Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0719400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:29995196:29999996:1 gene:Os01g0719400 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASC3/Barentsz eIF4AIII binding domain containing protein. (Os01t0719400-01)
Sequence	ATGGCCGAGAAGGAGGAGGCGGAGGAGGAGGTGGAGGATGAGGAGGAGTACGAGAGCGAC CTCGACGACGCGCCCCTACCGGCGGTGAGGCGACGCGCCGCGGCGAGCGACGACGAGGAG GGCGGCGGCGCGTCGGGTTCATCGGCGCCGTGGAGCGTGGCGGGGTCGGACCTCGACTCC TACTCCGACTCCGACGGGCAGGGCGCCGCGGAGATGTACGACGACGAGGAGGAGGGGTCC GAGGAACGCGATGAGTTGGAGGCGGGAGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGT GTTGGGGGAGGAGAGGCACTTGAGGACGAGGGGAAGTGCGCCGACGAAGAAGCGCTTGAG GACGAGGGGAGGTACGGCGACGAGGAAGCGGATGGCGTGGTCGCGGCACTTGGGGACGAG GGTAAGTGCGACGGTGAGGAGGCGGAGGTGGAAGCCGCGGTGGAAGGAGCGGAGGTGGTG AACAAGGAGGGCGAGGCCCAGGCCGTACCAACGATAGGCGCCTTCTACATGCACGATGAC CGTTTCCGTGACCCGGAGAATGGCAGGCACGGGAGCCAAAGGAAAAATTTCGGTGGCCAA AAGTTATGGTATCCTAAAGATGATAACGTATGGGCGCATGATAGGTTTTATGAGATGAAT TCCCATCATGATAGGCTTTATGAGACGAACTCCCATAACTCTCCAAATGACAGTGGAAGG GGACCAAGAGGCTCTTTTAGAGCATGGGGTGGGGATAGAACACATCGTTATGATCATGGC TATCTTGAAAGAACTTTATCCCAATCTTACTATCATGATGATAGAGAAGAGTACAAGTAT GTCCCAAAGGAACCACGTACTTTCTTTGCTACCACCAGGGACCACATTAGCTTTCTGAAA GAATCCAACAATATGTATGGCAGTGCCAATAACTACAAAAGAGTTCCAAGTAAATTTCAC ACTTACTATGATCATGGTGATACCAAGAATTTTGCCTATGTTCAAAGAGAATCACATACC TATTATGGCAATGCTAAAGATTTCACCAGTGCACACGATGGTTACAGGGGGGGAGTTTCT AACCCGTATGTATCTCATTGGAGGAGTGATCCAGAGATATGTTCAGGACAATATATTAGA TCTCAGAATGAAGAGGCTTCTTCCAATGCAGAAGGGGGAAAAGTATCCCTCTCAAACTCT GGGTTTCCAAACTGA

Peptide Sequence

PEP ID	Os01t0719400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:29995196:29999996:1 gene:Os01g0719400 transcript:Os01t0719400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASC3/Barentsz eIF4AIII binding domain containing protein. (Os01t0719400-01)
Sequence	MAEKEEAEEEVEDEEEYESDLDDAPLPAVRRRAAASDDEEGGGASGSSAPWSVAGSDLDS YSDSDGQGAAEMYDDEEEGSEERDELEAGGGGGGGGGGGGVGGGEALEDEGKCADEEALE DEGRYGDEEADGVVAALGDEGKCDGEEAEVEAAVEGAEVVNKEGEAQAVPTIGAFYMHDD RFRDPENGRHGSQRKNFGGQKLWYPKDDNVWAHDRFYEMNSHHDRLYETNSHNSPNDSGR GPRGSFRAWGGDRTHRYDHGYLERTLSQSYYHDDREEYKYVPKEPRTFFATTRDHISFLK ESNNMYGSANNYKRVPSKFHTYYDHGDTKNFAYVQRESHTYYGNAKDFTSAHDGYRGGVS NPYVSHWRSDPEICSGQYIRSQNEEASSNAEGGKVSLSNSGFPN

