Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0712800-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:29610944:29612232:1 gene:Os01g0712800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0712800-00)
Sequence	ATGCGACGGCCTGATCCGGCGACTGGCTTGCGCTTTGCGGCCGTCTCGCTGATCCTGTGC ACGGCCAACATCTGTGCGGTGGCCAGACGGTCGTCGTACGCGCTCCTGCTCGACGACGAG GAGGACGGCGGCGGAGGCGGTGACGGCTCGGCGTCCTTCTCCTTCTTCCCGCAGACGCAG CCGCGCGGGCTGGTGTACGGGTTCTACGACGAGAGTTGCCCCGACGCCGAGGGGATCGTG TCGTCCACCGTGCGGGAGCTCTACCTCGCCAACCCCAACGTCGCCGCCGCGCTCGTCCGC CTCTTCTTCCACGACTGCTTCATCCACGGCTGCGACGCCTCGGTGCTCCTGGACCGCATC AACGGCGACAAGTCGGAGAGGGAAGCGGCCCCGAACCAGTCGCTGAGAGGCTTCGGCGCC GTCGACAAGATCAAGGCGAGGCTGGAGGCGGCGTGCCCGCGGACCGTCTCCTGCGCCGAC ATCCTGGTCCTCGCCGCGCGGGACAGCCTCGTCCTAGCGGGCGGGCCGAGCTATCCCGTG CTCACCGGACGCAGCGACAGCGCCAGGGCCTTCTACGACGAGGTGGGCGCGCGCATCCCG TCGCCGAACGCCACCTACACCGTGACGCTCGATGCGTTCGCCCGCCGCGGCTTCACCGAG CGCGAGACCGTCGCGCTCTTAGGAGCACATAGCATCGGGAAGGTGCATTGCAGATTCTTC AAGGACAGGATCGACAACTTCGCCGGGACAGGCGAGCCTGACGACACCATCGACGCCGAC ATGGTCGAAGAGATGCGCGCGGTGTGCGACGGCGACGGCGCCGCGCCGATGGAGATGGGG TACTACCGGCAGGGGAGGGAGGTGGGTTTCGGCGCGCACTACTACGCGAAGCTTCTCGGT GGACGGGGCATCCTGCGGTCGGACCAGCAGCTCACGGCGGGGAGTACCGTGCGGTGGGTG CGCGTGTACGCGGCCGGGGAGCGCGGCGAGGAGGTGTTCCGCGAGGACTTCGCGCACGCA ATGGTTAAGCTTGCCGCGCTTGAGCCGCTCACCGGGTCGCCCGGCCACGTCCGGATCCGC TGCTCCAAACCCGTGGAGTAG

Peptide Sequence

PEP ID	Os01t0712800-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:29610944:29612232:1 gene:Os01g0712800 transcript:Os01t0712800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0712800-00)
Sequence	MRRPDPATGLRFAAVSLILCTANICAVARRSSYALLLDDEEDGGGGGDGSASFSFFPQTQ PRGLVYGFYDESCPDAEGIVSSTVRELYLANPNVAAALVRLFFHDCFIHGCDASVLLDRI NGDKSEREAAPNQSLRGFGAVDKIKARLEAACPRTVSCADILVLAARDSLVLAGGPSYPV LTGRSDSARAFYDEVGARIPSPNATYTVTLDAFARRGFTERETVALLGAHSIGKVHCRFF KDRIDNFAGTGEPDDTIDADMVEEMRAVCDGDGAAPMEMGYYRQGREVGFGAHYYAKLLG GRGILRSDQQLTAGSTVRWVRVYAAGERGEEVFREDFAHAMVKLAALEPLTGSPGHVRIR CSKPVE

Transcript Sequence

Transcript ID	Os01t0712800-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:29610944:29612232:1 gene:Os01g0712800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os01t0712800-00)
Sequence	ATGCGACGGCCTGATCCGGCGACTGGCTTGCGCTTTGCGGCCGTCTCGCTGATCCTGTGC ACGGCCAACATCTGTGCGGTGGCCAGACGGTCGTCGTACGCGCTCCTGCTCGACGACGAG GAGGACGGCGGCGGAGGCGGTGACGGCTCGGCGTCCTTCTCCTTCTTCCCGCAGACGCAG CCGCGCGGGCTGGTGTACGGGTTCTACGACGAGAGTTGCCCCGACGCCGAGGGGATCGTG TCGTCCACCGTGCGGGAGCTCTACCTCGCCAACCCCAACGTCGCCGCCGCGCTCGTCCGC CTCTTCTTCCACGACTGCTTCATCCACGGCTGCGACGCCTCGGTGCTCCTGGACCGCATC AACGGCGACAAGTCGGAGAGGGAAGCGGCCCCGAACCAGTCGCTGAGAGGCTTCGGCGCC GTCGACAAGATCAAGGCGAGGCTGGAGGCGGCGTGCCCGCGGACCGTCTCCTGCGCCGAC ATCCTGGTCCTCGCCGCGCGGGACAGCCTCGTCCTAGCGGGCGGGCCGAGCTATCCCGTG CTCACCGGACGCAGCGACAGCGCCAGGGCCTTCTACGACGAGGTGGGCGCGCGCATCCCG TCGCCGAACGCCACCTACACCGTGACGCTCGATGCGTTCGCCCGCCGCGGCTTCACCGAG CGCGAGACCGTCGCGCTCTTAGGAGCACATAGCATCGGGAAGGTGCATTGCAGATTCTTC AAGGACAGGATCGACAACTTCGCCGGGACAGGCGAGCCTGACGACACCATCGACGCCGAC ATGGTCGAAGAGATGCGCGCGGTGTGCGACGGCGACGGCGCCGCGCCGATGGAGATGGGG TACTACCGGCAGGGGAGGGAGGTGGGTTTCGGCGCGCACTACTACGCGAAGCTTCTCGGT GGACGGGGCATCCTGCGGTCGGACCAGCAGCTCACGGCGGGGAGTACCGTGCGGTGGGTG CGCGTGTACGCGGCCGGGGAGCGCGGCGAGGAGGTGTTCCGCGAGGACTTCGCGCACGCA ATGGTTAAGCTTGCCGCGCTTGAGCCGCTCACCGGGTCGCCCGGCCACGTCCGGATCCGC TGCTCCAAACCCGTGGAGTAG