Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0728300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:30372204:30376912:-1 gene:Os01g0728300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cytochrome P450 monooxygenase CYP72A5 (Fragment). (Os01t0728300-01)
Sequence	ATGCTGGGAGAGGCCGCCTCACCGTGGAGCCTGGCCGGCGCGGGCGCGGCCGTGGCGCTG CTGTGGCTGTGCGCCTGGACGCTGCAGTGGGCGTGGTGGACGCCGCGGCGGCTGGAGCGG GCCCTGCGGGCGCAGGGCCTCCGGGGCACCAGGTACCGCCTCTTCATCGGCGACGTGGCC GAGAACGGCCGGCTCAACAGAGAGGCCGCGTCAAGGCCGCTGCCGCTCGGCTCGCACGAC GTCGTCCCGCGCGTCATGCCCTTCTTCTGCAACGTCCTGAAAGAGCACGGGAAACTGTCG TTCGTTTGGACTGGCCCAAAGCCATTCGTGATTATCAGAGACCCTGACTTAGCGAGGGAG ATTTTGTCCAACAAGTCTGGCAATTTCGCCAAGCAAACGACCGCGGGTATTGCTAAGTTC GTAGTTGGCGGAGTTGTAACGTATGAAGGTGAGAAATGGGCAAAACATCGGAGAATTCTC AACCCTGCCTTCCACCAGGAGAAAATAAAGCGGATGCTGCCAGTGTTTTTAGCATGTTGC ACCAAAATGATCACTAGATGGGTGAATTCAATGTCTTCAGAAGGAATATCTGAGTTAGAC GTTTGGGATGAATTTCAAAATCTTACTGGAGATGTCATCTCAAGAACGGCATTTGGGAGC AGCTACCAGGAGGGGTGGAGAATTTTTCAGTTACAAGAAGAGCAAGCTAAACGCGTACTT AAAGCTTTTCAGAGAATCTTTATCCCAGGCTACTGGTACTTACCAATCGAAAACAACAGA AGGATCAGGGAAATTGATCAAGAAATCCGCACAATTCTGCGAGGAATAATAGTAAAAAGA GACAAGGCAGTTAGAAATGGTGAAGGTAGCAATGATGATTTGTTGGGATTATTGGTGGAA TCGAATATGAGGCAATCAAATGAAAAAGAAGATGTGGGAATGAGTATAGAAGATATGATT GAGGAATGCAAGTTATTTTACGCTGCTGGTTCGGAGACAACATCAATGTTGCTCACTTGG ACTTTAATTCTGCTAAGCATGCACCCTGAATGGCAAGAGCAGGCAAGAGAGGAAGTGATG CACCATTTTGGAAGAACCACACCAGATCATGATGGCTTGAGTCGTCTAAAGATTGTAACG ATGATTCTCCACGAGGTTCTTAGGTTGTACCCACCGGTGGTATTCCTCCAAAGAACAACA CACAAGGAAATAGAGCTTGGTGGCATCAAATACCCTGAAGGAGTGAACTTCACATTGCCT GTTCTATCCATTCACCACGATCCTAGCATCTGGGGACAAGATGCAATCAAATTCAACCCG GAAAGGTTCGCCAACGGAGTCTCCAAGGCAACGAAGTTTCAGACCGCGTTCTTTTCGTTT GCATGGGGTCCTCGGATCTGCCTTGGCCAGAGCTTTGCAATTCTGGAAGCCAAGATGGCG CTCGCCACCATCCTCCAGAGCTTCTCCTTCGAGCTCTCGCCGTCATACACCCACGCACCA CACACCGTGCTAACTCTCCAACCACAGTACGGTTCTCCAATTAAATTGAAGAAGCTCTAG

Peptide Sequence

PEP ID	Os01t0728300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:30372204:30376912:-1 gene:Os01g0728300 transcript:Os01t0728300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cytochrome P450 monooxygenase CYP72A5 (Fragment). (Os01t0728300-01)
Sequence	MLGEAASPWSLAGAGAAVALLWLCAWTLQWAWWTPRRLERALRAQGLRGTRYRLFIGDVA ENGRLNREAASRPLPLGSHDVVPRVMPFFCNVLKEHGKLSFVWTGPKPFVIIRDPDLARE ILSNKSGNFAKQTTAGIAKFVVGGVVTYEGEKWAKHRRILNPAFHQEKIKRMLPVFLACC TKMITRWVNSMSSEGISELDVWDEFQNLTGDVISRTAFGSSYQEGWRIFQLQEEQAKRVL KAFQRIFIPGYWYLPIENNRRIREIDQEIRTILRGIIVKRDKAVRNGEGSNDDLLGLLVE SNMRQSNEKEDVGMSIEDMIEECKLFYAAGSETTSMLLTWTLILLSMHPEWQEQAREEVM HHFGRTTPDHDGLSRLKIVTMILHEVLRLYPPVVFLQRTTHKEIELGGIKYPEGVNFTLP VLSIHHDPSIWGQDAIKFNPERFANGVSKATKFQTAFFSFAWGPRICLGQSFAILEAKMA LATILQSFSFELSPSYTHAPHTVLTLQPQYGSPIKLKKL

