATGTTTGAAGGAATTGCTGATATCATGAGAAGGAGCATAGT TGATCCCCAAACATCATTATATGCGTGCACAGTCGGCCAGAAGCCAAGCAAGGCTAAGTA CTATTTGGACGATACTAATGATGTTTTGAACATGCTTGAGGCGCTTGCAGATGCATCAGA GGAGACTGATTCACAGGAAGATGCAGAAGAGATAACATCTATCCCGGACCCGGAATAGGC GTGATGATGTTTTAAATCTCCTGGTGATGTCAATGCGTCAATTGCCACCAGCAGTCTTCC TGACTAAAATTGAAGCTGATTGCCATCAGCAGGAAGTGCAACTTTAGTAATACTCAGTTA GACAAATCAATGTCAATAATCTTAGCGCTGCTCGATTTTCTGCCATTTTTCTGATTTCTC TTATGATAGTTTTGGAGTAATTCTCATAATATTGGTAGATAGAAAGGAGCCTGGGGGGAA AGAATCCATGGCGTAGTACATCATTTTTCTTTTACCTTGCTTGTTAGGTACAGTATGGAA GATTGGAGTATTTGCGGGAGTACAAGTCGGAAATTTGGTGAGCAATTTTGTATTAGATCC TTTTAAGTTTAAAGCGATAAAACACTATTGCCATTTAAACTAGAGTAAATTTCAT