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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0719600-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:30003535:30005888:1 gene:Os01g0719600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os01t0719600-01)
Sequence

ATGGGGAGGAAGCTAGGTTTTGAGAAGGTCCTCGACTGCTTCTCCCTCGCTCTCTGCACG
AACGCCTGCGTCTGCATACATTCGGTGGAAGACGACGAGGAGGAGGCCATCGAGAGGGAG
GCGCTGGTGAGCTCTCAGCTGGAAGAGCTTGTGAAGCTCAAGGATCTCGTCGGCGGAGCC
AAGACTCTCGCTTTCCATCTAGAGCCAAAGACCGTGGAGCTCAGGGTGTCCATGCACTGC
TACGGATGCGCCAAGAAAGTTCAGAAGCATATATCCAAGATGGACGGTGTTACGTCGTTT
GAGGTAGATCTAGAGAGTAAGAAGGTGGTGGTGATAGGGGATATCACGCCGTATGAGGTG
CTGGCGAGCGTCTCCAAGGTGATGAAGTTTGCAGAGCTGTGGGTGGCCCCCAACTCCCAA
GGTTGCTAG

Peptide Sequence

PEP ID

Os01t0719600-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:30003535:30005888:1 gene:Os01g0719600 transcript:Os01t0719600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os01t0719600-01)
Sequence

MGRKLGFEKVLDCFSLALCTNACVCIHSVEDDEEEAIEREALVSSQLEELVKLKDLVGGA
KTLAFHLEPKTVELRVSMHCYGCAKKVQKHISKMDGVTSFEVDLESKKVVVIGDITPYEV
LASVSKVMKFAELWVAPNSQGC

Transcript Sequence

Transcript ID

Os01t0719600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:30003535:30005888:1 gene:Os01g0719600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os01t0719600-01)
Sequence

GGGCAATAGCCCACTTCAATACTGCTACAGCTTGTATATATGCCTCTTCCCTGACCTCAT
TCCAAGCGCTTTGGTAGGTCTACTGGCTCAGCTCGCATATCTACTTGTCTCTTCTCGCGC
AAAGCTGTGCCATTCTTCACATTATCCCCTGCGCAGCAGAGCCCAGCCAATCTTGGCGAG
AGGCAGTAGACATTGGCTGCTTTTTTTTCAAAAGGATTGCACTTTGTGAGAGATGGGGAG
GAAGCTAGGTTTTGAGAAGGTCCTCGACTGCTTCTCCCTCGCTCTCTGCACGAACGCCTG
CGTCTGCATACATTCGGTGGAAGACGACGAGGAGGAGGCCATCGAGAGGGAGGCGCTGGT
GAGCTCTCAGCTGGAAGAGCTTGTGAAGCTCAAGGATCTCGTCGGCGGAGCCAAGACTCT
CGCTTTCCATCTAGAGCCAAAGACCGTGGAGCTCAGGGTGTCCATGCACTGCTACGGATG
CGCCAAGAAAGTTCAGAAGCATATATCCAAGATGGACGGTGTTACGTCGTTTGAGGTAGA
TCTAGAGAGTAAGAAGGTGGTGGTGATAGGGGATATCACGCCGTATGAGGTGCTGGCGAG
CGTCTCCAAGGTGATGAAGTTTGCAGAGCTGTGGGTGGCCCCCAACTCCCAAGGTTGCTA
GCTAAGCTAGTAGTAGAATGATAGATCGGCGGGGATAATACATATATGTGAGATCTCGTC
GCGTCAAGTATTCAAGTGTATGGTACGCCATGGGGTCGTGCCTTCTCGTCCGTCTCGGTC
TTGAACGCATCGCGTGCACATATACAGAAGCACCGTCAGGATTGATCAGGAAATGTAACT
AGGGAAGAAGCGCCATTTTC