Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0713600-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:29638075:29642862:1 gene:Os01g0713600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATE-FLOWERING 1 description:Transcriptional factor B3 family protein. (Os01t0713600-01)
Sequence

ATGGCCGGGGTCACCAGCAAGCGCCGATCCTCCTCCGCCTCCACCTCCTCCTCCTCCGGC
GACGGCGCCGCCGTCTCCGACCGGCCGCGGGGGGTGACCCGGAAGCGCAGGTCCGGCGGC
CGTTGCCCCCGCCCCGCCGCCTCCCTGAGGCCGGCCGCGCCCCGACCCTCCTCTCACCAC
ACTGCTGGATTGAGAGTAATTCTGCAAAAGGAACTACGGTACAGCGACGTAAGCCAGCTA
GGGAGAATTGTTCTCCCGAAGAAAGAGGCAGAGGCTTACCTACCAATTCTGACATCAAAG
GATGGCAAGAAAAGTTTATGTATGCATGATTTGCAAAATGCACAACTCTGGACCTTCAAG
TACAGGTATTGGCCCAACAACAAGAGCAGGATGTATGTACTTGAGAATACCGGGGATTAT
GTCAGAACCCATGATCTTCAACTAGGAGACTCCATTGTGATATACAAAGATGATGAGAAT
AACCGATTTGTCATCGGAGCAAAGAAGGCAGGTGATCAACAAGCTGCCACTGTGCCACAA
GTTGACGAGCATATCTCTACCCTCTTCCCCATTTTTCCAATTGCACAAGTCGATGACTAT
CTCTCTCCCATGGCACCACAAGTTGATATCTCTGCCTTCGTGCCACATGCTGATGAGAAC
CATGAGATATTTGACGGGATACTGAATTCTCTGCCAGAGATACCAGTAGCCAATGTGAGG
TATTCTGACTTCTTCGACCCATTCGATGATGGTATGGACATGGCAAACACTCTGAACGCC
AACGCCAACCAGTCTGCTAGTCTGCATGTCACTGATGATAAGTCTGGGCATTCCTTGATT
CCCAACCCAAAGTCTGGGCCTCACATGTGA

Peptide Sequence

PEP ID

Os01t0713600-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:29638075:29642862:1 gene:Os01g0713600 transcript:Os01t0713600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATE-FLOWERING 1 description:Transcriptional factor B3 family protein. (Os01t0713600-01)
Sequence

MAGVTSKRRSSSASTSSSSGDGAAVSDRPRGVTRKRRSGGRCPRPAASLRPAAPRPSSHH
TAGLRVILQKELRYSDVSQLGRIVLPKKEAEAYLPILTSKDGKKSLCMHDLQNAQLWTFK
YRYWPNNKSRMYVLENTGDYVRTHDLQLGDSIVIYKDDENNRFVIGAKKAGDQQAATVPQ
VDEHISTLFPIFPIAQVDDYLSPMAPQVDISAFVPHADENHEIFDGILNSLPEIPVANVR
YSDFFDPFDDGMDMANTLNANANQSASLHVTDDKSGHSLIPNPKSGPHM

Transcript Sequence

Transcript ID

Os01t0713600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:29638075:29642862:1 gene:Os01g0713600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LATE-FLOWERING 1 description:Transcriptional factor B3 family protein. (Os01t0713600-01)
Sequence

AGCCGCCTCCGCCGCCGCAGCGTCCTCGCCTCCTCCTCCTCCTCCTCCTCCAATTCCTCC
TCTTCCTCCCTCCACCTCGACCTCCGCCGCCCGTCCCACCGACATGGCCGGGGTCACCAG
CAAGCGCCGATCCTCCTCCGCCTCCACCTCCTCCTCCTCCGGCGACGGCGCCGCCGTCTC
CGACCGGCCGCGGGGGGTGACCCGGAAGCGCAGGTCCGGCGGCCGTTGCCCCCGCCCCGC
CGCCTCCCTGAGGCCGGCCGCGCCCCGACCCTCCTCTCACCACACTGCTGGATTGAGAGT
AATTCTGCAAAAGGAACTACGGTACAGCGACGTAAGCCAGCTAGGGAGAATTGTTCTCCC
GAAGAAAGAGGCAGAGGCTTACCTACCAATTCTGACATCAAAGGATGGCAAGAAAAGTTT
ATGTATGCATGATTTGCAAAATGCACAACTCTGGACCTTCAAGTACAGGTATTGGCCCAA
CAACAAGAGCAGGATGTATGTACTTGAGAATACCGGGGATTATGTCAGAACCCATGATCT
TCAACTAGGAGACTCCATTGTGATATACAAAGATGATGAGAATAACCGATTTGTCATCGG
AGCAAAGAAGGCAGGTGATCAACAAGCTGCCACTGTGCCACAAGTTGACGAGCATATCTC
TACCCTCTTCCCCATTTTTCCAATTGCACAAGTCGATGACTATCTCTCTCCCATGGCACC
ACAAGTTGATATCTCTGCCTTCGTGCCACATGCTGATGAGAACCATGAGATATTTGACGG
GATACTGAATTCTCTGCCAGAGATACCAGTAGCCAATGTGAGGTATTCTGACTTCTTCGA
CCCATTCGATGATGGTATGGACATGGCAAACACTCTGAACGCCAACGCCAACCAGTCTGC
TAGTCTGCATGTCACTGATGATAAGTCTGGGCATTCCTTGATTCCCAACCCAAAGTCTGG
GCCTCACATGTGAGACTGACAGGGAAGTGGTATTTCATACCATGGTCAGTTTGTATGAAG
CTCAGAAACCCCTTCCCTGGCGCCATTGTTGTACATCCAAATAATTGGTGTCCTTATTTT
GACGCTGTATATGCTAACTGCTACATGCAGTTTTATGTGTAAAATATTTTGTTCACAACC
CAACTGGAGGTTTAATCAGATGAAACATTGTAACTC