Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0715700-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:29781295:29783199:1 gene:Os01g0715700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0715700-00)
Sequence	ATGCGACCGCTCCGCGACCCGGCGAAGCTGGCAGCGGCGGCCTCCTCGCAGCGGCACCTC CGCGAGATCCACGCGCACCTCCTCGTCTCGGGCCGCATCGCGTCCCCGTCCCACCTGGCC GCTTTCCTCGCCTCCCTCGCCTCCTCCTCCTCCGACGACGACGACGATGGCGACCTCTCC TACGCGCGCCTCCTCCTGCCGCGGCGCCCCGCCACGCTCCTCGCGCACAACTCCCTCCTC CGCGCCCTCGCTCGCGGCCGGCGCCCGCACCTCGCCTTCGGCGCGTTCCGCGACCTGCCG CTCGCGCCCGACAACTACTCCTTCACCTTCCTCGTCCGCGCCGCGACCGCCCTGGCCGCC GCCGCGGCGTCCGCGCTGGACGCGGCCCTGATCGCGGGGAGCGTGCACGCGTCGGCGCTC CGCCACGGACACGCGGGCGACCCGCACGTGCAGAGCGGGGCCGTCTCCATGTACGCCGCG GCCGGGGATGTGGGTGCCGCGCGGGCCGCGTTCGCGGAGATCGCGAGCCCGGACGTGGTG TGCGTCACCGCGATGGTGGGGGCTCTCGCCACTGGCGGCGAAGCGGACGCTGCGCGCGAG CTGTTTGACGGAATGCCTCAGAGGGACCATGTCGCGTGGAACGCCATGATCGCCGGGTAT GTGCACACGGGCCGGTCAAGGGAGGCCTTGAGGCTGTTCGACGAAATGCGTCATGCTGGC GCTGCCGTGGGGGAGGTGACGCTGGTGTCAGCGCTCACTGCCTGTGCGCAATTGGGCGCG CTGGAACGAGGCAAGTGGGTGCACTCGTGTGCACATAGCCGTGGGATGCGGCTGTCGGTC ACGCTCGGCACCGCGTTGATTGATATGTATTCCAAGTGTGGCGCGGTGGCGGCAGCCATG GAGGTGTTTGACAGCATGGGCGAAAGGAACGTTTACACTTGGACCAGTGCAGTGAGTGGC CTTGCGATGAATGGCATGGGGAGAGACTGCCTTGCGCTGTTCAAGCGCATGGAGAGCACA GGGGTTGAGCCTAACGGTGTCACCTTTGTCGTGGTCCTCCGTGGATGCTCCATGGCTGGG TTGGTAGATGAGGGACGAGCATGCTTCGATTCGATGAAGAGCAATCATGGAATTGATCCT TGGCTTGAACACTACGGTTGCATGGTTGATTTGTATGGTCGAGCTGGGCGTCTGGATGAT GCCGTGAACTTCATCAATGGCATGCCATTGGAGCCACACGAAGGCGTGTGGGGAGCACTA CTCAATGCGTCACGGATCCACAAAAACGTTGAACTGGGGAAATATGCAATGGATAAGCTC ATGGCGATCGAGTCCAAGAATGATGCCGCCCATGTCCTGCTCTCTAACATCTATGCAGAC TCGCAGAACTGGAAGGGTGTCAGCAATGTTCGGAACATGATGAAGGCCAAGGGAGTGAAA AAGGTGCCTGGGTGTAGTGCCATTGAGGTTGGTGGCAAGGTGCATGAGTTCTTTGTTGGA GGCAAGACACACCCAAGACACAAGGAGATCGAGATGATGCTTGCAGAGATGAATCAGAGG CTGAGGCTGCAAGGGTACATTGCGAACACAAAAGAGGTGTTGTTTGATATCGAGGAAGAG GACAAAGAAGATGCAATCTCCTTGCATAGTGAGAAGCTGGCCATTGCATTTGGCCTAGTC GCGTTGCCGGAAGACATGGAGATTAGGATAGTGAAGAACCTGAGAGTATGTGAGGACTGC CATGATTATACCAAGATGATATCCAAGGTCTTCAACAGGGAGATTGTTATGAGAGATAGG AATAGGTTTCACCATTTCAAGGATGGAGCATGCTCCTGTAAGGATTACTGGTGA

Peptide Sequence

PEP ID	Os01t0715700-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:29781295:29783199:1 gene:Os01g0715700 transcript:Os01t0715700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0715700-00)
Sequence	MRPLRDPAKLAAAASSQRHLREIHAHLLVSGRIASPSHLAAFLASLASSSSDDDDDGDLS YARLLLPRRPATLLAHNSLLRALARGRRPHLAFGAFRDLPLAPDNYSFTFLVRAATALAA AAASALDAALIAGSVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVV CVTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAG AAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAM EVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAG LVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGAL LNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVK KVPGCSAIEVGGKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIEEE DKEDAISLHSEKLAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIVMRDR NRFHHFKDGACSCKDYW

