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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0711600-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:29572656:29575622:1 gene:Os01g0711600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Reversion-To-ethylene Sensitivity1 homologue 1 description:Protein of unknown function DUF778 family protein. (Os01t0711600-01)
Sequence

ATGGCACCAAACAAAATTTCCTCAATGGATGCTGGAGCAGCTTTTGATGACGAAGATGCT
AGTTCCAGCAATTCACTGCAGGAGTTGTGGCCAGTTGGCGAGATAGATCCTAAGAGAGCA
AGATTTCCTTGTTGCATTGTTTGGACTCCTCTTCCTATTGTCTCGTGGCTTGCTCCTTAC
ATAGGGCATGCTGGAATCTGTCGAGAGGATGGGACTGTCTTGGATTTTGCTGGTTCAAAT
CTGGTGAGCATGGATAATTTTGCATATGGTTCTATTGCGAGATATCTCCAGCTTGACAGA
AAGAAGTGTTGCTTTCCTGTTAATCTCGCGACACATGTATGTGAGCGGTCCTACAAGCAT
GCAGAAGCAGGAACGGCGATTTCCTGGGACGACGCTCTGCAACTGGGCATGAGAAGTTTC
GGGCACAAGTTCTATAATCTGTTTACCTGCAATTGCTACTCATTTGTGGCAAACTGCTTG
AATCGGCTTGCCTACAATGGCTCCGTGAAGTGGAATGTGTTGAATGTGGCTGCTCTTGTT
TGGTTGCGTGGCCAATGGGTGGATAAAATGTCTGTTGTTCGTTCATTCTTTCCTTTTCTA
ACTGTGACATGCGTTGGCATTTTAATGGCTGGCTGGCCTTTCCTAATAGGGATGGCAGCC
TTCTCTTCTCTCTTGATTGGATGGTTTGTATTTGCTGTATACTGCATGAAGGATCTAGTG
TGCTGA

Peptide Sequence

PEP ID

Os01t0711600-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:29572656:29575622:1 gene:Os01g0711600 transcript:Os01t0711600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Reversion-To-ethylene Sensitivity1 homologue 1 description:Protein of unknown function DUF778 family protein. (Os01t0711600-01)
Sequence

MAPNKISSMDAGAAFDDEDASSSNSLQELWPVGEIDPKRARFPCCIVWTPLPIVSWLAPY
IGHAGICREDGTVLDFAGSNLVSMDNFAYGSIARYLQLDRKKCCFPVNLATHVCERSYKH
AEAGTAISWDDALQLGMRSFGHKFYNLFTCNCYSFVANCLNRLAYNGSVKWNVLNVAALV
WLRGQWVDKMSVVRSFFPFLTVTCVGILMAGWPFLIGMAAFSSLLIGWFVFAVYCMKDLV
C

Transcript Sequence

Transcript ID

Os01t0711600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:29572656:29575622:1 gene:Os01g0711600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Reversion-To-ethylene Sensitivity1 homologue 1 description:Protein of unknown function DUF778 family protein. (Os01t0711600-01)
Sequence

TGCGCTTACCATTTGCGCCGCCCATCGCGTCCAGCTAGCGCCTGGCGCGGCTGCAGATGC
AGCTGCTGAGCTGCAGGTGCATGCACCTTTCCCACCCCCACCTCCCTCTCTCCCCTTCGT
CTTCCTCTATAGCCCGCGCCGCGCCTCCCTGTCCCCGAGTCCGAAGCCCGAATCCGAAGC
GAAGTGACCGCAAGAGCTCACCCCCGAGTCCCCCCCTCGCCGGATCGCGCGGGCCGCCTA
CCTCCTCCCGTCGCACCAGCTACCGCGGGAATGCGAAGATCTTGCGATGGAAGCTAGTCA
AATCTGATTTCGTTTAAGTACAAGTAACAACAATGGCACCAAACAAAATTTCCTCAATGG
ATGCTGGAGCAGCTTTTGATGACGAAGATGCTAGTTCCAGCAATTCACTGCAGGAGTTGT
GGCCAGTTGGCGAGATAGATCCTAAGAGAGCAAGATTTCCTTGTTGCATTGTTTGGACTC
CTCTTCCTATTGTCTCGTGGCTTGCTCCTTACATAGGGCATGCTGGAATCTGTCGAGAGG
ATGGGACTGTCTTGGATTTTGCTGGTTCAAATCTGGTGAGCATGGATAATTTTGCATATG
GTTCTATTGCGAGATATCTCCAGCTTGACAGAAAGAAGTGTTGCTTTCCTGTTAATCTCG
CGACACATGTATGTGAGCGGTCCTACAAGCATGCAGAAGCAGGAACGGCGATTTCCTGGG
ACGACGCTCTGCAACTGGGCATGAGAAGTTTCGGGCACAAGTTCTATAATCTGTTTACCT
GCAATTGCTACTCATTTGTGGCAAACTGCTTGAATCGGCTTGCCTACAATGGCTCCGTGA
AGTGGAATGTGTTGAATGTGGCTGCTCTTGTTTGGTTGCGTGGCCAATGGGTGGATAAAA
TGTCTGTTGTTCGTTCATTCTTTCCTTTTCTAACTGTGACATGCGTTGGCATTTTAATGG
CTGGCTGGCCTTTCCTAATAGGGATGGCAGCCTTCTCTTCTCTCTTGATTGGATGGTTTG
TATTTGCTGTATACTGCATGAAGGATCTAGTGTGCTGACTCTTTTAAAGAACATTGGCAC
TGAATCCTGTGATGAATTATGG