Transcript Sequence

Transcript ID	Os01t0728300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:30372204:30376912:-1 gene:Os01g0728300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cytochrome P450 monooxygenase CYP72A5 (Fragment). (Os01t0728300-01)
Sequence	GGTCTTGCGACACCACCGATTGTTCGGCTTGCACTGACACCACCGGAGGCTGAGAGCCCG CCAACGGCGAAGGAGAGTTGCACCGGCGCGTCGCTGATGCTGGGAGAGGCCGCCTCACCG TGGAGCCTGGCCGGCGCGGGCGCGGCCGTGGCGCTGCTGTGGCTGTGCGCCTGGACGCTG CAGTGGGCGTGGTGGACGCCGCGGCGGCTGGAGCGGGCCCTGCGGGCGCAGGGCCTCCGG GGCACCAGGTACCGCCTCTTCATCGGCGACGTGGCCGAGAACGGCCGGCTCAACAGAGAG GCCGCGTCAAGGCCGCTGCCGCTCGGCTCGCACGACGTCGTCCCGCGCGTCATGCCCTTC TTCTGCAACGTCCTGAAAGAGCACGGGAAACTGTCGTTCGTTTGGACTGGCCCAAAGCCA TTCGTGATTATCAGAGACCCTGACTTAGCGAGGGAGATTTTGTCCAACAAGTCTGGCAAT TTCGCCAAGCAAACGACCGCGGGTATTGCTAAGTTCGTAGTTGGCGGAGTTGTAACGTAT GAAGGTGAGAAATGGGCAAAACATCGGAGAATTCTCAACCCTGCCTTCCACCAGGAGAAA ATAAAGCGGATGCTGCCAGTGTTTTTAGCATGTTGCACCAAAATGATCACTAGATGGGTG AATTCAATGTCTTCAGAAGGAATATCTGAGTTAGACGTTTGGGATGAATTTCAAAATCTT ACTGGAGATGTCATCTCAAGAACGGCATTTGGGAGCAGCTACCAGGAGGGGTGGAGAATT TTTCAGTTACAAGAAGAGCAAGCTAAACGCGTACTTAAAGCTTTTCAGAGAATCTTTATC CCAGGCTACTGGTACTTACCAATCGAAAACAACAGAAGGATCAGGGAAATTGATCAAGAA ATCCGCACAATTCTGCGAGGAATAATAGTAAAAAGAGACAAGGCAGTTAGAAATGGTGAA GGTAGCAATGATGATTTGTTGGGATTATTGGTGGAATCGAATATGAGGCAATCAAATGAA AAAGAAGATGTGGGAATGAGTATAGAAGATATGATTGAGGAATGCAAGTTATTTTACGCT GCTGGTTCGGAGACAACATCAATGTTGCTCACTTGGACTTTAATTCTGCTAAGCATGCAC CCTGAATGGCAAGAGCAGGCAAGAGAGGAAGTGATGCACCATTTTGGAAGAACCACACCA GATCATGATGGCTTGAGTCGTCTAAAGATTGTAACGATGATTCTCCACGAGGTTCTTAGG TTGTACCCACCGGTGGTATTCCTCCAAAGAACAACACACAAGGAAATAGAGCTTGGTGGC ATCAAATACCCTGAAGGAGTGAACTTCACATTGCCTGTTCTATCCATTCACCACGATCCT AGCATCTGGGGACAAGATGCAATCAAATTCAACCCGGAAAGGTTCGCCAACGGAGTCTCC AAGGCAACGAAGTTTCAGACCGCGTTCTTTTCGTTTGCATGGGGTCCTCGGATCTGCCTT GGCCAGAGCTTTGCAATTCTGGAAGCCAAGATGGCGCTCGCCACCATCCTCCAGAGCTTC TCCTTCGAGCTCTCGCCGTCATACACCCACGCACCACACACCGTGCTAACTCTCCAACCA CAGTACGGTTCTCCAATTAAATTGAAGAAGCTCTAGTGATCTCGGTCGAGGAGAACATAA AGCTACCCCGTACATGCTGAAATCTAAATCTATATGAATAAATTTCATAAAACTACATGT ATTTTAATCAAATTATCACAAACTATAGATTTAACACAATATTTATTAGAGAACTACAAA TTTAGGGCCAAGTACAAAACTATAGATTTAATACTAGAGTTATCACAAAACTACAGGTTT TATAGTTTAAATCTCTGCCACTAATGTTACGTTAGAGTTATAAATGTTGCAAGTTTTGTA CTTAACATGGTGCCAACAATGTAGTTTTGTGATAATTTTATTACTAAATATGTACTCCCT CCATCCTAAAATAAGCGCACCCATGAGTTTTTTGTGTCTAACTTTGATCGCCCGTATTTT TTTTATGATCAGTACTTTTATTGTTATTATATTATAAAACATGAATGGTACTTGTCG