Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0707500-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:29382994:29385646:-1 gene:Os01g0707500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 118 description:Similar to Transcription factor LAX PANICLE. (Os01t0707500-01);Similar to Transcription factor LAX PANICLE. (Os01t0707500-02);Non-protein coding transcript. (Os01t0707500-03)
Sequence	ATGGAGACCTTCGGCTGGGCCGGCGGCGGGCAGCTGATGCACCACGACGACATCTACTTG CCGCGCTCGGTGGGGTGCGGGCGGCCGTTCGAGCTGGACGACGCGTTCCTGGGCGCGTGC TTCGGCGCCCAGCTCCAGTGCGACGGTGGCGTCGGCGGCGGCGACGGCGGCGGGTGTCTG CAGGGTACCTCGGGATTTGGCGCCGTGGCTGGAGACCCGTTGGGGTTGCTGTGCTCGGGG GACGTGTTTGCGTCTGTCGCCGAGGGCGCCGGCGGCGCGCACGACGACGGCCTCCTCGAC GCGGCGCTCGCCTTCTCCCGGAATCAGCTCGGGGGCGCCGCCTGCGACGGGAGCGACGGC GGGGCCGTGTCGAACGGCGCCATGCTGTCCAGCTACAGCGGCACCACCGGCGGCAACATC TCCTCCGGCGAGTCGAATAACTACAGCGGCGGCGGCGGTGGCTACGACGCCGAGGTGGTG TCGCCGACGTCCACCATGTCCGCAGCCACACAGTCGCTCCACCCCAAGCGAAAGCTATAC GACGACCACCACCACCCCGCCGGCATAGCAGCCGCAGCCGCAGCGCCACCGCTGGCGCCG TGCCCACGCCCCACCACCGGCGCCGTCGCCGCGAAGCGGAGGGCTTCCACGTCAGCAACA AGCATCACCTTCGGCCACCAGCCGCACCACCACCACGCGGGCGCCACCACCGCCGGGTAC GAGCCTGACATGGAAGCCATGGCGCAGGTGAAGGAGATGATCTACCGGGCGGCGGCCATG CGCCCCGTCCACCTCGGCACGGAGGCCGCCGCCGACAAGCCCCGCCGCAAGAACGTGCGC ATCTCGAGCGACCCGCAGACGGTGGCGGCGCGTCTCCGGCGGGAGCGCGTCAGCGACCGC CTCCGCGTCCTGCAGAAGCTGGTCCCCGGCGGCAACAAGATGGACACGGCGTCCATGCTC GACGAGGCGGCCAGCTACCTCAAGTTCCTCAAGTCCCAGGTCCAAAAGCTGGAAACCCTA GGCACCACCACCACCACGTCCAAGTTACCGCAGCAGTATTACAGCGGCAACATCAACAGC AGCAATAATCACCATGGATTCCTCGGATTCGCAGCAAATAACAACACCATTTCAGCTGGC TACGCAAATTCTAATGCTGGAAATGCAACGAAACTGTTGTAG

Peptide Sequence

PEP ID	Os01t0707500-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:29382994:29385646:-1 gene:Os01g0707500 transcript:Os01t0707500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 118 description:Similar to Transcription factor LAX PANICLE. (Os01t0707500-01);Similar to Transcription factor LAX PANICLE. (Os01t0707500-02);Non-protein coding transcript. (Os01t0707500-03)
Sequence	METFGWAGGGQLMHHDDIYLPRSVGCGRPFELDDAFLGACFGAQLQCDGGVGGGDGGGCL QGTSGFGAVAGDPLGLLCSGDVFASVAEGAGGAHDDGLLDAALAFSRNQLGGAACDGSDG GAVSNGAMLSSYSGTTGGNISSGESNNYSGGGGGYDAEVVSPTSTMSAATQSLHPKRKLY DDHHHPAGIAAAAAAPPLAPCPRPTTGAVAAKRRASTSATSITFGHQPHHHHAGATTAGY EPDMEAMAQVKEMIYRAAAMRPVHLGTEAAADKPRRKNVRISSDPQTVAARLRRERVSDR LRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKLETLGTTTTTSKLPQQYYSGNINS SNNHHGFLGFAANNNTISAGYANSNAGNATKLL

