Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0727900-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:30352663:30353959:1 gene:Os01g0727900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0727900-01)
Sequence

ATGGCCCTAGCCGGAGCCCCTCGCCGCCGGCGAGCTACACGTTCGCGTCTCCCCCCCACT
CTCCTCCTCATCGTCCTCCTCCTCCTCGGCGGGGCTCCTCGTGCTTCCGCGCTCCGCGTC
CCGCTTCGCGAGGTCGCCACCCTCCTCAACCTCTCCCGCTCCCTCCTCAACCGCGTCGCC
GCCGCCCGCGCGGCCCGTGGAGACGACTTTGCGGCGTCCCGCGCGCGCAGGATCGCCTCC
CATCTCTCCCTCTTCTCATCCCGCGGCGCGTGGGCACTCTCTTGGGACTACCTCCGCCAC
TACGCCTTCTCGTCGGCTGCCGGGTGCGGCCTCTCCTGCGCCACCGCCGCTGCTCGCCTC
CTCGCTGCTGCTGCGGAGGTCTCGCGCCTGCATTCCGCCACCGACGCCGCCCAGTGGCTG
CGCCGCAATTACGGGGACGTCCGCGACGCGGCCGCGCAGCTCCTCAACGGTCTCCTTGTT
GCCTTCTCCGAGCAGGGGCCTTTACGAGAGGTGGTGATGGATGTGAAGTGGGAAGTGGAG
GAAGGGGAGCTGCTGAAGGATTGCCTCAAGGTGGGAGCTAAGGACTTGGAGGGGTTGCTT
GTCATTGCCAAAGATCTCTTATTTGGGGCCACAAGGACTTCTTCGCGCCACAACGAACTT
TGA

Peptide Sequence

PEP ID

Os01t0727900-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:30352663:30353959:1 gene:Os01g0727900 transcript:Os01t0727900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0727900-01)
Sequence

MALAGAPRRRRATRSRLPPTLLLIVLLLLGGAPRASALRVPLREVATLLNLSRSLLNRVA
AARAARGDDFAASRARRIASHLSLFSSRGAWALSWDYLRHYAFSSAAGCGLSCATAAARL
LAAAAEVSRLHSATDAAQWLRRNYGDVRDAAAQLLNGLLVAFSEQGPLREVVMDVKWEVE
EGELLKDCLKVGAKDLEGLLVIAKDLLFGATRTSSRHNEL

Transcript Sequence

Transcript ID

Os01t0727900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:30352663:30353959:1 gene:Os01g0727900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0727900-01)
Sequence

ACCTCCGATTTCCAATGGCCCTAGCCGGAGCCCCTCGCCGCCGGCGAGCTACACGTTCGC
GTCTCCCCCCCACTCTCCTCCTCATCGTCCTCCTCCTCCTCGGCGGGGCTCCTCGTGCTT
CCGCGCTCCGCGTCCCGCTTCGCGAGGTCGCCACCCTCCTCAACCTCTCCCGCTCCCTCC
TCAACCGCGTCGCCGCCGCCCGCGCGGCCCGTGGAGACGACTTTGCGGCGTCCCGCGCGC
GCAGGATCGCCTCCCATCTCTCCCTCTTCTCATCCCGCGGCGCGTGGGCACTCTCTTGGG
ACTACCTCCGCCACTACGCCTTCTCGTCGGCTGCCGGGTGCGGCCTCTCCTGCGCCACCG
CCGCTGCTCGCCTCCTCGCTGCTGCTGCGGAGGTCTCGCGCCTGCATTCCGCCACCGACG
CCGCCCAGTGGCTGCGCCGCAATTACGGGGACGTCCGCGACGCGGCCGCGCAGCTCCTCA
ACGGTCTCCTTGTTGCCTTCTCCGAGCAGGGGCCTTTACGAGAGGTGGTGATGGATGTGA
AGTGGGAAGTGGAGGAAGGGGAGCTGCTGAAGGATTGCCTCAAGGTGGGAGCTAAGGACT
TGGAGGGGTTGCTTGTCATTGCCAAAGATCTCTTATTTGGGGCCACAAGGACTTCTTCGC
GCCACAACGAACTTTGAGGTTTGGTACATTGGAGACTCGCTGTGCTCCTGTTCTTTCATT
TGAACTAATGAAATTAAACTTAAGTTCAGTATTAGAAATCCAGAACTTCGGTTAACATTA
CATCCTGCAGACCACCTAGTAACTACCGGTGTGATATTATACCCAGCGTTTCATACCCGA
GAAAATTTTTGTGTGAAGATGCATAGTTGAAATATACTCCCTCCGTCCCAAAATACTTGT
CGTTTTGAGTTTTTGTTTGTAACGTTTGACGACTAGTCGTATTCAAAAGATTATGGAATT
ATTATTTATTTTGTTTGTGACTTGCTTTATTATTAAAAGTACTTTAAGTATGACATTTTT
TTTTAATATTTGCACTAATTTTTTAAATAAGACGAATGGTCAAACGTTGCAAGCAAAAAG
TCAAAACAACATCTAATTTGGGACGGAGGTAGTATCTTCTAGTGGTTAATGAATCGTAAT
CATTGCGAAGTGTTCATTATCGATACACATATTCTGGTGGATAATTAATGAAAAGTTGAT
AACC