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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0723200-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:30157961:30159769:-1 gene:Os01g0723200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S19-like. (Os01t0723200-01)
Sequence

ATGTCGGACTCCAAGGCCGCGGCGGCGGTCACCCTCCGCACCCGCAAGTTCATGACCAAC
CGCCTCCTCTCCCGCAAGCAATTCGTGCTCGAGGTGATCCACCCCGGCCGGCCCAACGTC
TCCAAGGCTGAGCTGAAGGAGAAGCTGGCCAAGCTGTACGAGGTGAAGGACGCGAACTGC
ATCTTCGTGTTCAAGTTCCGCACCCACTTCGGTGGAGGCAAGTCCACCGGATTCGGCCTC
ATCTACGATAACCTCGACGCCGCGAAGAAGTACGAGCCCAAGTACCGCCTCATCAGGAAT
GGTCTTGCTACCAAGGTTGAGAAATCTCGCAAGCAAATGAAAGAACGCAAGAACAGAGCT
AAGAAGATCCGTGGTGTCAAGAAGACCAAGGCTGGTGATGCCGGGAAAAAGAAGTGA

Peptide Sequence

PEP ID

Os01t0723200-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:30157961:30159769:-1 gene:Os01g0723200 transcript:Os01t0723200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S19-like. (Os01t0723200-01)
Sequence

MSDSKAAAAVTLRTRKFMTNRLLSRKQFVLEVIHPGRPNVSKAELKEKLAKLYEVKDANC
IFVFKFRTHFGGGKSTGFGLIYDNLDAAKKYEPKYRLIRNGLATKVEKSRKQMKERKNRA
KKIRGVKKTKAGDAGKKK

Transcript Sequence

Transcript ID

Os01t0723200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:30157961:30159769:-1 gene:Os01g0723200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 40S ribosomal protein S19-like. (Os01t0723200-01)
Sequence

GTGCCGCCAGCCAAACCTCTGCCGCGCTCCTCCTCCTCTCCTCTCCTCTCCTCTCCTCTC
CCGGTGGCGGCGCGGCCAACTCCAGCCATGTCGGACTCCAAGGCCGCGGCGGCGGTCACC
CTCCGCACCCGCAAGTTCATGACCAACCGCCTCCTCTCCCGCAAGCAATTCGTGCTCGAG
GTGATCCACCCCGGCCGGCCCAACGTCTCCAAGGCTGAGCTGAAGGAGAAGCTGGCCAAG
CTGTACGAGGTGAAGGACGCGAACTGCATCTTCGTGTTCAAGTTCCGCACCCACTTCGGT
GGAGGCAAGTCCACCGGATTCGGCCTCATCTACGATAACCTCGACGCCGCGAAGAAGTAC
GAGCCCAAGTACCGCCTCATCAGGAATGGTCTTGCTACCAAGGTTGAGAAATCTCGCAAG
CAAATGAAAGAACGCAAGAACAGAGCTAAGAAGATCCGTGGTGTCAAGAAGACCAAGGCT
GGTGATGCCGGGAAAAAGAAGTGAAAACTCATTTACATTTGTACTACTGGCTCTGGGAAC
ACTGTTGGGTCTAGTGGCAATGGCGTAATCATGTTTCTGTTAGTTTTTTGTTGTTTTCCC
TCGTCACTGAAGTCAAGTTTTGTGATTGTGGATGGAACTTAGCTAGTTTGGCTATAGCAT
GTTATGATGTTAAATTTATGCTAGCGTTAGAGGTACTCATTGGAAGGCTGTAACTTGTAA
GCCGACCTGTTTTATCTTGCAAATTATTATGTGGTTTGATTATCCCTTTTTCTCCTCAGC