Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0711000-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:29536726:29542409:1 gene:Os01g0711000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar ATP synthase subunit B isoform 2 (EC 3.6.3.14) (V-ATPase B subunit 2) (Vacuolar proton pump B subunit 2). (Os01t0711000-01)
Sequence	ATGGTTGTTGCAAATGGTAATGTCGACACGGAGGAAGGAACTCTTGAGATTGGGATGGAG TACAGGACAGTCTCTGGAGTTGCTGGTCCTCTAGTCATTCTTGATAAAGTGAAGGGTCCT AAATACCAAGAAATTGTCAATATACGATTAGGAGATGGCACAACTAGGCGTGGTCAAGTG CTTGAAGTCGATGGGGAGAAAGCTGTTGTTCAGGTTTTCGAAGGAACATCTGGTATTGAC AACAAATACACAACTGTACAATTCACCGGTGAGGTTCTAAAAACTCCAGTGTCACTGGAT ATGCTTGGACGTGTCTTCAATGGTTCTGGGAAACCTATAGATAATGGCCCACCGATTTTA CCAGAGGCTTACTTGGATATTTCTGGAAGTTCTATCAATCCCAGTGAACGAACATACCCT GAAGAAATGATTCAGACTGGGATATCTACAATTGATGTTATGAATTCTATTGCCCGTGGT CAGAAGATCCCTCTGTTTTCCGCTGCTGGTCTCCCACACAATGAAATTGCTGCTCAGATT TGCCGTCAGGCTGGTCTGGTAAAGCGTTTAGAGAAGAGTGACAATATCTTGGAGAGTTCC GAGGATGAAAATTTTGCGATTGTCTTTGCTGCTATGGGAGTAAACATGGAGACAGCACAA TTTTTCAAGCGTGATTTTGAGGAAAATGGTTCAATGGAGAGAGTTACCTTATTTCTTAAT CTGGCAAATGATCCAACTATCGAGCGTATTATCACCCCAAGAATTGCTCTCACCACAGCA GAATACTTGGCATATGAGTGCGGGAAGCATGTTCTTGTCATCCTGACTGACATGAGCTCA TATGCCGATGCACTTCGTGAAGTTTCTGCAGCTCGAGAGGAAGTACCTGGACGGCGTGGT TATCCTGGTTATATGTATACTGATTTGGCAACTATCTATGAGCGTGCTGGTCGCATAGAA GGAAGAAAAGGATCAATTACGCAGATACCCATTTTAACCATGCCTAATGATGATATTACA CATCCAACTCCTGATCTTACTGGTTATATCACTGAGGGACAGATCTACATTGACAGGCAA CTACATAATCGACAGATCTATCCACCGATTAATGTCCTTCCTTCACTCTCCCGGCTCATG AAGAGTGCTATTGGTGAAGGCATGACTCGCAGGGATCATTCTGATGTCTCGAACCAGCTG TATGCCAATTACGCCATAGGCAAGGACGTACAGGCGATGAAGGCAGTGGTTGGAGAGGAA GCGCTGTCATCAGAGGACCTGCTGTACCTCGAGTTTCTTGACAAGTTCGAGCGGAAGTTC GTGACACAAGGAGCATATGACACACGCAACATCTTCCAGTCGCTTGACCTCGCCTGGTCA CTACTGCGCATCTTTCCCCGAGAGCTGCTTCACCGTATACCAGCGAAAACCCTTGACCAG TATTATAGCCGTGATGCCTCCCACTGA

Peptide Sequence

PEP ID	Os01t0711000-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:29536726:29542409:1 gene:Os01g0711000 transcript:Os01t0711000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar ATP synthase subunit B isoform 2 (EC 3.6.3.14) (V-ATPase B subunit 2) (Vacuolar proton pump B subunit 2). (Os01t0711000-01)
Sequence	MVVANGNVDTEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQV LEVDGEKAVVQVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRVFNGSGKPIDNGPPIL PEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQI CRQAGLVKRLEKSDNILESSEDENFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLN LANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRG YPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQ LHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEE ALSSEDLLYLEFLDKFERKFVTQGAYDTRNIFQSLDLAWSLLRIFPRELLHRIPAKTLDQ YYSRDASH

