Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0725600-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:30251471:30254956:1 gene:Os01g0725600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of chromosome condensation, RCC1 domain containing protein. (Os01t0725600-01)
Sequence

ATGCCGCCCAAGGTGGTCGCCGTGGCCGCCGGCGAGGCCCACACGCTCGCCCTCACCGGT
GACGGTGAGGTGTACTCGTGGGGACGGGGCATGTTCGGCCGCCTCGGGACCGGGCGCGAG
GCCGACGAGCACGTGCCCACCGTGGTCGCCGCCGGCGGGAGGCCGCGGCCCAGGTTCGTG
GCCGTCGCATCCGGCGCCTACCACAGCCTTGCGCTGGACGATGAAGGTTCGCTCTGGTCA
TGGGGTTACAACATCTATGGTCAGCTTGGCTACGGGGAAGAGAATTCTCTTTTCCCATGT
TTGGTTGAGCGTTTTCAAGATTTGGGTTCACCTGAAACGCTGCAGTCTGAAGCACAGAAC
AGTAGCACACAGTCTTCATTGAAGTTGTCTTCTGTTAAAGCTGGGGGCATGATGTCATTT
GCCATAGACACTCTGGGAGCTATGTGGATGTGGGGAAATTGCCCGCAGCAGACTGATGCT
GGAGAGTTTTGTATAGCACCTAGCTGTGTCCCACTACCTGTGTGGGATTTCCATGGTCAC
ACTGTTGTTAAGGTTGCCTGTGGTAATGAGCATGTCGTAGCTGCAGTCAGTGCTGGAGAG
ACCTATACAGGAGGTGACCTTGTTTGTTATGCCTGGGGCAATAACAACCATGGCCAGTTG
GGTCTAGGTGACAAGGAAAGTAGATCCCGTCCTGTGCTTATCTCAGCTTTTAGCGAAGGA
TCTTCTTGGGAGGTGTATGAAATTGCCTGCGGAACTTGGCACACCGCTGTCCTTACCAAT
AAGAAGTCTTTCGACGTGGATCTTGAATCTCGTTGCTGGACGTTTGGCCTTGGTGATAAT
GGGCAGCTTGGCCATGGGACCACTGCCACCATTTGCTCTCCTCAACCTGTTGATGGCTTG
CCAACTGGTTCCTTCCTTATTTCTCTTGATTGTGGATTGTTCCATACAACTGTAGTTTCT
TCTGATGGAGAGGTTTGGTGCTGGGGAATGGAGAGAGGTCTTGGGTTGTGCCCTGATGCC
AGCTTTTCAGGAGTTGATTCAGGGGATGCTCTACGCCCGATAAGAGTTCAGTCTCCTGAG
ACAAATGGGTTCAAATTTCTTGGTGCAGTGCAGGTCACTTGTGGAGCTGCTCACACTGTT
CTTGTTGCTGGTGATGGGTATAGGATGTGGGCTTGGGGCAGAGGCCGCAGTGGTGTGCTT
GGGAGAAACCAGACTGCTGACAGTTACATACCATGTGTTGTGATGTGGCCTCCTCTTGAT
GAGAACTTCCAAGAAATTCATGAGGATAGAGCACAGGCATCAACATCGGGAGTGAATGAC
CGGAATAGCGCTGAGTTGGAACAAAAGCTATCTGCTGCCTCAGAAGAGCTGGAGTTTCTT
CGGTCAAAACTGACACTTATGGAGAGATATGCCAACATACTTCACATTTCAATATTTCGT
AAACCTCTAGATGAACGAACACTTCCACGTTCCCTTCAAGAATCTCCTGTCTTTGATATT
AGAAAGGAATTTGAGAACATCTTGGATACAGCAGGTACTGATGAACTCAATCGCCTGGAG
ATCTTCTACCGCAGCATGCTTTCTGGTGTGAAGGATAAGCTTTTGAAGAGAAGAGTCCAG
GAAATGGTCCAAGAGTGCATTGTTTCGCTCTCTTCAGGGAGACAAACCCCATGA

Peptide Sequence

PEP ID

Os01t0725600-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:30251471:30254956:1 gene:Os01g0725600 transcript:Os01t0725600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of chromosome condensation, RCC1 domain containing protein. (Os01t0725600-01)
Sequence

MPPKVVAVAAGEAHTLALTGDGEVYSWGRGMFGRLGTGREADEHVPTVVAAGGRPRPRFV
AVASGAYHSLALDDEGSLWSWGYNIYGQLGYGEENSLFPCLVERFQDLGSPETLQSEAQN
SSTQSSLKLSSVKAGGMMSFAIDTLGAMWMWGNCPQQTDAGEFCIAPSCVPLPVWDFHGH
TVVKVACGNEHVVAAVSAGETYTGGDLVCYAWGNNNHGQLGLGDKESRSRPVLISAFSEG
SSWEVYEIACGTWHTAVLTNKKSFDVDLESRCWTFGLGDNGQLGHGTTATICSPQPVDGL
PTGSFLISLDCGLFHTTVVSSDGEVWCWGMERGLGLCPDASFSGVDSGDALRPIRVQSPE
TNGFKFLGAVQVTCGAAHTVLVAGDGYRMWAWGRGRSGVLGRNQTADSYIPCVVMWPPLD
ENFQEIHEDRAQASTSGVNDRNSAELEQKLSAASEELEFLRSKLTLMERYANILHISIFR
KPLDERTLPRSLQESPVFDIRKEFENILDTAGTDELNRLEIFYRSMLSGVKDKLLKRRVQ
EMVQECIVSLSSGRQTP

