Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0720600-03
CDS Infomation	cds chromosome:IRGSP-1.0:1:30032455:30041227:-1 gene:Os01g0720600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SOLUBLE STARCH SYNTHASE IVA description:Similar to Starch synthase IV. (Os01t0720600-01);Starch synthase, Starch biosynthesis (Os01t0720600-02);Similar to starch synthase IV. (Os01t0720600-03);Starch synthase, Starch biosynthesis (Os01t0720600-04)
Sequence	ATGGCGGCTTGCGGCGCCGCGGCGGCGGAGTATTCAGCTCTCCTGTCCCTCTCATGTGGG CCTATCACTCGCCGCCGTTTCGCCGTCTCCTGCCGCGCTCGACCGCCCGGCAACCTCAGT GCACAGCAGAAGAAGAAGCGAGGGAAAAACATTGCTCCAAAACAGCGCTCTTCAAATGCA AAACTCTTGCTTACTACTGAGGAAAATGGACAGCTTCCAAGTACCAGTTTGAGGACTTCT ATGGAACGTCCTCAGAAGAGTACATCCAGTGAGGACGATACCAATGGGGCTATTAGCCAG ATAGATGAAAAAATTGCAGCCATTGGTAATGAACAGCAAGAGAGGTCAAAGGATAAACAT TTCGAATCAGACTTTCAACTTGAAGATTTTGGGGAAATGATACAAAACATGGAAAAGAAT ATTCTGCTCCTAAATCAAGCTCGTCTTCAAGCAATTGAAGATGTTGACAAAATTCTTACT GAAAAGGAAGCTTTGCAGAAAAAGGTTGACACTCTAGAGATGAATTTGTCAAAAGCACTT GCAACCAAAGGGAACATAAATACAGATATCCCTGGTGATCATTTAGAGAAATTTACAAAA GAAATTTTGATAGAAAGTGCTCTAAGTGGAGGCAATCCAGCACATTTGTGTGAGTCTCCA CTTTTCATGGAGCTGACTGTTCTAAAAGAAGAGAATATGCTACTTAAGGCTGACGCACAA TTTCTTAAAGCAAAGATTGTTGAGTTTGCTGAAACAGAGGAATTCCTATTCAAATTGGAG AAAGAAAGGTCACTGTTAGACGCTACAGTTAGGGAGCTGGAAGCTAGGTTTCTAGTTGCT CAAACTGATATCTGGAAAGTTGTCCCTCTGCAATATGATGTTTGGATGGAGAAAGTAGAA AATCTGCAACACATGCTTGGATGTTTGAAAAATCATGTAGAGAAGTATGCTGCATTGTTG GATCAGCATGATGATCTGCATGACAAGATTGATGAGCTAGAAGCATCACTAAAAGAAGGG AAAACATCTGAGTTTTCTCCTTATGTTGTTGAACTTCTGCAACAGAAGTTGAAAGCAGCA AAAAGCCATCACCAAGCAGGCCATCAAGAAACAAACACTCACATTCAAGTATATCAGCAG TTAACTGAGGAATTTCAAGATAACCTAGGTAAACTAATAGAAGAAAGTGGCAGACTGGAG CATTCTGCAAATAGTATGCCATCAGAATTCTGGAGTCACATCCTGCTCATGATTGATGGT TGGTTCCTTGAGCGGAAAATACCAAATACTGATGCACGTATGCTGAGAGAAATGGCATGG AAGAGAGATGACCGTATCTGTGAAGCCTACTTTGCTTGCAAGGGTGCAAAAGAAAGTGAT GTTATGGAAACTTTCCTAAAGCTATCGTTATCAGGAAACAGTCAATGCAGTTCTGGCTTG CACATTGTCCATATAGCAGCAGAGATGGCTCCAGTGGCAAAGGTTGGCGGTCTGGCAGAT GTAGTTGCTGGTCTTGGCAAGGCACTTCAGACTAAGGGACATTTAGTAGAGATTGTTCTT CCCAAATACGACTGTATGCAACTTGACCAGATTACTAATCTTAAGGTTTTAGATGTTGTC ATACAATCCTATTTTGATGGAAATCTATTCAGCAACAACGTGTGGACAGGAACTGTTGAA