Transcript Sequence

Transcript ID	Os01t0711000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:29536726:29542409:1 gene:Os01g0711000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar ATP synthase subunit B isoform 2 (EC 3.6.3.14) (V-ATPase B subunit 2) (Vacuolar proton pump B subunit 2). (Os01t0711000-01)
Sequence	GCCTTCTTCGCTGGGGGTGGGGCGACGAAACTTGCGCGATCTCCCCTCTCCTCTCCTCCG CTCGAATCTGCGCAGGCTTCTTCTACAATCTCAAACATGGTTGTTGCAAATGGTAATGTC GACACGGAGGAAGGAACTCTTGAGATTGGGATGGAGTACAGGACAGTCTCTGGAGTTGCT GGTCCTCTAGTCATTCTTGATAAAGTGAAGGGTCCTAAATACCAAGAAATTGTCAATATA CGATTAGGAGATGGCACAACTAGGCGTGGTCAAGTGCTTGAAGTCGATGGGGAGAAAGCT GTTGTTCAGGTTTTCGAAGGAACATCTGGTATTGACAACAAATACACAACTGTACAATTC ACCGGTGAGGTTCTAAAAACTCCAGTGTCACTGGATATGCTTGGACGTGTCTTCAATGGT TCTGGGAAACCTATAGATAATGGCCCACCGATTTTACCAGAGGCTTACTTGGATATTTCT GGAAGTTCTATCAATCCCAGTGAACGAACATACCCTGAAGAAATGATTCAGACTGGGATA TCTACAATTGATGTTATGAATTCTATTGCCCGTGGTCAGAAGATCCCTCTGTTTTCCGCT GCTGGTCTCCCACACAATGAAATTGCTGCTCAGATTTGCCGTCAGGCTGGTCTGGTAAAG CGTTTAGAGAAGAGTGACAATATCTTGGAGAGTTCCGAGGATGAAAATTTTGCGATTGTC TTTGCTGCTATGGGAGTAAACATGGAGACAGCACAATTTTTCAAGCGTGATTTTGAGGAA AATGGTTCAATGGAGAGAGTTACCTTATTTCTTAATCTGGCAAATGATCCAACTATCGAG CGTATTATCACCCCAAGAATTGCTCTCACCACAGCAGAATACTTGGCATATGAGTGCGGG AAGCATGTTCTTGTCATCCTGACTGACATGAGCTCATATGCCGATGCACTTCGTGAAGTT TCTGCAGCTCGAGAGGAAGTACCTGGACGGCGTGGTTATCCTGGTTATATGTATACTGAT TTGGCAACTATCTATGAGCGTGCTGGTCGCATAGAAGGAAGAAAAGGATCAATTACGCAG ATACCCATTTTAACCATGCCTAATGATGATATTACACATCCAACTCCTGATCTTACTGGT TATATCACTGAGGGACAGATCTACATTGACAGGCAACTACATAATCGACAGATCTATCCA CCGATTAATGTCCTTCCTTCACTCTCCCGGCTCATGAAGAGTGCTATTGGTGAAGGCATG ACTCGCAGGGATCATTCTGATGTCTCGAACCAGCTGTATGCCAATTACGCCATAGGCAAG GACGTACAGGCGATGAAGGCAGTGGTTGGAGAGGAAGCGCTGTCATCAGAGGACCTGCTG TACCTCGAGTTTCTTGACAAGTTCGAGCGGAAGTTCGTGACACAAGGAGCATATGACACA CGCAACATCTTCCAGTCGCTTGACCTCGCCTGGTCACTACTGCGCATCTTTCCCCGAGAG CTGCTTCACCGTATACCAGCGAAAACCCTTGACCAGTATTATAGCCGTGATGCCTCCCAC TGATCTGCAAAGGGTCGTGTGTAATAAGAAAAAAAACCATCCCGGACTCCCACTTCTTCT CTTTCATTTTTGCCACCAATGCATTCATTATTTTTTGTGTAAAAAACACGAATTATCTAG TGATGTGGGCTTCCATCATTGTTGTCCCAAGCACACCATGTATCATATTTATCTTCTTTT TTGGAAGAAAATGTATTATTTTCTTGCCGTGGAAAAATGAATAAGTGAGGACGAGTGAGC TAGGGATTTGGTTAATGTAAGAACACAATGAAATAAGCCATTTGCCTCATGGTTTTCGCC TGTCAATTGAGTTTCAGACCCTCTTGGCTTCG