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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0708600-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:29442652:29447102:1 gene:Os01g0708600 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAPP I complex, Trs31 domain containing protein. (Os01t0708600-01)
Sequence

ATGATCGGCGTCGGGAAGGCGAAGCAGTACGCCAACGTGCTCGACAAGCCCCTCAGCCGC
GGCAGGCAGGAGGTCAGTTTGAGTGCATTTGCGTTCCTGTTCTCAGAGTTGGTTCAATAC
AACCAGACACAGGTTGATAACATTGCTGAGCTGGAAAGAAGGCTGGAAGATGCTGGTTAT
GCTGTTGGTGCAAGAGTTCTTGAACTACTCTGTCACAGAGAGAAGGGGAATAGGCGAGAG
ACTCGACTGCTAGGTATATTATCGTTCATTCACAGCACTGTATGGAAAGTTTTGTTTGGG
AAGGTGGCTGACTCACTTGAGAAAGGAACAGAACATGAGGATGAATACATGATTAGTGAA
AAGGAGCTTCTTGTTAACCGGTTCATTTCGGTGCCCAAGGACATGGGAGCATTCAATTGT
GGAGCTTTTGTTGCAGGAATCGTAAGGGGTGTACTGGAAAATGCTGGCTTTCCTGCGGTA
GTTACTGCACACTTTGTGCCAATTGAGGGCCAACAAAGGCCAAGGACAACAATCTTGATA
AAATTTGCTGAAGAGGTTTTACAGCGAGAAGCTAGATTTGGCTAA

Peptide Sequence

PEP ID

Os01t0708600-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:29442652:29447102:1 gene:Os01g0708600 transcript:Os01t0708600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAPP I complex, Trs31 domain containing protein. (Os01t0708600-01)
Sequence

MIGVGKAKQYANVLDKPLSRGRQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
AVGARVLELLCHREKGNRRETRLLGILSFIHSTVWKVLFGKVADSLEKGTEHEDEYMISE
KELLVNRFISVPKDMGAFNCGAFVAGIVRGVLENAGFPAVVTAHFVPIEGQQRPRTTILI
KFAEEVLQREARFG

Transcript Sequence

Transcript ID

Os01t0708600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:29442652:29447102:1 gene:Os01g0708600 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAPP I complex, Trs31 domain containing protein. (Os01t0708600-01)
Sequence

AGAGCTCGACTACTCCGCTCCGCCCGGCCACAGCCCAATTCACGCCACCCGCTCCGCCTC
TCGCCGCCTCGACCGCGGCCGGCGGCCACCGCTCCGGAGGAGGGTGGGCAAGATGATCGG
CGTCGGGAAGGCGAAGCAGTACGCCAACGTGCTCGACAAGCCCCTCAGCCGCGGCAGGCA
GGAGGTCAGTTTGAGTGCATTTGCGTTCCTGTTCTCAGAGTTGGTTCAATACAACCAGAC
ACAGGTTGATAACATTGCTGAGCTGGAAAGAAGGCTGGAAGATGCTGGTTATGCTGTTGG
TGCAAGAGTTCTTGAACTACTCTGTCACAGAGAGAAGGGGAATAGGCGAGAGACTCGACT
GCTAGGTATATTATCGTTCATTCACAGCACTGTATGGAAAGTTTTGTTTGGGAAGGTGGC
TGACTCACTTGAGAAAGGAACAGAACATGAGGATGAATACATGATTAGTGAAAAGGAGCT
TCTTGTTAACCGGTTCATTTCGGTGCCCAAGGACATGGGAGCATTCAATTGTGGAGCTTT
TGTTGCAGGAATCGTAAGGGGTGTACTGGAAAATGCTGGCTTTCCTGCGGTAGTTACTGC
ACACTTTGTGCCAATTGAGGGCCAACAAAGGCCAAGGACAACAATCTTGATAAAATTTGC
TGAAGAGGTTTTACAGCGAGAAGCTAGATTTGGCTAAATTTTATCATATGTTCACACTTC
TTTCTGATCAATTGGTGAAGATACTGTTGAAATGTTTTTTTGTGGCTGACTCCACATGAT
TTGTGTACCAGTAGTTGCGAATAGAAGCGAAGGAGAAATCGTTTTGTTTGGAACTGTAAA
ACATTTGCTTGGATTTACCTCGTATATAATGAATATTCAAGAATTCTT