GGTCTTCCAGTCTATTTTATTGAGCCACAGCATCCTTCAAAATTCTTCTGGAGGGCCCAA TACTATGGAGAGCATGACGATTTTAAACGTTATTCATACTTTAGCCGTGCAGCACTGGAA TTACTTTACCAATCTGGGAAGAAAATTGATATAATCCACTGCCATGACTGGCAAACTGCA TTTGTTGCACCTCTATATTGGGATATATATGCAACTCGAGGCTTCAGCTCAGCTAGAATT TGTTTCACTTGCCACAACTTCGAATACCAAGGTACAGCACCTGCTCCTGATTTATCATAT TGCGGCCTTGATGTTGAGCAGTTGGATAGACCAGACAGGATGCAAGACAATGCACATGGA AGAATAAATGTTGCCAAGGGTGGAATTGTTTATTCCAATATTGTGACAACTGTATCACCA ACATATGCTTTAGAAGTGCGCTCAGAGGGTGGTCGTGGTCTCCAAGATACACTTAAAATG CATTCCAGGAAATTTGTGGGGATACTTAATGGAATCGACACAGGAACATGGAACCCTTCC ACAGACAGATTTCTTGCTGTGCAATATAGTGCTACTGATCTTCAGGGGAAAGCAGCAAAC AAAGCATTTCTCAGGAAGCAGCTAGGGCTGTATTCTGAGGATGCCTCTCAACCACTGGTA GCCTGCATTACGAGGCTAGTTCCTCAAAAGGGTCTACATCTTATCAGGCATGCAATATAC AAAACAGCTGAGTTAGGAGGACAGTTTGTACTCCTGGGTTCAAGTCCAGTTCCACATATT CAGAGGGAATTTGAGGGTGTTGCAGACCAATTCCAGAAGAATAACAATATTAGGTTAATT CTGAAATATGATGAAGCTTTGTCTCATTGTATTTATGCGGCATCTGACATGTTTATCATT CCATCAATGTTTGAGCCTTGTGGCCTTACTCAGATGATAGCTATGAGATATGGTTCTGTG CCAATTGTTCGACAAACTGGTGGATTGTGTGATAGGTGA

Peptide Sequence

PEP ID	Os01t0720600-03
PEP Infomation	pep chromosome:IRGSP-1.0:1:30032455:30041227:-1 gene:Os01g0720600 transcript:Os01t0720600-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SOLUBLE STARCH SYNTHASE IVA description:Similar to Starch synthase IV. (Os01t0720600-01);Starch synthase, Starch biosynthesis (Os01t0720600-02);Similar to starch synthase IV. (Os01t0720600-03);Starch synthase, Starch biosynthesis (Os01t0720600-04)
Sequence	MAACGAAAAEYSALLSLSCGPITRRRFAVSCRARPPGNLSAQQKKKRGKNIAPKQRSSNA KLLLTTEENGQLPSTSLRTSMERPQKSTSSEDDTNGAISQIDEKIAAIGNEQQERSKDKH FESDFQLEDFGEMIQNMEKNILLLNQARLQAIEDVDKILTEKEALQKKVDTLEMNLSKAL ATKGNINTDIPGDHLEKFTKEILIESALSGGNPAHLCESPLFMELTVLKEENMLLKADAQ FLKAKIVEFAETEEFLFKLEKERSLLDATVRELEARFLVAQTDIWKVVPLQYDVWMEKVE NLQHMLGCLKNHVEKYAALLDQHDDLHDKIDELEASLKEGKTSEFSPYVVELLQQKLKAA KSHHQAGHQETNTHIQVYQQLTEEFQDNLGKLIEESGRLEHSANSMPSEFWSHILLMIDG WFLERKIPNTDARMLREMAWKRDDRICEAYFACKGAKESDVMETFLKLSLSGNSQCSSGL HIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDVV IQSYFDGNLFSNNVWTGTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRYSYFSRAALE LLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRGFSSARICFTCHNFEYQGTAPAPDLSY CGLDVEQLDRPDRMQDNAHGRINVAKGGIVYSNIVTTVSPTYALEVRSEGGRGLQDTLKM HSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLYSEDASQPLV ACITRLVPQKGLHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGVADQFQKNNNIRLI LKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRQTGGLCDR

Transcript Sequence

Transcript ID	Os01t0720600-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:30032455:30041227:-1 gene:Os01g0720600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SOLUBLE STARCH SYNTHASE IVA description:Similar to Starch synthase IV. (Os01t0720600-01);Starch synthase, Starch biosynthesis (Os01t0720600-02);Similar to starch synthase IV. (Os01t0720600-03);Starch synthase, Starch biosynthesis (Os01t0720600-04)
Sequence	ACTCCAGTCCACAGCACTAACCCATCGGTCCCGGCGATCCCCACTAGTGCCCCTCCTCGC CCGCTTGCCATGGCGGCTTGCGGCGCCGCGGCGGCGGAGTATTCAGCTCTCCTGTCCCTC TCATGTGGGCCTATCACTCGCCGCCGTTTCGCCGTCTCCTGCCGCGCTCGACCGCCCGGC AACCTCAGTGCACAGCAGAAGAAGAAGCGAGGGAAAAACATTGCTCCAAAACAGCGCTCT TCAAATGCAAAACTCTTGCTTACTACTGAGGAAAATGGACAGCTTCCAAGTACCAGTTTG AGGACTTCTATGGAACGTCCTCAGAAGAGTACATCCAGTGAGGACGATACCAATGGGGCT ATTAGCCAGATAGATGAAAAAATTGCAGCCATTGGTAATGAACAGCAAGAGAGGTCAAAG GATAAACATTTCGAATCAGACTTTCAACTTGAAGATTTTGGGGAAATGATACAAAACATG GAAAAGAATATTCTGCTCCTAAATCAAGCTCGTCTTCAAGCAATTGAAGATGTTGACAAA ATTCTTACTGAAAAGGAAGCTTTGCAGAAAAAGGTTGACACTCTAGAGATGAATTTGTCA AAAGCACTTGCAACCAAAGGGAACATAAATACAGATATCCCTGGTGATCATTTAGAGAAA TTTACAAAAGAAATTTTGATAGAAAGTGCTCTAAGTGGAGGCAATCCAGCACATTTGTGT GAGTCTCCACTTTTCATGGAGCTGACTGTTCTAAAAGAAGAGAATATGCTACTTAAGGCT GACGCACAATTTCTTAAAGCAAAGATTGTTGAGTTTGCTGAAACAGAGGAATTCCTATTC AAATTGGAGAAAGAAAGGTCACTGTTAGACGCTACAGTTAGGGAGCTGGAAGCTAGGTTT CTAGTTGCTCAAACTGATATCTGGAAAGTTGTCCCTCTGCAATATGATGTTTGGATGGAG AAAGTAGAAAATCTGCAACACATGCTTGGATGTTTGAAAAATCATGTAGAGAAGTATGCT GCATTGTTGGATCAGCATGATGATCTGCATGACAAGATTGATGAGCTAGAAGCATCACTA AAAGAAGGGAAAACATCTGAGTTTTCTCCTTATGTTGTTGAACTTCTGCAACAGAAGTTG AAAGCAGCAAAAAGCCATCACCAAGCAGGCCATCAAGAAACAAACACTCACATTCAAGTA TATCAGCAGTTAACTGAGGAATTTCAAGATAACCTAGGTAAACTAATAGAAGAAAGTGGC AGACTGGAGCATTCTGCAAATAGTATGCCATCAGAATTCTGGAGTCACATCCTGCTCATG