Transcript Sequence

Transcript ID	Os01t0707500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:29382994:29385646:-1 gene:Os01g0707500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 118 description:Similar to Transcription factor LAX PANICLE. (Os01t0707500-01);Similar to Transcription factor LAX PANICLE. (Os01t0707500-02);Non-protein coding transcript. (Os01t0707500-03)
Sequence	ATGAACATGAGGACCATCATATCCCTCATCCCAGATACATGATCTGTACTGTCTCCTCCT CTCTAGCTTCTCTCCTCTCCCTGCTGTGCCCCTTGCTTTGTTGCTTGGTCAATTAGAGCT AAGCAGCAAGCTAGCTTCCTGGAAGCAAGGCCGGCGCCTGGCTGGGACAAGAACCACAGG AACCACAGCTGACTGATTGATCAATCAATCAATCTTCTGCTGCCCTGCTGCCTCACAGCC TCAGCAAGACAGTACGTACAGATCAATTTTGGCCCTCTTGAGGCTCCGGCCGGTCGCCGA CTCGCCGTCGTCGAAGGTGCTCTCCGGCCGGCGGAGTTAACATTGAGCTTGATTTCAAGC CGCGCTCCGATCCGACCGGCAAAGCGCCGAAGCTGCCTTCCGTTTGTTTCACTCTGGTCT CTGGGGGCTCGCCATCAGCCATCCGTACCGAGCTGTAGTGTGCGCGGTTTTGTCGCGTCG TCGTACGTCGAGAATCCGTGAGCCAGACAGACAAGCCAGTGGTTTGGTGATTCTTGCGGC GGCGCGGCGATGGAGACCTTCGGCTGGGCCGGCGGCGGGCAGCTGATGCACCACGACGAC ATCTACTTGCCGCGCTCGGTGGGGTGCGGGCGGCCGTTCGAGCTGGACGACGCGTTCCTG GGCGCGTGCTTCGGCGCCCAGCTCCAGTGCGACGGTGGCGTCGGCGGCGGCGACGGCGGC GGGTGTCTGCAGGGTACCTCGGGATTTGGCGCCGTGGCTGGAGACCCGTTGGGGTTGCTG TGCTCGGGGGACGTGTTTGCGTCTGTCGCCGAGGGCGCCGGCGGCGCGCACGACGACGGC CTCCTCGACGCGGCGCTCGCCTTCTCCCGGAATCAGCTCGGGGGCGCCGCCTGCGACGGG AGCGACGGCGGGGCCGTGTCGAACGGCGCCATGCTGTCCAGCTACAGCGGCACCACCGGC GGCAACATCTCCTCCGGCGAGTCGAATAACTACAGCGGCGGCGGCGGTGGCTACGACGCC GAGGTGGTGTCGCCGACGTCCACCATGTCCGCAGCCACACAGTCGCTCCACCCCAAGCGA AAGCTATACGACGACCACCACCACCCCGCCGGCATAGCAGCCGCAGCCGCAGCGCCACCG CTGGCGCCGTGCCCACGCCCCACCACCGGCGCCGTCGCCGCGAAGCGGAGGGCTTCCACG TCAGCAACAAGCATCACCTTCGGCCACCAGCCGCACCACCACCACGCGGGCGCCACCACC GCCGGGTACGAGCCTGACATGGAAGCCATGGCGCAGGTGAAGGAGATGATCTACCGGGCG GCGGCCATGCGCCCCGTCCACCTCGGCACGGAGGCCGCCGCCGACAAGCCCCGCCGCAAG AACGTGCGCATCTCGAGCGACCCGCAGACGGTGGCGGCGCGTCTCCGGCGGGAGCGCGTC AGCGACCGCCTCCGCGTCCTGCAGAAGCTGGTCCCCGGCGGCAACAAGATGGACACGGCG TCCATGCTCGACGAGGCGGCCAGCTACCTCAAGTTCCTCAAGTCCCAGGTCCAAAAGCTG GAAACCCTAGGCACCACCACCACCACGTCCAAGTTACCGCAGCAGTATTACAGCGGCAAC ATCAACAGCAGCAATAATCACCATGGATTCCTCGGATTCGCAGCAAATAACAACACCATT TCAGCTGGCTACGCAAATTCTAATGCTGGAAATGCAACGAAACTGTTGTAGCACTGTGGC TAGCACAAGTACTTGATACGCACAACGTACGCGTGGTCTCGTCGTCTATATACATGTAGT AACATGCTGCTGTTTTCT