Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0722100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:30102985:30107341:1 gene:Os01g0722100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bacterial transferase hexapeptide repeat domain containing protein. (Os01t0722100-01)
Sequence

ATGGCCGCCGCCGCCACCCGCGCCGTCCGCCGCCTCCTCATCGCCTCGCGGAGTCTCCAC
GCAATCTCTTCCGAGGGAGCGGCGAGGGAGGCGGCCACGAGCTTCGTCCACCCCGCCGCC
GTCGTCCACCCCGACGCCGTCGTCGGACAGGGTGTCTCGATAGGCCCATTTTGCACCGTG
GGAGCTTCAGCGAGGATTGGTGACGCTTGTCAGTTACACGCTGGGAGCCATGTCATGGGA
GATACCGAGCTAGGGGAGAGATGTGTTGTTCTCACTGGCGCTATCCTTGGTTCAGACATT
CCTGGGCAAACCATTATCGGTGAAAACAATGTCATTGGACACCACGCTGTAGTTGGTGTT
AAGTGCCAAGATCTCAAGTATAAGTCAGGAGATGAATGCTTTCTACAGATTGGTAACAAT
AATGAGATCAGAGAGTACTGTTCTATTCATCGCTCTTCTAAATCTTGTGACTGCACGGTT
ATTGGTGACAATAATCTTATAATGGGTTCATGCCATATAGCACATGATTGCAGGATTGGC
AACAATAACATATTTGCTAACAATACTCTATTTGCTGGCCATGTTGTTGTTGAAGATTGC
ACCCATACTGCAGGGGCTGTTGTTGTCCATCAATTTTGTCATATTGGGTCATTTTCATTT
CTAGGTGGAGGCTCTGTGATCGCACAAGATGTGCCAAGATACATGATGGTTGCAGGTGAT
AGAGCAGAGCTTCGTGGGCTGAATCTTGAAGGTCTTAAGCGCAATGGTTTCTCAGACCAA
GAGGTACGGATGTTGAGGAAAGCTTATCAACAAGTATTTATGCCATCTATTAATAGTCAG
AGTAGCTTTGATGAGAGACTTGCTGAACTGGAACGGGAAATTGAGTTATCAGAAACTCAT
GTATCCTATATGGTGGAATCTATTCGCATGTCCTTTGGCCAAGGACGTCGTGGAATTTGC
AAATTTAGAAGTTGGAACCGCTGA

Peptide Sequence

PEP ID

Os01t0722100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:30102985:30107341:1 gene:Os01g0722100 transcript:Os01t0722100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bacterial transferase hexapeptide repeat domain containing protein. (Os01t0722100-01)
Sequence

MAAAATRAVRRLLIASRSLHAISSEGAAREAATSFVHPAAVVHPDAVVGQGVSIGPFCTV
GASARIGDACQLHAGSHVMGDTELGERCVVLTGAILGSDIPGQTIIGENNVIGHHAVVGV
KCQDLKYKSGDECFLQIGNNNEIREYCSIHRSSKSCDCTVIGDNNLIMGSCHIAHDCRIG
NNNIFANNTLFAGHVVVEDCTHTAGAVVVHQFCHIGSFSFLGGGSVIAQDVPRYMMVAGD
RAELRGLNLEGLKRNGFSDQEVRMLRKAYQQVFMPSINSQSSFDERLAELEREIELSETH
VSYMVESIRMSFGQGRRGICKFRSWNR

Transcript Sequence

Transcript ID

Os01t0722100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:30102985:30107341:1 gene:Os01g0722100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bacterial transferase hexapeptide repeat domain containing protein. (Os01t0722100-01)
Sequence

GGTCCCCCCTCTCTCCCCTCCTCCTACCGCTCCCCATGGCCGCCGCCGCCACCCGCGCCG
TCCGCCGCCTCCTCATCGCCTCGCGGAGTCTCCACGCAATCTCTTCCGAGGGAGCGGCGA
GGGAGGCGGCCACGAGCTTCGTCCACCCCGCCGCCGTCGTCCACCCCGACGCCGTCGTCG
GACAGGGTGTCTCGATAGGCCCATTTTGCACCGTGGGAGCTTCAGCGAGGATTGGTGACG
CTTGTCAGTTACACGCTGGGAGCCATGTCATGGGAGATACCGAGCTAGGGGAGAGATGTG
TTGTTCTCACTGGCGCTATCCTTGGTTCAGACATTCCTGGGCAAACCATTATCGGTGAAA
ACAATGTCATTGGACACCACGCTGTAGTTGGTGTTAAGTGCCAAGATCTCAAGTATAAGT
CAGGAGATGAATGCTTTCTACAGATTGGTAACAATAATGAGATCAGAGAGTACTGTTCTA
TTCATCGCTCTTCTAAATCTTGTGACTGCACGGTTATTGGTGACAATAATCTTATAATGG
GTTCATGCCATATAGCACATGATTGCAGGATTGGCAACAATAACATATTTGCTAACAATA
CTCTATTTGCTGGCCATGTTGTTGTTGAAGATTGCACCCATACTGCAGGGGCTGTTGTTG
TCCATCAATTTTGTCATATTGGGTCATTTTCATTTCTAGGTGGAGGCTCTGTGATCGCAC
AAGATGTGCCAAGATACATGATGGTTGCAGGTGATAGAGCAGAGCTTCGTGGGCTGAATC
TTGAAGGTCTTAAGCGCAATGGTTTCTCAGACCAAGAGGTACGGATGTTGAGGAAAGCTT
ATCAACAAGTATTTATGCCATCTATTAATAGTCAGAGTAGCTTTGATGAGAGACTTGCTG
AACTGGAACGGGAAATTGAGTTATCAGAAACTCATGTATCCTATATGGTGGAATCTATTC
GCATGTCCTTTGGCCAAGGACGTCGTGGAATTTGCAAATTTAGAAGTTGGAACCGCTGAA
ATTTCTATAAACTTTCAAGTTTTACTGGCAATTTCCGAGACATCACTTAGGAAGCATCGC
TCATTCTTTGGACTGGGCATGTTTCACATCGTGTTCTTGAAAGAAGTCGCCCATTCTTTG
ACTGTTAAAGCAAGAGTTTCTCGTTGATATTCTAATACCTGAACACAGGAATACATCATA
CAGATGTTGAATGCCCCTTCACTCCAGATTTGACCAAATACTGTCGCATCTGGATATAGG
ACACTTGGAAGTTGCGTGTCGTTTCTTTTTCTTTTTTATTTTCTCTTGAGATGAGATGAG
TAGTGGTGTTCGTGGATGCACAAATGCTCCTTAGTCGTTGTACATATATTTGGCGTTGCC
TCGGTTTTGTTCATCCTGTACAGTGTATGTATGTCGCCTCCTGGATCTCAGGCTCGAATT
TGTATTGTCTGAACGATGTTACTGCTAGTGCTGAGATGGTCCAAAATTTGCATTGGTGTT
CTTCGGACG