Transcript Sequence

Transcript ID	Os01t0719400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:29995196:29999996:1 gene:Os01g0719400 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASC3/Barentsz eIF4AIII binding domain containing protein. (Os01t0719400-01)
Sequence	AAAGCAAAAAGGTGGTTAATCGAGCCAATGCGCGGAGGCGGAACAGCAACGCGAGCCCGA GAAGCCTCTCGAACCTTCTAGATTCCCCCAAACCCTAAGCTTAAACCCTAGCGTCCTCTC CCGATTGTTCGCCCCCGCGGCATCTCGATCGACGGCGCCCATGGCCGAGAAGGAGGAGGC GGAGGAGGAGGTGGAGGATGAGGAGGAGTACGAGAGCGACCTCGACGACGCGCCCCTACC GGCGGTGAGGCGACGCGCCGCGGCGAGCGACGACGAGGAGGGCGGCGGCGCGTCGGGTTC ATCGGCGCCGTGGAGCGTGGCGGGGTCGGACCTCGACTCCTACTCCGACTCCGACGGGCA GGGCGCCGCGGAGATGTACGACGACGAGGAGGAGGGGTCCGAGGAACGCGATGAGTTGGA GGCGGGAGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGTTGGGGGAGGAGAGGCACT TGAGGACGAGGGGAAGTGCGCCGACGAAGAAGCGCTTGAGGACGAGGGGAGGTACGGCGA CGAGGAAGCGGATGGCGTGGTCGCGGCACTTGGGGACGAGGGTAAGTGCGACGGTGAGGA GGCGGAGGTGGAAGCCGCGGTGGAAGGAGCGGAGGTGGTGAACAAGGAGGGCGAGGCCCA GGCCGTACCAACGATAGGCGCCTTCTACATGCACGATGACCGTTTCCGTGACCCGGAGAA TGGCAGGCACGGGAGCCAAAGGAAAAATTTCGGTGGCCAAAAGTTATGGTATCCTAAAGA TGATAACGTATGGGCGCATGATAGGTTTTATGAGATGAATTCCCATCATGATAGGCTTTA TGAGACGAACTCCCATAACTCTCCAAATGACAGTGGAAGGGGACCAAGAGGCTCTTTTAG AGCATGGGGTGGGGATAGAACACATCGTTATGATCATGGCTATCTTGAAAGAACTTTATC CCAATCTTACTATCATGATGATAGAGAAGAGTACAAGTATGTCCCAAAGGAACCACGTAC TTTCTTTGCTACCACCAGGGACCACATTAGCTTTCTGAAAGAATCCAACAATATGTATGG CAGTGCCAATAACTACAAAAGAGTTCCAAGTAAATTTCACACTTACTATGATCATGGTGA TACCAAGAATTTTGCCTATGTTCAAAGAGAATCACATACCTATTATGGCAATGCTAAAGA TTTCACCAGTGCACACGATGGTTACAGGGGGGGAGTTTCTAACCCGTATGTATCTCATTG GAGGAGTGATCCAGAGATATGTTCAGGACAATATATTAGATCTCAGAATGAAGAGGCTTC TTCCAATGCAGAAGGGGGAAAAGTATCCCTCTCAAACTCTGGGTTTCCAAACTGAAAAAA ACTTTCCCATGAAGCAAACTTCTCCATCAAACTTGAATTCAGCTTCACCATCCTTTTACC ATTCTAGATCATCTCATCAGGAACAACCTTTTATTCAGAGAGGGAAAGCGCGAGCTGTGA TGTTTAGTAAACTCTTCACATCCTCTGTCCGTATGGCTCATAATTCTCTGAAGCCACAAT CGCGTCCTGTTTATAGAGTGAAGGCTGTTGTTCCATCTGGTAGAGGGAACACTCTTGATT CTCTTAGCACAAATGCTATGGAGGAAATTGATAATCCTGGCTCAAATTTATCTGGATCAG CATCAGACAACTACATCCAATATTCAAAATCCAGTGATAAAGGAACAGGTTTGACCTTTC TTTTAGTGCACAAAGAGCATTTCTTGTTCAACAAATGGTCAAGCAATTGGCTCTTATGCA CAGTCCTATAATGCAGTTTATCAGGAAAGGTCAATTCATCGACCATTTCAATCCACATCA AGGGTGTCTACTCTGGTGTTTTGTCCGAAACCTCTCAGTACCACCCAAATTCAATCTCAT GTGACAAGTTCAAATGAAGATATTGAGACAAGTATGTCCCCTGGTTTAGTCAATTCTTTA GTGTCATCTGCAGTGAAGACTGAGCTAAAAGAGGAGGTGGAGGGGCCCTCTTTTACTTAT GATGAAGGTCATGTTCATGGTGTTACAGGAGCAAGGGGCCTTACACTCAGTGACAAAGCT TTGCAGTTCAGTGGACAACATCCTAGGGGACCTGATACCCCTTTCATTGGCAGGACTCTG CCTAGATTTGTGGTTCGACAACTAGTCGGTGGCAGTTCTGAAATGAATCAAATGACATGG CTGCTAGTATCGTCTAGTTCTACTGGGGCTCCGGGAGCAACACATAATCCACCACATTTT GGCAGCTATTACCCCCAACCTTCTGAACTTGTGCCCTCATTGGTATCTCCAAGGTAAATA TAAAGTTTTTTGTACATTACATAATTGGATTGCAGATTTTATAATTCAACCCTGATACGT ATATATGTTAGATTGTTAGGGTACGATCATGTATTCATATCAGAAAGCTAGCTTGTATTT GGTGAACCAGAATAGTAATTGCGTCAGTGTCTGCCAAGGGTACTGTATTTCTGATTATGT TTTAAATATTTAGATAGTATTCAATGCAGATTTTTTAATAA