Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0729600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:30413693:30415806:-1 gene:Os01g0729600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate-dependent transferase, major region, subdomain 1 domain containing protein. (Os01t0729600-01)
Sequence	ATGCCTCTTCTTATCGTGCAGCCCGTACCCATTTCGACAGGTCCTATTGCCTGCGCTAGC ACCGCGCGTCCTGCAGCAGCGGCGCACGATGACGACGGCCACCTTTTCGACGATCTCGTG CTCGGCTACGGCGGCGACGACAAGACGAGCGCCGACGCCGACGATCCAGCGAGGAAGCTC GAGTGGCTCAGGTCGCAGGTCATCGGCGCGGACGCGGAGTTCGCGTCGCCGTTCGGGACC CGCCGCGTCACGTACGCCGATCACACCGCGTCCGGCCGCTGCCTGCGTTTCGTCGAGGAC TTCGTGCAGCGCAACGTTCTTCCCTACTACGGGAACACGCATACGGTGGACAGCTACGTG GGCTTGCACACGAGCAAGCTGGCGTCGGAGGCGGCGAAGTACGTGAAGCGCAGCCTGGGA GCCGGGGCGGAGGACGTGCTGCTCTTCTGCGGCACGGGCTGCACCGCGGCCATCAAGCGG CTCCAGGAGGTGACGGGCATGGCCGTGCCACCGACGCTGCGCTCCGTGGCGCTGGACGTC CTGCCGCCGTCGGAGCGGTGGGTCGTCTTCGTGGGGCCGTACGAGCACCACTCCAACCTG CTCACGTGGCGGGAGAGCCTCGCGGAGGTGGTGGAGATCGGGCTGCGCCCGGACGACGGC CACCTTGACCTCGACGCCCTGGAGGCGGCGCTGGCGGCGCCGGAGCGCGCCGGTCGGCCC ATGCTGGGATCCTTCTCGGCGTGCAGCAACGTCACCGGCATCCGCACCGACACGCGCGCC GTGGCGCGCCTGCTGCACGGCTACGGCGCGTACGCCTGCTTCGACTTCGCGTGCAGCGCG CCCTACGTCGGCATCGACATGCGGTCCGGCGAGGAGGACGGGTACGACGCCGTCTACCTG AGCCCGCACAAGTTCCTGGGGGGACCGGGAAGCCCCGGCGTCCTGGCGATGGCGAAGCGG CTCTATCGCCTCCGCCGCACCGCGCCGTCCACCAGCGGCGGGGGCACCGTCGTCTACGTC AGCGCATACGGCGACACGGTGTACTGCGAGGACACGGAGGAGCGCGAGGACGCCGGCACG CCGGCGATCATACAGAAGGTCCGGGCCGCGCTGGCGTTCCGGGTGAAGGAGTGGGTCGGC GAGGCGTGCATCGAGGCGCGCGAGGACCACATGCTCGCCCTTGCTCTCCGCCGGATGCAA GCGTCTCCAAACCTGCGGCTGCTGCTCGGCGGCGACCGGCCCAGCGGAGGGCGCTGTCTC CCCGTTCTCTCCTTCGTGGTGTACTCACCGCGCGACGGCTCCGAGCAGGATGAGCGGCCG CAGCTGCACTGCCGGTTCGTGACGAAGCTGCTCAACGACCTGTTCGGCGTGCAGGCGCGC GGGGGATGCTCCTGCGCGGGGCCCTACGGCCACCGCCTCCTCGGCATCACGCCGGCGCGA GCCAAGGCCATCAAATCCGCCGTCGAGAAGGGCTACCACGGCGTGCGCCCCGGGTGGACG CGCGTCAGCCTGGCCTACTACACGTCGACGCGGGAGGCGGAGTTCGTGCTGGACGCCATC GACTTCGTCGCCAGTTTCGGCCACCGGTTTCTGCCGCTCTACGCTTTCGACTGGGAAACC GGGGACTGGGAGTACAACCACAGCTTCGGTCGTGTCCTGGCAAACAACAACGCCATCAGC AATGCTGCCGCTGCTGCTTCTAGTGGACGGGTCAAAGCAGAGGACGAGTACCGGAGCTAC ATGGCATTTGCACGGAGCCTAGCCGACTCCTTGGGCGGATGTCTGGATAACACTCCTGCT AGACACGTTCCCAAGGGCATCGACCCACAGTTGCTTTACTTCCCTATGTGA

Peptide Sequence

PEP ID	Os01t0729600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:30413693:30415806:-1 gene:Os01g0729600 transcript:Os01t0729600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate-dependent transferase, major region, subdomain 1 domain containing protein. (Os01t0729600-01)
Sequence	MPLLIVQPVPISTGPIACASTARPAAAAHDDDGHLFDDLVLGYGGDDKTSADADDPARKL EWLRSQVIGADAEFASPFGTRRVTYADHTASGRCLRFVEDFVQRNVLPYYGNTHTVDSYV GLHTSKLASEAAKYVKRSLGAGAEDVLLFCGTGCTAAIKRLQEVTGMAVPPTLRSVALDV LPPSERWVVFVGPYEHHSNLLTWRESLAEVVEIGLRPDDGHLDLDALEAALAAPERAGRP MLGSFSACSNVTGIRTDTRAVARLLHGYGAYACFDFACSAPYVGIDMRSGEEDGYDAVYL SPHKFLGGPGSPGVLAMAKRLYRLRRTAPSTSGGGTVVYVSAYGDTVYCEDTEEREDAGT PAIIQKVRAALAFRVKEWVGEACIEAREDHMLALALRRMQASPNLRLLLGGDRPSGGRCL PVLSFVVYSPRDGSEQDERPQLHCRFVTKLLNDLFGVQARGGCSCAGPYGHRLLGITPAR AKAIKSAVEKGYHGVRPGWTRVSLAYYTSTREAEFVLDAIDFVASFGHRFLPLYAFDWET GDWEYNHSFGRVLANNNAISNAAAAASSGRVKAEDEYRSYMAFARSLADSLGGCLDNTPA RHVPKGIDPQLLYFPM

