Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0720500-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:30030998:30032054:1 gene:Os01g0720500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Type I chlorophyll a/b-binding protein b (Fragment). (Os01t0720500-01);Non-protein coding transcript. (Os01t0720500-02)
Sequence	ATGGCGGCGTCCACCATGGCACTCTCCTCCCCTGCCGCCCTCGCCGGCAAGGCGGTCGCC AATGCCAAGGTGTTCGGCGAGGGCCGCGTCACGATGCGCAAGTCGGCGGCCAAGCCCAAG CCCGCCGCGGCGTCGGGGAGCCCGTGGTACGGCGCCGACCGCGTGCTCTACCTCGGCCCG CTCTCCGGCGAGCCGCCGTCCTACCTCACCGGCGAGTTCCCCGGCGACTACGGCTGGGAC ACCGCCGGGCTGTCGGCCGACCCGGAGACGTTCGCCAAGAACCGGGAGCTGGAGGTGATC CACTGCCGGTGGGCCATGCTGGGCGCGCTCGGCTGCGTCTTCCCGGAGCTCCTCGCCCGC AACGGCGTGAAGTTCGGCGAGGCCGTGTGGTTCAAGGCGGGGTCCCAGATCTTCAGCGAG GGGGGGCTCGACTACCTCGGCAACCCCAGCCTGATCCACGCGCAGAGCATCCTGGCGATC TGGGGTTGCCAGGTCGTGCTCATGGGCGCCGTCGAGGGGTACCGCGTCGCCGGCGGCCCG CTCGGCGAGGTCGTCGACCCGCTCTACCCCGGCGGCAGCTTCGACCCGCTCGGCCTCGCC GACGACCCCGAGGCGTTCGCCGAGCTCAAGGTGAAGGAGATCAAGAACGGCCGCCTCGCC ATGTTCTCCATGTTCGGGTTCTTCGTCCAGGCCATCGTCACCGGCAAGGGGCCACTGGAG AACCTGGCCGACCACCTCGCCGACCCCGTCAACAACAACGCATGGGCCTACGCCACCAAC TTCGTCCCCGGCAAGTGA

Peptide Sequence

PEP ID	Os01t0720500-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:30030998:30032054:1 gene:Os01g0720500 transcript:Os01t0720500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Type I chlorophyll a/b-binding protein b (Fragment). (Os01t0720500-01);Non-protein coding transcript. (Os01t0720500-02)
Sequence	MAASTMALSSPAALAGKAVANAKVFGEGRVTMRKSAAKPKPAAASGSPWYGADRVLYLGP LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWGCQVVLMGAVEGYRVAGGP LGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE NLADHLADPVNNNAWAYATNFVPGK

Transcript Sequence

Transcript ID	Os01t0720500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:30030998:30032054:1 gene:Os01g0720500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Type I chlorophyll a/b-binding protein b (Fragment). (Os01t0720500-01);Non-protein coding transcript. (Os01t0720500-02)
Sequence	TCACCACAGCAGCTCACGAGCTCAAAAGACACACATTCCAAAAGCATCTGTGGCCATCTC CTCCTAGTCCTAGGCTCGCGTCAATGGCGGCGTCCACCATGGCACTCTCCTCCCCTGCCG CCCTCGCCGGCAAGGCGGTCGCCAATGCCAAGGTGTTCGGCGAGGGCCGCGTCACGATGC GCAAGTCGGCGGCCAAGCCCAAGCCCGCCGCGGCGTCGGGGAGCCCGTGGTACGGCGCCG ACCGCGTGCTCTACCTCGGCCCGCTCTCCGGCGAGCCGCCGTCCTACCTCACCGGCGAGT TCCCCGGCGACTACGGCTGGGACACCGCCGGGCTGTCGGCCGACCCGGAGACGTTCGCCA AGAACCGGGAGCTGGAGGTGATCCACTGCCGGTGGGCCATGCTGGGCGCGCTCGGCTGCG TCTTCCCGGAGCTCCTCGCCCGCAACGGCGTGAAGTTCGGCGAGGCCGTGTGGTTCAAGG CGGGGTCCCAGATCTTCAGCGAGGGGGGGCTCGACTACCTCGGCAACCCCAGCCTGATCC ACGCGCAGAGCATCCTGGCGATCTGGGGTTGCCAGGTCGTGCTCATGGGCGCCGTCGAGG GGTACCGCGTCGCCGGCGGCCCGCTCGGCGAGGTCGTCGACCCGCTCTACCCCGGCGGCA GCTTCGACCCGCTCGGCCTCGCCGACGACCCCGAGGCGTTCGCCGAGCTCAAGGTGAAGG AGATCAAGAACGGCCGCCTCGCCATGTTCTCCATGTTCGGGTTCTTCGTCCAGGCCATCG TCACCGGCAAGGGGCCACTGGAGAACCTGGCCGACCACCTCGCCGACCCCGTCAACAACA ACGCATGGGCCTACGCCACCAACTTCGTCCCCGGCAAGTGAGTGTGGATCTCCGGCGAGC AACGGCGGTGAGGTCCATTGCTTTCATGCAGGCTGCGGTGAGACGCGCGACGTTCTCCTC TTTCCGCGTACCCGAATATTTGCTTCGTTCGTTCAGATTGTGTAAAACAATGTTATCTGG TTGGTTGATGAAAGAAGTACAATGGACCTGATTGTGT