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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0715500-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:29770480:29772931:-1 gene:Os01g0715500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:voltage-dependent anion channel 4, voltage-dependent anion-selective channel 4 description:Similar to voltage-dependent anion channel protein2. (Os01t0715500-00)
Sequence

AAGCTACTTCCGATTCTCAGGCAAGTGTTAACTACAATCACAACTGAAGACCTTGGTGTA
TCAGGCTTGAAGCAAATCGTATCACTTCCTTTTCCATACCAGACAGCTGGGAAGGCTGAA
CTCCAGTACCTGCATGACTACGCTGGTATCAGCCTCGGTGTTGGCCTGACCTCAAAGCCT
TTGGTTAACCTTTCTGGTGTGTTCGGCAACAAATCTGTTGCTGTCGGTGCTGATGTTGCA
GTTGATACTTCTACTGGGGACTTCACCAAGTACGATGCTGGACTGACCATCAACAATTCA
GATCTTGCTGCTGATCTGACGCTGAACAACAAAGGGGACAGCCTCACTGCGTCCTACTAC
CATCTGGTGAACAAAGAGTCAGGTACGGCTGCTGGAGCGGAGCTGACCCACAGCTTCTCG
ACCAAGGAGAACACCCTCAGCTTCGGGATGCAGCACGCCCTGGACCCTCTCACTACCGTG
AAGGCGCGCTACAACAACCACGGCATGGTCAGCGCCCTCATCCAGCACGAGTGGAGACCC
AAGTCTTTCTTAACGCTCTCCGCCGAGGTCGACACCAAGGCGATCGACAAGGCCTCCAAG
GTTGGACTGTCGCTGGTTCTCAAGCCCTGA

Peptide Sequence

PEP ID

Os01t0715500-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:29770480:29772931:-1 gene:Os01g0715500 transcript:Os01t0715500-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:voltage-dependent anion channel 4, voltage-dependent anion-selective channel 4 description:Similar to voltage-dependent anion channel protein2. (Os01t0715500-00)
Sequence

KLLPILRQVLTTITTEDLGVSGLKQIVSLPFPYQTAGKAELQYLHDYAGISLGVGLTSKP
LVNLSGVFGNKSVAVGADVAVDTSTGDFTKYDAGLTINNSDLAADLTLNNKGDSLTASYY
HLVNKESGTAAGAELTHSFSTKENTLSFGMQHALDPLTTVKARYNNHGMVSALIQHEWRP
KSFLTLSAEVDTKAIDKASKVGLSLVLKP

Transcript Sequence

Transcript ID

Os01t0715500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:29770480:29772931:-1 gene:Os01g0715500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:voltage-dependent anion channel 4, voltage-dependent anion-selective channel 4 description:Similar to voltage-dependent anion channel protein2. (Os01t0715500-00)
Sequence

AGATCTTCTGTACAAGGACTTCCACACGGACCAGAAGTTTACCCTGACCACCTACACCAA
CAATGGAGTTGTAATCACTGCTGCAAGCACAATGAAAGATGAAGCTATCTTTAGCGAGAT
CCAGACCAAGCTGAAGAGCAATAATGTGATGCTGGATGTGAAAGCTACTTCCGATTCTCA
GGCAAGTGTTAACTACAATCACAACTGAAGACCTTGGTGTATCAGGCTTGAAGCAAATCG
TATCACTTCCTTTTCCATACCAGACAGCTGGGAAGGCTGAACTCCAGTACCTGCATGACT
ACGCTGGTATCAGCCTCGGTGTTGGCCTGACCTCAAAGCCTTTGGTTAACCTTTCTGGTG
TGTTCGGCAACAAATCTGTTGCTGTCGGTGCTGATGTTGCAGTTGATACTTCTACTGGGG
ACTTCACCAAGTACGATGCTGGACTGACCATCAACAATTCAGATCTTGCTGCTGATCTGA
CGCTGAACAACAAAGGGGACAGCCTCACTGCGTCCTACTACCATCTGGTGAACAAAGAGT
CAGGTACGGCTGCTGGAGCGGAGCTGACCCACAGCTTCTCGACCAAGGAGAACACCCTCA
GCTTCGGGATGCAGCACGCCCTGGACCCTCTCACTACCGTGAAGGCGCGCTACAACAACC
ACGGCATGGTCAGCGCCCTCATCCAGCACGAGTGGAGACCCAAGTCTTTCTTAACGCTCT
CCGCCGAGGTCGACACCAAGGCGATCGACAAGGCCTCCAAGGTTGGACTGTCGCTGGTTC
TCAAGCCCTGAT