Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0710200-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:29513380:29514941:-1 gene:Os01g0710200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:POLYAMINE OXIDASE 1 description:Polyamine oxidase, Polyamine catabolism (Os01t0710200-01)
Sequence	ATGGTGGCGAAGAAGCCGAGGGTTGTGGTGGTGGGCGCGGGGATATCGGGCCTCGCGGCG GCGCACCGGCTGTGCGGCGCGGGCGGGGACAGGTTCGAGGTGGCGGTGGTGGAGGCCGGC GACCGAGTCGGCGGCCGGATCCTCACGTCCGAGTTCGCCGGCCACCGGGTCGAGATGGGC GCCACGTGGGTGCAGGGCGTCGTCGGGAGCCCCGTGTACGCTCTGGCGCGCGACGCCGGC GCGCTCGGGGAGGAGGAGGGTCGTGGTCTCCCGTACGAGCGCATGGACGGCTTCCCCGAC CGCGTGCTGACCGTCGCAGAGGGCGGCGAGGTCGTCGACGCGGACACGGTGGCTGGCCCG ATCGAGGAGCTGTACAGGGGCATGATGGAGGCCGCGCGCGCCGGCGAGGCTGGTGGTGGA GGCGGCGTGGAGGAGTACCTGCGCCGTGGCCTACGGGCGTACCAGGCGGCGCGGTCTGCC GGCGGCGGCGGCGGCGGCGGCAAGGAGCTTGAGGAGGTGGACGAGGCGCTGCTCGCCATG CACATCAACCGGGAGCGGACCGACACCTCCGCCGACGACCTCGGCGACCTCGACCTCACC GCCGAGGGCGAGTACCGCGACTTCCCCGGCGAACACGTCACGATTCCCGGCGGCTACTCC CGCGTGGTCGAGCGCCTCGCCGCTGCGCTCCCGCCCGGCACCGTCCGCCTCGGACTCCGT CTCCGCCGTCTCAAGTGGGGCGGAACCCCTGTCCGCCTCCACTTCGCGGATGGCGCGCCG CCGCTCACCGCCGACCACGTCATCCTCACGGTCTCGCTGGGCGTCCTCAAGGCCAGCCTC GGCAACAAGGACACCGCCGGCGTTGGCGCGGCCGCCATCGCCTTCGACCCGCCGCTCCCG CCTTTCAAGCGCGAGGCCGTCGCGCGCCTCGGCTTCGGCGTCGTGAACAAGCTGTTCATG GAGGTGGAGGCCGTGGCGCCATCGGAACCGGAGGACGTCGCCGGCGTGCAGCCGGCGGCG GCGGGCTTCCCGTTCCTGCACATGGCGTTCCGGGGACACGTGTCCAAGATCCCGTGGTGG ATGCGCGGCACGGAGTCGATCTGCCCCGTCCACGCGGGCTCCACCGTGGCGCTGGCGTGG TTCGCCGGCCGGGAGGCGGCGCACCTCGAGTCCCTCCCCGACGACGACGTCATCCGCGGG GCCCACGCCACGCTGGACTCCTTCCTCCCGGCGGCGCCACGGTGGAGGGTGAGGAGGATC AAGCGGAGCGGGTGGGCCACGGACCCGCTCTTCCTCGGGTCATACAGCTACGTGGCCGTC GGATCGAGCGGCGACGACCTCGATCGCATGGCCGAACCGCTGCCACGTGGGCCAGACGCC GCCGCCGACGAGCGGCCGCCGTCGCCGCGGCTGCTGTTCGCCGGCGAGGCGACGCACCGC ACGCACTACTCAACGACGCACGCCGCGTACCTGAGCGGCGTGCGCGAGGCTAACCGGCTG CTGCAACACTACCGCGGCGGAGCGAATCACACCACGTAG

Peptide Sequence

PEP ID	Os01t0710200-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:29513380:29514941:-1 gene:Os01g0710200 transcript:Os01t0710200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:POLYAMINE OXIDASE 1 description:Polyamine oxidase, Polyamine catabolism (Os01t0710200-01)
Sequence	MVAKKPRVVVVGAGISGLAAAHRLCGAGGDRFEVAVVEAGDRVGGRILTSEFAGHRVEMG ATWVQGVVGSPVYALARDAGALGEEEGRGLPYERMDGFPDRVLTVAEGGEVVDADTVAGP IEELYRGMMEAARAGEAGGGGGVEEYLRRGLRAYQAARSAGGGGGGGKELEEVDEALLAM HINRERTDTSADDLGDLDLTAEGEYRDFPGEHVTIPGGYSRVVERLAAALPPGTVRLGLR LRRLKWGGTPVRLHFADGAPPLTADHVILTVSLGVLKASLGNKDTAGVGAAAIAFDPPLP PFKREAVARLGFGVVNKLFMEVEAVAPSEPEDVAGVQPAAAGFPFLHMAFRGHVSKIPWW MRGTESICPVHAGSTVALAWFAGREAAHLESLPDDDVIRGAHATLDSFLPAAPRWRVRRI KRSGWATDPLFLGSYSYVAVGSSGDDLDRMAEPLPRGPDAAADERPPSPRLLFAGEATHR THYSTTHAAYLSGVREANRLLQHYRGGANHTT

