Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0715900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:29786136:29788237:-1 gene:Os01g0715900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0715900-01)
Sequence	ATGGAGGCGCCGCCAAGCCTCCCCTACCGCCACCTGCCGCAGCATCTCGCCGGCCTCCTC AAGACCCGGCCGCTCCACGACCTACTCTCCGACGCGTCCACCTCCCGCGCCGCACGCCAC CTGTTCGACGCTGTGCCGCGCCCGACCCCCGCCCTCTGCGGCACGCTCATCTCCGCTCTC TCAAGGCTCTGCTCGCACCAGGAGCTTCTCGACGCCTTCTCATCGCTTCACCGCAGGGGC TCCGACGTCCCGCCCGGCTGTGTGCCCCTCGTTGTGAAGTCGTGCGCGATCTTGGCCGCG TCACGTCAGGGAAAGCAGGTGCACTGTCACGCCATTGTCCGTGGTCTCCTTGGGGATATC TTTGTGCAGACTGCTCTGGTGGATTTCTATGCAAAGAACGGGGACATGGATTGTGCTGTG AAGGTGTTTGACGAGATGCCGGTGAAGGACCCGATACCGATGAACTGCTTGATCACTGGG TATTCCAAGTCCGGTGATGTGGTGAAGGCGAGGAGGCTATTTGATGGCATGGTAAGAAGG ACATCTGCATCCTGGAATTCAATGATCGCCTGTTATGCGCATGGTGGGGAATACCAGGAA GCTTTGAGGTTGTTCCGTAGGATGTTGAGTGAGGGTGCAAGGCCAAATGCGATCACTATT GCGACGATGTTTTCCATTTGTGCCAAGACTGGTGATCTTGAAACAGGAAAGTGGGCAAGG TCTTTGATCGCAGAGCAGGATTTGCAGAACATGATAGTGCACACTGCCTTGATGGAAATG TATGTCAAGTGTCGGGCTATTGACGAGGCACGCCGTGAGTTTGATCGGATGCAGCAGAGA GATGTCGTGGCATGGAGCACTATGATCGCTGGTTATGCACAGAATGGGAGGCCACATGAA TCTCTAGAGCTGTTTGAGAGGATGAAGGCAACCAGTTGCAAGCCAAATGAGGTGACTCTT GTTGGTGTACTATCTGCCTGTGCTCAGCTGGGCTCTGATGAATTAGGAGGACAGATTGGT AGCCATGTCGAGAGCCAGAACCTACCACTCACCAGCTACCTCGGATCCGCACTAATTGAC ATGTACACAAAGTGTGGGCACGTTGGCAGAGCTCGCAGTGTCTTCAACCGGATGGAACAC AAGGTTGTCATAACCTGGAACTCCATGATGAGAGGCCTAGCACTGAATGGCTTTGCGCAA GATGCAATCACCTTGTACAAAGAGATGACAGAGGAGGACGTCCAGCCAAACGAGATTACT TTCGTTGCGCTGTTAACGGCGTGCACCCATGCTGGATTGGTAGACCAAGGTATGTCCTTT TTCAAAGAGATGAAGACAATTCACCATGTTTCCCCTCAAGTGGAGCACTGCGCGTGCATA GTGGACCTCCTCTGCAAATCTGGAAGGCTGCGGGAAGCGTACAAGTTCATCTGCGACATG GAGGTCGAACCAAACGCGGTGATCTGGAGCACGCTGCTGAGCGCCTGCAGGGCTCACGCC GACGTCGAGCTGGCCAAGCTCGCCGCGAGCAAGCTCCTGGTTCTTGAGCCGGACAACTCC TCCATCTATGTCCTGCTGTCCAACATCTACGCGGATGCCGGCCTCTGGGGCGACGTGAGG GAGATCAGGGACCTGATGAGGAGCAAGAACGTGCAGAAGCTGTCTGCTTATAGTTGGATA GAGCTGGACGGTGAAGTGCACAAGTTCCTGGTGCAGGATACGTACCACCCGAAATCAGCT GAGATTTTCAACGTCGTCGACGGCATGGGGTTGCATCTGGACGACGTTGATTCTGACCCC GATTTATTTGTTCTAGAGCACTATTGA

Peptide Sequence

PEP ID	Os01t0715900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:29786136:29788237:-1 gene:Os01g0715900 transcript:Os01t0715900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0715900-01)
Sequence	MEAPPSLPYRHLPQHLAGLLKTRPLHDLLSDASTSRAARHLFDAVPRPTPALCGTLISAL SRLCSHQELLDAFSSLHRRGSDVPPGCVPLVVKSCAILAASRQGKQVHCHAIVRGLLGDI FVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRR TSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWAR SLIAEQDLQNMIVHTALMEMYVKCRAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHE SLELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALID MYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEIT FVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDM EVEPNAVIWSTLLSACRAHADVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVR EIRDLMRSKNVQKLSAYSWIELDGEVHKFLVQDTYHPKSAEIFNVVDGMGLHLDDVDSDP DLFVLEHY