Transcript Sequence

Transcript ID	Os01t0729600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:30413693:30415806:-1 gene:Os01g0729600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate-dependent transferase, major region, subdomain 1 domain containing protein. (Os01t0729600-01)
Sequence	ATTAACGGGTCATCTCCTGCCTTCCCCATTGGTCCGAACAGCTACCGCTAGCACACAAAA GTACAGAATTCCAAACCAAATCCTGTACCAAAACAGGAAGGGCGCAGGCATGCCTCTTCT TATCGTGCAGCCCGTACCCATTTCGACAGGTCCTATTGCCTGCGCTAGCACCGCGCGTCC TGCAGCAGCGGCGCACGATGACGACGGCCACCTTTTCGACGATCTCGTGCTCGGCTACGG CGGCGACGACAAGACGAGCGCCGACGCCGACGATCCAGCGAGGAAGCTCGAGTGGCTCAG GTCGCAGGTCATCGGCGCGGACGCGGAGTTCGCGTCGCCGTTCGGGACCCGCCGCGTCAC GTACGCCGATCACACCGCGTCCGGCCGCTGCCTGCGTTTCGTCGAGGACTTCGTGCAGCG CAACGTTCTTCCCTACTACGGGAACACGCATACGGTGGACAGCTACGTGGGCTTGCACAC GAGCAAGCTGGCGTCGGAGGCGGCGAAGTACGTGAAGCGCAGCCTGGGAGCCGGGGCGGA GGACGTGCTGCTCTTCTGCGGCACGGGCTGCACCGCGGCCATCAAGCGGCTCCAGGAGGT GACGGGCATGGCCGTGCCACCGACGCTGCGCTCCGTGGCGCTGGACGTCCTGCCGCCGTC GGAGCGGTGGGTCGTCTTCGTGGGGCCGTACGAGCACCACTCCAACCTGCTCACGTGGCG GGAGAGCCTCGCGGAGGTGGTGGAGATCGGGCTGCGCCCGGACGACGGCCACCTTGACCT CGACGCCCTGGAGGCGGCGCTGGCGGCGCCGGAGCGCGCCGGTCGGCCCATGCTGGGATC CTTCTCGGCGTGCAGCAACGTCACCGGCATCCGCACCGACACGCGCGCCGTGGCGCGCCT GCTGCACGGCTACGGCGCGTACGCCTGCTTCGACTTCGCGTGCAGCGCGCCCTACGTCGG CATCGACATGCGGTCCGGCGAGGAGGACGGGTACGACGCCGTCTACCTGAGCCCGCACAA GTTCCTGGGGGGACCGGGAAGCCCCGGCGTCCTGGCGATGGCGAAGCGGCTCTATCGCCT CCGCCGCACCGCGCCGTCCACCAGCGGCGGGGGCACCGTCGTCTACGTCAGCGCATACGG CGACACGGTGTACTGCGAGGACACGGAGGAGCGCGAGGACGCCGGCACGCCGGCGATCAT ACAGAAGGTCCGGGCCGCGCTGGCGTTCCGGGTGAAGGAGTGGGTCGGCGAGGCGTGCAT CGAGGCGCGCGAGGACCACATGCTCGCCCTTGCTCTCCGCCGGATGCAAGCGTCTCCAAA CCTGCGGCTGCTGCTCGGCGGCGACCGGCCCAGCGGAGGGCGCTGTCTCCCCGTTCTCTC CTTCGTGGTGTACTCACCGCGCGACGGCTCCGAGCAGGATGAGCGGCCGCAGCTGCACTG CCGGTTCGTGACGAAGCTGCTCAACGACCTGTTCGGCGTGCAGGCGCGCGGGGGATGCTC CTGCGCGGGGCCCTACGGCCACCGCCTCCTCGGCATCACGCCGGCGCGAGCCAAGGCCAT CAAATCCGCCGTCGAGAAGGGCTACCACGGCGTGCGCCCCGGGTGGACGCGCGTCAGCCT GGCCTACTACACGTCGACGCGGGAGGCGGAGTTCGTGCTGGACGCCATCGACTTCGTCGC CAGTTTCGGCCACCGGTTTCTGCCGCTCTACGCTTTCGACTGGGAAACCGGGGACTGGGA GTACAACCACAGCTTCGGTCGTGTCCTGGCAAACAACAACGCCATCAGCAATGCTGCCGC TGCTGCTTCTAGTGGACGGGTCAAAGCAGAGGACGAGTACCGGAGCTACATGGCATTTGC ACGGAGCCTAGCCGACTCCTTGGGCGGATGTCTGGATAACACTCCTGCTAGACACGTTCC CAAGGGCATCGACCCACAGTTGCTTTACTTCCCTATGTGAGATCGGATAGTTGGATTCTT TGTTGTTGAATTTTACCCTTGGTTTTTGGCCGAAAACCTGG