Transcript Sequence

Transcript ID	Os01t0710200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:29513380:29514941:-1 gene:Os01g0710200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:POLYAMINE OXIDASE 1 description:Polyamine oxidase, Polyamine catabolism (Os01t0710200-01)
Sequence	CCGTGCGCGCGGTTTCGTTCGCGATGGTGGCGAAGAAGCCGAGGGTTGTGGTGGTGGGCG CGGGGATATCGGGCCTCGCGGCGGCGCACCGGCTGTGCGGCGCGGGCGGGGACAGGTTCG AGGTGGCGGTGGTGGAGGCCGGCGACCGAGTCGGCGGCCGGATCCTCACGTCCGAGTTCG CCGGCCACCGGGTCGAGATGGGCGCCACGTGGGTGCAGGGCGTCGTCGGGAGCCCCGTGT ACGCTCTGGCGCGCGACGCCGGCGCGCTCGGGGAGGAGGAGGGTCGTGGTCTCCCGTACG AGCGCATGGACGGCTTCCCCGACCGCGTGCTGACCGTCGCAGAGGGCGGCGAGGTCGTCG ACGCGGACACGGTGGCTGGCCCGATCGAGGAGCTGTACAGGGGCATGATGGAGGCCGCGC GCGCCGGCGAGGCTGGTGGTGGAGGCGGCGTGGAGGAGTACCTGCGCCGTGGCCTACGGG CGTACCAGGCGGCGCGGTCTGCCGGCGGCGGCGGCGGCGGCGGCAAGGAGCTTGAGGAGG TGGACGAGGCGCTGCTCGCCATGCACATCAACCGGGAGCGGACCGACACCTCCGCCGACG ACCTCGGCGACCTCGACCTCACCGCCGAGGGCGAGTACCGCGACTTCCCCGGCGAACACG TCACGATTCCCGGCGGCTACTCCCGCGTGGTCGAGCGCCTCGCCGCTGCGCTCCCGCCCG GCACCGTCCGCCTCGGACTCCGTCTCCGCCGTCTCAAGTGGGGCGGAACCCCTGTCCGCC TCCACTTCGCGGATGGCGCGCCGCCGCTCACCGCCGACCACGTCATCCTCACGGTCTCGC TGGGCGTCCTCAAGGCCAGCCTCGGCAACAAGGACACCGCCGGCGTTGGCGCGGCCGCCA TCGCCTTCGACCCGCCGCTCCCGCCTTTCAAGCGCGAGGCCGTCGCGCGCCTCGGCTTCG GCGTCGTGAACAAGCTGTTCATGGAGGTGGAGGCCGTGGCGCCATCGGAACCGGAGGACG TCGCCGGCGTGCAGCCGGCGGCGGCGGGCTTCCCGTTCCTGCACATGGCGTTCCGGGGAC ACGTGTCCAAGATCCCGTGGTGGATGCGCGGCACGGAGTCGATCTGCCCCGTCCACGCGG GCTCCACCGTGGCGCTGGCGTGGTTCGCCGGCCGGGAGGCGGCGCACCTCGAGTCCCTCC CCGACGACGACGTCATCCGCGGGGCCCACGCCACGCTGGACTCCTTCCTCCCGGCGGCGC CACGGTGGAGGGTGAGGAGGATCAAGCGGAGCGGGTGGGCCACGGACCCGCTCTTCCTCG GGTCATACAGCTACGTGGCCGTCGGATCGAGCGGCGACGACCTCGATCGCATGGCCGAAC CGCTGCCACGTGGGCCAGACGCCGCCGCCGACGAGCGGCCGCCGTCGCCGCGGCTGCTGT TCGCCGGCGAGGCGACGCACCGCACGCACTACTCAACGACGCACGCCGCGTACCTGAGCG GCGTGCGCGAGGCTAACCGGCTGCTGCAACACTACCGCGGCGGAGCGAATCACACCACGT AG