Transcript Sequence

Transcript ID	Os01t0715900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:29786136:29788237:-1 gene:Os01g0715900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0715900-01)
Sequence	TGTGAGTCGAGGCCGCACTTTGGCGCCCGCGGCAGAGCCCGCGACATGCCTTGCCGCACC GCGCCGAGGCGTCCAAACACACGCTCCGCCCAGCCCAGAGAGCCCACTCCCGCCGCCGCG CGTCCCATCCAAACCTCCCTCCGCCTCCGCGTCCCGCCGGCCGCCGCCAATGGAGGCGCC GCCAAGCCTCCCCTACCGCCACCTGCCGCAGCATCTCGCCGGCCTCCTCAAGACCCGGCC GCTCCACGACCTACTCTCCGACGCGTCCACCTCCCGCGCCGCACGCCACCTGTTCGACGC TGTGCCGCGCCCGACCCCCGCCCTCTGCGGCACGCTCATCTCCGCTCTCTCAAGGCTCTG CTCGCACCAGGAGCTTCTCGACGCCTTCTCATCGCTTCACCGCAGGGGCTCCGACGTCCC GCCCGGCTGTGTGCCCCTCGTTGTGAAGTCGTGCGCGATCTTGGCCGCGTCACGTCAGGG AAAGCAGGTGCACTGTCACGCCATTGTCCGTGGTCTCCTTGGGGATATCTTTGTGCAGAC TGCTCTGGTGGATTTCTATGCAAAGAACGGGGACATGGATTGTGCTGTGAAGGTGTTTGA CGAGATGCCGGTGAAGGACCCGATACCGATGAACTGCTTGATCACTGGGTATTCCAAGTC CGGTGATGTGGTGAAGGCGAGGAGGCTATTTGATGGCATGGTAAGAAGGACATCTGCATC CTGGAATTCAATGATCGCCTGTTATGCGCATGGTGGGGAATACCAGGAAGCTTTGAGGTT GTTCCGTAGGATGTTGAGTGAGGGTGCAAGGCCAAATGCGATCACTATTGCGACGATGTT TTCCATTTGTGCCAAGACTGGTGATCTTGAAACAGGAAAGTGGGCAAGGTCTTTGATCGC AGAGCAGGATTTGCAGAACATGATAGTGCACACTGCCTTGATGGAAATGTATGTCAAGTG TCGGGCTATTGACGAGGCACGCCGTGAGTTTGATCGGATGCAGCAGAGAGATGTCGTGGC ATGGAGCACTATGATCGCTGGTTATGCACAGAATGGGAGGCCACATGAATCTCTAGAGCT GTTTGAGAGGATGAAGGCAACCAGTTGCAAGCCAAATGAGGTGACTCTTGTTGGTGTACT ATCTGCCTGTGCTCAGCTGGGCTCTGATGAATTAGGAGGACAGATTGGTAGCCATGTCGA GAGCCAGAACCTACCACTCACCAGCTACCTCGGATCCGCACTAATTGACATGTACACAAA GTGTGGGCACGTTGGCAGAGCTCGCAGTGTCTTCAACCGGATGGAACACAAGGTTGTCAT AACCTGGAACTCCATGATGAGAGGCCTAGCACTGAATGGCTTTGCGCAAGATGCAATCAC CTTGTACAAAGAGATGACAGAGGAGGACGTCCAGCCAAACGAGATTACTTTCGTTGCGCT GTTAACGGCGTGCACCCATGCTGGATTGGTAGACCAAGGTATGTCCTTTTTCAAAGAGAT GAAGACAATTCACCATGTTTCCCCTCAAGTGGAGCACTGCGCGTGCATAGTGGACCTCCT CTGCAAATCTGGAAGGCTGCGGGAAGCGTACAAGTTCATCTGCGACATGGAGGTCGAACC AAACGCGGTGATCTGGAGCACGCTGCTGAGCGCCTGCAGGGCTCACGCCGACGTCGAGCT GGCCAAGCTCGCCGCGAGCAAGCTCCTGGTTCTTGAGCCGGACAACTCCTCCATCTATGT CCTGCTGTCCAACATCTACGCGGATGCCGGCCTCTGGGGCGACGTGAGGGAGATCAGGGA CCTGATGAGGAGCAAGAACGTGCAGAAGCTGTCTGCTTATAGTTGGATAGAGCTGGACGG TGAAGTGCACAAGTTCCTGGTGCAGGATACGTACCACCCGAAATCAGCTGAGATTTTCAA CGTCGTCGACGGCATGGGGTTGCATCTGGACGACGTTGATTCTGACCCCGATTTATTTGT TCTAGAGCACTATTGAACATTTGAACATGCTAACAAACAATTGCAGCAGGGCATCCTTCG TTCACTGCAGATTGATTGTACTTTGCATAATTTATATACATGCATGATCCATCGATTCGA TT