Transcript Sequence

Transcript ID

Os01t0725600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:30251471:30254956:1 gene:Os01g0725600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulator of chromosome condensation, RCC1 domain containing protein. (Os01t0725600-01)
Sequence

AGTTGTACTCGTGCCCTCCTCTTCCTCCCACTCCTCCTCATCTGCCCTCTCGTCCACTCC
ACCGCTGCTCCCCGCTGCCGCCGCAGATGCCGCCCAAGGTGGTCGCCGTGGCCGCCGGCG
AGGCCCACACGCTCGCCCTCACCGGTGACGGTGAGGTGTACTCGTGGGGACGGGGCATGT
TCGGCCGCCTCGGGACCGGGCGCGAGGCCGACGAGCACGTGCCCACCGTGGTCGCCGCCG
GCGGGAGGCCGCGGCCCAGGTTCGTGGCCGTCGCATCCGGCGCCTACCACAGCCTTGCGC
TGGACGATGAAGGTTCGCTCTGGTCATGGGGTTACAACATCTATGGTCAGCTTGGCTACG
GGGAAGAGAATTCTCTTTTCCCATGTTTGGTTGAGCGTTTTCAAGATTTGGGTTCACCTG
AAACGCTGCAGTCTGAAGCACAGAACAGTAGCACACAGTCTTCATTGAAGTTGTCTTCTG
TTAAAGCTGGGGGCATGATGTCATTTGCCATAGACACTCTGGGAGCTATGTGGATGTGGG
GAAATTGCCCGCAGCAGACTGATGCTGGAGAGTTTTGTATAGCACCTAGCTGTGTCCCAC
TACCTGTGTGGGATTTCCATGGTCACACTGTTGTTAAGGTTGCCTGTGGTAATGAGCATG
TCGTAGCTGCAGTCAGTGCTGGAGAGACCTATACAGGAGGTGACCTTGTTTGTTATGCCT
GGGGCAATAACAACCATGGCCAGTTGGGTCTAGGTGACAAGGAAAGTAGATCCCGTCCTG
TGCTTATCTCAGCTTTTAGCGAAGGATCTTCTTGGGAGGTGTATGAAATTGCCTGCGGAA
CTTGGCACACCGCTGTCCTTACCAATAAGAAGTCTTTCGACGTGGATCTTGAATCTCGTT
GCTGGACGTTTGGCCTTGGTGATAATGGGCAGCTTGGCCATGGGACCACTGCCACCATTT
GCTCTCCTCAACCTGTTGATGGCTTGCCAACTGGTTCCTTCCTTATTTCTCTTGATTGTG
GATTGTTCCATACAACTGTAGTTTCTTCTGATGGAGAGGTTTGGTGCTGGGGAATGGAGA
GAGGTCTTGGGTTGTGCCCTGATGCCAGCTTTTCAGGAGTTGATTCAGGGGATGCTCTAC
GCCCGATAAGAGTTCAGTCTCCTGAGACAAATGGGTTCAAATTTCTTGGTGCAGTGCAGG
TCACTTGTGGAGCTGCTCACACTGTTCTTGTTGCTGGTGATGGGTATAGGATGTGGGCTT
GGGGCAGAGGCCGCAGTGGTGTGCTTGGGAGAAACCAGACTGCTGACAGTTACATACCAT
GTGTTGTGATGTGGCCTCCTCTTGATGAGAACTTCCAAGAAATTCATGAGGATAGAGCAC
AGGCATCAACATCGGGAGTGAATGACCGGAATAGCGCTGAGTTGGAACAAAAGCTATCTG
CTGCCTCAGAAGAGCTGGAGTTTCTTCGGTCAAAACTGACACTTATGGAGAGATATGCCA
ACATACTTCACATTTCAATATTTCGTAAACCTCTAGATGAACGAACACTTCCACGTTCCC
TTCAAGAATCTCCTGTCTTTGATATTAGAAAGGAATTTGAGAACATCTTGGATACAGCAG
GTACTGATGAACTCAATCGCCTGGAGATCTTCTACCGCAGCATGCTTTCTGGTGTGAAGG
ATAAGCTTTTGAAGAGAAGAGTCCAGGAAATGGTCCAAGAGTGCATTGTTTCGCTCTCTT
CAGGGAGACAAACCCCATGAGGTCAGTAAATTAGATGATTAATCACCAAATTGTAATTCC
TGTTGTGCAGCATCTATCAAATTTTGTGCATTAAAATTGTAATAAGCTCTGATGCTGCCA
GCTTGTTGTTTTATCAAAGTTAAATTATAATACAAAATAATCTAACCATTTTGGTAAACT
TATCAGTTATGGTCACTCCGTCATTATGT