Transcript Sequence

Transcript ID	Os01t0715700-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:29781295:29783199:1 gene:Os01g0715700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0715700-00)
Sequence	ATGCGACCGCTCCGCGACCCGGCGAAGCTGGCAGCGGCGGCCTCCTCGCAGCGGCACCTC CGCGAGATCCACGCGCACCTCCTCGTCTCGGGCCGCATCGCGTCCCCGTCCCACCTGGCC GCTTTCCTCGCCTCCCTCGCCTCCTCCTCCTCCGACGACGACGACGATGGCGACCTCTCC TACGCGCGCCTCCTCCTGCCGCGGCGCCCCGCCACGCTCCTCGCGCACAACTCCCTCCTC CGCGCCCTCGCTCGCGGCCGGCGCCCGCACCTCGCCTTCGGCGCGTTCCGCGACCTGCCG CTCGCGCCCGACAACTACTCCTTCACCTTCCTCGTCCGCGCCGCGACCGCCCTGGCCGCC GCCGCGGCGTCCGCGCTGGACGCGGCCCTGATCGCGGGGAGCGTGCACGCGTCGGCGCTC CGCCACGGACACGCGGGCGACCCGCACGTGCAGAGCGGGGCCGTCTCCATGTACGCCGCG GCCGGGGATGTGGGTGCCGCGCGGGCCGCGTTCGCGGAGATCGCGAGCCCGGACGTGGTG TGCGTCACCGCGATGGTGGGGGCTCTCGCCACTGGCGGCGAAGCGGACGCTGCGCGCGAG CTGTTTGACGGAATGCCTCAGAGGGACCATGTCGCGTGGAACGCCATGATCGCCGGGTAT GTGCACACGGGCCGGTCAAGGGAGGCCTTGAGGCTGTTCGACGAAATGCGTCATGCTGGC GCTGCCGTGGGGGAGGTGACGCTGGTGTCAGCGCTCACTGCCTGTGCGCAATTGGGCGCG CTGGAACGAGGCAAGTGGGTGCACTCGTGTGCACATAGCCGTGGGATGCGGCTGTCGGTC ACGCTCGGCACCGCGTTGATTGATATGTATTCCAAGTGTGGCGCGGTGGCGGCAGCCATG GAGGTGTTTGACAGCATGGGCGAAAGGAACGTTTACACTTGGACCAGTGCAGTGAGTGGC CTTGCGATGAATGGCATGGGGAGAGACTGCCTTGCGCTGTTCAAGCGCATGGAGAGCACA GGGGTTGAGCCTAACGGTGTCACCTTTGTCGTGGTCCTCCGTGGATGCTCCATGGCTGGG TTGGTAGATGAGGGACGAGCATGCTTCGATTCGATGAAGAGCAATCATGGAATTGATCCT TGGCTTGAACACTACGGTTGCATGGTTGATTTGTATGGTCGAGCTGGGCGTCTGGATGAT GCCGTGAACTTCATCAATGGCATGCCATTGGAGCCACACGAAGGCGTGTGGGGAGCACTA CTCAATGCGTCACGGATCCACAAAAACGTTGAACTGGGGAAATATGCAATGGATAAGCTC ATGGCGATCGAGTCCAAGAATGATGCCGCCCATGTCCTGCTCTCTAACATCTATGCAGAC TCGCAGAACTGGAAGGGTGTCAGCAATGTTCGGAACATGATGAAGGCCAAGGGAGTGAAA AAGGTGCCTGGGTGTAGTGCCATTGAGGTTGGTGGCAAGGTGCATGAGTTCTTTGTTGGA GGCAAGACACACCCAAGACACAAGGAGATCGAGATGATGCTTGCAGAGATGAATCAGAGG CTGAGGCTGCAAGGGTACATTGCGAACACAAAAGAGGTGTTGTTTGATATCGAGGAAGAG GACAAAGAAGATGCAATCTCCTTGCATAGTGAGAAGCTGGCCATTGCATTTGGCCTAGTC GCGTTGCCGGAAGACATGGAGATTAGGATAGTGAAGAACCTGAGAGTATGTGAGGACTGC CATGATTATACCAAGATGATATCCAAGGTCTTCAACAGGGAGATTGTTATGAGAGATAGG AATAGGTTTCACCATTTCAAGGATGGAGCATGCTCCTGTAAGGATTACTGGTGATCAATT TTGATGCTATTCTAGCGCATCCATTCTAACATATAAATGCGCGAG