ATTGATGGTTGGTTCCTTGAGCGGAAAATACCAAATACTGATGCACGTATGCTGAGAGAA ATGGCATGGAAGAGAGATGACCGTATCTGTGAAGCCTACTTTGCTTGCAAGGGTGCAAAA GAAAGTGATGTTATGGAAACTTTCCTAAAGCTATCGTTATCAGGAAACAGTCAATGCAGT TCTGGCTTGCACATTGTCCATATAGCAGCAGAGATGGCTCCAGTGGCAAAGGTTGGCGGT CTGGCAGATGTAGTTGCTGGTCTTGGCAAGGCACTTCAGACTAAGGGACATTTAGTAGAG ATTGTTCTTCCCAAATACGACTGTATGCAACTTGACCAGATTACTAATCTTAAGGTTTTA GATGTTGTCATACAATCCTATTTTGATGGAAATCTATTCAGCAACAACGTGTGGACAGGA ACTGTTGAAGGTCTTCCAGTCTATTTTATTGAGCCACAGCATCCTTCAAAATTCTTCTGG AGGGCCCAATACTATGGAGAGCATGACGATTTTAAACGTTATTCATACTTTAGCCGTGCA GCACTGGAATTACTTTACCAATCTGGGAAGAAAATTGATATAATCCACTGCCATGACTGG CAAACTGCATTTGTTGCACCTCTATATTGGGATATATATGCAACTCGAGGCTTCAGCTCA GCTAGAATTTGTTTCACTTGCCACAACTTCGAATACCAAGGTACAGCACCTGCTCCTGAT TTATCATATTGCGGCCTTGATGTTGAGCAGTTGGATAGACCAGACAGGATGCAAGACAAT GCACATGGAAGAATAAATGTTGCCAAGGGTGGAATTGTTTATTCCAATATTGTGACAACT GTATCACCAACATATGCTTTAGAAGTGCGCTCAGAGGGTGGTCGTGGTCTCCAAGATACA CTTAAAATGCATTCCAGGAAATTTGTGGGGATACTTAATGGAATCGACACAGGAACATGG AACCCTTCCACAGACAGATTTCTTGCTGTGCAATATAGTGCTACTGATCTTCAGGGGAAA GCAGCAAACAAAGCATTTCTCAGGAAGCAGCTAGGGCTGTATTCTGAGGATGCCTCTCAA CCACTGGTAGCCTGCATTACGAGGCTAGTTCCTCAAAAGGGTCTACATCTTATCAGGCAT GCAATATACAAAACAGCTGAGTTAGGAGGACAGTTTGTACTCCTGGGTTCAAGTCCAGTT CCACATATTCAGAGGGAATTTGAGGGTGTTGCAGACCAATTCCAGAAGAATAACAATATT AGGTTAATTCTGAAATATGATGAAGCTTTGTCTCATTGTATTTATGCGGCATCTGACATG TTTATCATTCCATCAATGTTTGAGCCTTGTGGCCTTACTCAGATGATAGCTATGAGATAT GGTTCTGTGCCAATTGTTCGACAAACTGGTGGATTGTGTGATAGGTGATTTCTCCCTCAA ACATTTCCTTTGCATAGTATATTCTGATATATCTGTTGTGTTCTACTTTTCCAGTGTTTT TGATTTTGATGATGAAACTATACCTGTGGAGCTGCGGAATGGCTTTACATTTGCTAGGAC TGATGAGCAGGATCTAAGCAGTTGCTTGGAAAGGGCATTCAGCTACTACAGCAGAAAACC TATGGTTTGGAAACAGTTAGTGCAGAAGGATATGCAGATTGATTTCAGCTGGGATTCTCC AGCTTCACAGTACGAAAACCTTTATCAGAGTGCTGTTGCTCAGGCAAGGGGAGCGGCTCA AACATAAACCTTTTCATGATGACATTGTGAGCTTAGATTCTCCCAAGCGCAGAGACAATC GTCAGTTTTATCATATCTGAACCAGGCATATGCTGAAGAAATATTGTTCTTCTCACATTC ACAGAATTCACACATCGTGATCCTTGCTGTTGCCATTCCCGAAAGAACTGAGAAAGAGTA GTCTTACAGTTGATCAAGATATTGCATTTTGCAGTCAGTGCACGGAACTAGTTCTGGGTT TAATGGGGATGAGTAATCATAATCTATACTGGATTGCCCCCCTCTAAATTCCCCCCAACC GTTAGTTTTTGTGGGAATGCAAGAAGTAAATATGTGCACTGTAGGGTGACATTCGCATAC ATGATACTGTACGGTTTATTCAGATCAACGTTTGGG