Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0720400-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:30025366:30026465:-1 gene:Os01g0720400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:acid phosphatase 1 description:HAD-superfamily subfamily IB hydrolase, hypothetical 1 protein. (Os01t0720400-01)
Sequence

ATGGCCGGGATCGTGGTGGTGTTCGACTTCGACAAGACGATCATCGACGTCGACAGCGAC
AACTGGGTCGTGGACGGGCTCGGCGCGACGGAGGAGTTCGAGCGGCTGCTGCCCACCATG
CCGTGGAACACCCTCATGGACACCATGATGGGCGAGCTCCACGCGAGCGGCAAGTCGCTC
GCCGACGTCGCGGGCGTGCTCAGGTCGGCGCCGCTCGACCCGCGCGTCGTCGCCGCCATC
AAGGCCTGCTACGGCCTGGGCTGCGACCTCCGGATCCTCAGCGACGCCAACCGCTTCTTC
ATCGACACCATCCTCGACCACCACGGCCTCACGGGTTACTTCTCCGAGATCAACACCAAC
CCGAGCGCCGTCGACGCCGCCACCGGCCGCCTCCGCATCGCGCCGTACCACGACTTCCAC
GCCGGCCCGCACGGGTGCGGCCTCGGGATCTGCCCGCCCAACATGTGCAAGGGCCAGGTG
CTCGACCGCATCCGCGCCTCCGCCGGCGCCGCCGGCAAGAGGGTCATCTACCTCGGTGAC
GGCCGCGGCGACTACTGCCCGTCGCTCCGCCTCGGCCGCGACGACTTCATGATGCCACGC
AGGGGCTTCCCCGTGTGGGAGCTCATCTGCGAGGACCCGTCGCTGCTCCACGCGGAGGTG
CACTCGTGGGCCGACGGCGCCGAGATGGAGGAGACGCTGCTGCGGCTGGTCGGCAGGGTG
CTCCTCGAGGAGAGGAACCTGCCGCCGCTCGACTGCAAGCTCGAGTCGTTGCCGGCCGTC
GCCGTGCAGGACGGCATGCCCATGACGCTCCGGATCAAGAACTGA

Peptide Sequence

PEP ID

Os01t0720400-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:30025366:30026465:-1 gene:Os01g0720400 transcript:Os01t0720400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:acid phosphatase 1 description:HAD-superfamily subfamily IB hydrolase, hypothetical 1 protein. (Os01t0720400-01)
Sequence

MAGIVVVFDFDKTIIDVDSDNWVVDGLGATEEFERLLPTMPWNTLMDTMMGELHASGKSL
ADVAGVLRSAPLDPRVVAAIKACYGLGCDLRILSDANRFFIDTILDHHGLTGYFSEINTN
PSAVDAATGRLRIAPYHDFHAGPHGCGLGICPPNMCKGQVLDRIRASAGAAGKRVIYLGD
GRGDYCPSLRLGRDDFMMPRRGFPVWELICEDPSLLHAEVHSWADGAEMEETLLRLVGRV
LLEERNLPPLDCKLESLPAVAVQDGMPMTLRIKN

Transcript Sequence

Transcript ID

Os01t0720400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:30025366:30026465:-1 gene:Os01g0720400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:acid phosphatase 1 description:HAD-superfamily subfamily IB hydrolase, hypothetical 1 protein. (Os01t0720400-01)
Sequence

ATCAGATCAAAGCAAGCAAACAACAACAAAAACCACTTCTCGTGGGTAGAAGAGAGAGAG
AGCGAGGCGATTTCGACCAAGAAGATGGCCGGGATCGTGGTGGTGTTCGACTTCGACAAG
ACGATCATCGACGTCGACAGCGACAACTGGGTCGTGGACGGGCTCGGCGCGACGGAGGAG
TTCGAGCGGCTGCTGCCCACCATGCCGTGGAACACCCTCATGGACACCATGATGGGCGAG
CTCCACGCGAGCGGCAAGTCGCTCGCCGACGTCGCGGGCGTGCTCAGGTCGGCGCCGCTC
GACCCGCGCGTCGTCGCCGCCATCAAGGCCTGCTACGGCCTGGGCTGCGACCTCCGGATC
CTCAGCGACGCCAACCGCTTCTTCATCGACACCATCCTCGACCACCACGGCCTCACGGGT
TACTTCTCCGAGATCAACACCAACCCGAGCGCCGTCGACGCCGCCACCGGCCGCCTCCGC
ATCGCGCCGTACCACGACTTCCACGCCGGCCCGCACGGGTGCGGCCTCGGGATCTGCCCG
CCCAACATGTGCAAGGGCCAGGTGCTCGACCGCATCCGCGCCTCCGCCGGCGCCGCCGGC
AAGAGGGTCATCTACCTCGGTGACGGCCGCGGCGACTACTGCCCGTCGCTCCGCCTCGGC
CGCGACGACTTCATGATGCCACGCAGGGGCTTCCCCGTGTGGGAGCTCATCTGCGAGGAC
CCGTCGCTGCTCCACGCGGAGGTGCACTCGTGGGCCGACGGCGCCGAGATGGAGGAGACG
CTGCTGCGGCTGGTCGGCAGGGTGCTCCTCGAGGAGAGGAACCTGCCGCCGCTCGACTGC
AAGCTCGAGTCGTTGCCGGCCGTCGCCGTGCAGGACGGCATGCCCATGACGCTCCGGATC
AAGAACTGATCAATGGCGGCGACGAACGTACGCATGATTTCGAGCGCGAAACGGCTAGCT
CGAACAATGTGTGTGTGAGGATTGCGATACGGGTATAATTTTAACTATTGACTGATTTTT
GCGCTACGCGTGATTGAGCCTGCGATTAGTAGAGGCTCATTGTATCTTGTCCGATCAATT
GAAGTAAAACATTTGGCTTG