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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0724700-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:30225839:30226507:1 gene:Os01g0724700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to lachrymatory-factor synthase. (Os01t0724700-00)
Sequence

ATGCACACGGATACACGTGTCACATATGGCTTCACGCTAAACACTCGGTCAAGGTCAAGC
ATAAAGCAAGAACAGTCAGAGGTCTCCAATGTCCAATCTCCATTTTCCACCGGCATGATG
CAACAAGCAGCAGCAGCAGCCGAAGCACACGGCTCCGGTCACCCGGCGGCGTCCATGGCT
GACGACGGGAAGGAGGAAGCAGTCTCGGCGGCGTGGCACGGGTCGGTTCGCGCCGCGGTG
GAGGGGCCGACGCCGGACCAGGCGTGGGCGCTGCTCGGGGACTTCTGCTCCCTCCACCGG
TGGGTACCCTCGGTGCAGACGTGCCGAAGGGTGGAGGGCGCCGAGGGCCAGCCCGGGTGC
GTCCGCTACTGTGCCGGCCCGGTGAACAAGGCGGCGGAGGCTGTGGCCGGGTGGTCCAAG
GAGAGGCTGGTCGAGTTCGACCCAGTCGCGCGGCGGTACAGCTACGAGGTGGTGGAGACC
AACAAGGGGTTCGGCCGGTACGCGGCCACGCTCCGGGTGGAGCCCGACCCGGCCGGGTGC
GCCGTCGCGTGGTCGTTCGAGGCCGACCCGGTGCGGGGCTGGTCGCTGGAAGGGTTCGTG
GGGTTCCTCGACGAGCTCGCGCGCGGCGTCGCCAGGAGGCTCGAGGAGGAGATCATGTCG
CGGAATTAG

Peptide Sequence

PEP ID

Os01t0724700-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:30225839:30226507:1 gene:Os01g0724700 transcript:Os01t0724700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to lachrymatory-factor synthase. (Os01t0724700-00)
Sequence

MHTDTRVTYGFTLNTRSRSSIKQEQSEVSNVQSPFSTGMMQQAAAAAEAHGSGHPAASMA
DDGKEEAVSAAWHGSVRAAVEGPTPDQAWALLGDFCSLHRWVPSVQTCRRVEGAEGQPGC
VRYCAGPVNKAAEAVAGWSKERLVEFDPVARRYSYEVVETNKGFGRYAATLRVEPDPAGC
AVAWSFEADPVRGWSLEGFVGFLDELARGVARRLEEEIMSRN

Transcript Sequence

Transcript ID

Os01t0724700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:30225839:30226507:1 gene:Os01g0724700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to lachrymatory-factor synthase. (Os01t0724700-00)
Sequence

ATGCACACGGATACACGTGTCACATATGGCTTCACGCTAAACACTCGGTCAAGGTCAAGC
ATAAAGCAAGAACAGTCAGAGGTCTCCAATGTCCAATCTCCATTTTCCACCGGCATGATG
CAACAAGCAGCAGCAGCAGCCGAAGCACACGGCTCCGGTCACCCGGCGGCGTCCATGGCT
GACGACGGGAAGGAGGAAGCAGTCTCGGCGGCGTGGCACGGGTCGGTTCGCGCCGCGGTG
GAGGGGCCGACGCCGGACCAGGCGTGGGCGCTGCTCGGGGACTTCTGCTCCCTCCACCGG
TGGGTACCCTCGGTGCAGACGTGCCGAAGGGTGGAGGGCGCCGAGGGCCAGCCCGGGTGC
GTCCGCTACTGTGCCGGCCCGGTGAACAAGGCGGCGGAGGCTGTGGCCGGGTGGTCCAAG
GAGAGGCTGGTCGAGTTCGACCCAGTCGCGCGGCGGTACAGCTACGAGGTGGTGGAGACC
AACAAGGGGTTCGGCCGGTACGCGGCCACGCTCCGGGTGGAGCCCGACCCGGCCGGGTGC
GCCGTCGCGTGGTCGTTCGAGGCCGACCCGGTGCGGGGCTGGTCGCTGGAAGGGTTCGTG
GGGTTCCTCGACGAGCTCGCGCGCGGCGTCGCCAGGAGGCTCGAGGAGGAGATCATGTCG
CGGAATTAG