Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0711800-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:29580715:29583046:-1 gene:Os01g0711800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nucleosome assembly protein 1-like protein 3, Nucleosome assembly protein 1;3 description:Nucleosome assembly protein (NAP) family protein. (Os01t0711800-00)
Sequence

GAGCTCTTGTCAGAGGAAAAGGCCATCCTCGTGGAGACGCTGAAGAACAAGCTGCAGGCG
TTGGCGGAGCAACATGTTGACGTGCTCGAAAGCCTGGCGCCCGTGGTCAGGAAGCGCGTC
GATGTGCTCATAGAGATTCAGAGCCAACATGATGAACTAGAAGCGAAGTTCTTGGAGGAA
AAAGCTGCTCTAGAAGCTAATTATCAGAAGCTTTATGGACCATTGTACTCAAAGCGTTCT
GAAATTGTGAGTGGTGTTCTTGAAGTAGAGGGCGAGACTGAAGAAAGAGAGGAAAAGGGT
GTTCCAGATTTCTGGCTCAAAGCAATGAAGAACAATGAGATTCTTGCTGAGGAGATCCAT
GAGAGCGATGAGGAAGCTCTGAAGTACCTTAAGGACATCAAATGGTGCAGAATTGATGAT
CCAAAGGGTTTTAAGTTCGAATTCTTTTTCGATACAAATCCCTTCTTTAAAAATCAAGTG
CTGACTAAAACATACCACATGATTGATGAAGATGATGAACCCATCCTAGAGAAAGCAATT
GGGACTGAAATCGAATGGCATCCAGGAAATTGTTTGACACAGGAGGTGCTAACAAAAGAG
AGTTCAGAGAGCACTAAACCTATAACAAAGACTGAAGAATATGAGAGCTTCTTTAACTTC
TTCAGCCCCCCTCAAGTTCCAGAGGATGATGCAAAAATTGACGAAAATACCGCTGAAGAA
TTGCAGAACCAAATGGAACGAGATTATGACATTGCATCTACTCTCAGGGACAAGATTATA
CCACATGTTGTTTCTTGGTTCACTGGAGAGGCTGTTCAAGACGAGGATTATGGTGCTTCT
TGGGTGGATGATGAAGAGGATGATGACGATGAATATAGTGATGAAGAAGCATAG

Peptide Sequence

PEP ID

Os01t0711800-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:29580715:29583046:-1 gene:Os01g0711800 transcript:Os01t0711800-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nucleosome assembly protein 1-like protein 3, Nucleosome assembly protein 1;3 description:Nucleosome assembly protein (NAP) family protein. (Os01t0711800-00)
Sequence

ELLSEEKAILVETLKNKLQALAEQHVDVLESLAPVVRKRVDVLIEIQSQHDELEAKFLEE
KAALEANYQKLYGPLYSKRSEIVSGVLEVEGETEEREEKGVPDFWLKAMKNNEILAEEIH
ESDEEALKYLKDIKWCRIDDPKGFKFEFFFDTNPFFKNQVLTKTYHMIDEDDEPILEKAI
GTEIEWHPGNCLTQEVLTKESSESTKPITKTEEYESFFNFFSPPQVPEDDAKIDENTAEE
LQNQMERDYDIASTLRDKIIPHVVSWFTGEAVQDEDYGASWVDDEEDDDDEYSDEEA

Transcript Sequence

Transcript ID

Os01t0711800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:29580715:29583046:-1 gene:Os01g0711800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nucleosome assembly protein 1-like protein 3, Nucleosome assembly protein 1;3 description:Nucleosome assembly protein (NAP) family protein. (Os01t0711800-00)
Sequence

GAGCTCTTGTCAGAGGAAAAGGCCATCCTCGTGGAGACGCTGAAGAACAAGCTGCAGGCG
TTGGCGGAGCAACATGTTGACGTGCTCGAAAGCCTGGCGCCCGTGGTCAGGAAGCGCGTC
GATGTGCTCATAGAGATTCAGAGCCAACATGATGAACTAGAAGCGAAGTTCTTGGAGGAA
AAAGCTGCTCTAGAAGCTAATTATCAGAAGCTTTATGGACCATTGTACTCAAAGCGTTCT
GAAATTGTGAGTGGTGTTCTTGAAGTAGAGGGCGAGACTGAAGAAAGAGAGGAAAAGGGT
GTTCCAGATTTCTGGCTCAAAGCAATGAAGAACAATGAGATTCTTGCTGAGGAGATCCAT
GAGAGCGATGAGGAAGCTCTGAAGTACCTTAAGGACATCAAATGGTGCAGAATTGATGAT
CCAAAGGGTTTTAAGTTCGAATTCTTTTTCGATACAAATCCCTTCTTTAAAAATCAAGTG
CTGACTAAAACATACCACATGATTGATGAAGATGATGAACCCATCCTAGAGAAAGCAATT
GGGACTGAAATCGAATGGCATCCAGGAAATTGTTTGACACAGGAGGTGCTAACAAAAGAG
AGTTCAGAGAGCACTAAACCTATAACAAAGACTGAAGAATATGAGAGCTTCTTTAACTTC
TTCAGCCCCCCTCAAGTTCCAGAGGATGATGCAAAAATTGACGAAAATACCGCTGAAGAA
TTGCAGAACCAAATGGAACGAGATTATGACATTGCATCTACTCTCAGGGACAAGATTATA
CCACATGTTGTTTCTTGGTTCACTGGAGAGGCTGTTCAAGACGAGGATTATGGTGCTTCT
TGGGTGGATGATGAAGAGGATGATGACGATGAATATAGTGATGAAGAAGCATAG