Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0706900-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:29327583:29334792:-1 gene:Os01g0706900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ILL2 description:Similar to Auxin amidohydrolase. (Os01t0706900-01)
Sequence

ATGGCGCGTGCGCGTGCGTCTGCCATGGGCGCCGCTCCTCCTCCGCACCTGCGTAGCCAT
GACCTCGTTGTCGTCGTCGCCGTCGCCGCGGCGGCGCTATGTCTCGCGTGCCGAGGTGCG
TCGGCGGGCGGCGGCGGCGGCGTCGACGTGCTCGATCGGGCGAGGCGGCCGGAGTTCGCG
GCGTGGATGGCGGGCGTCAGGTGGGCCATCCACGAGCGGCCAGAGCTGGCGTTCGAGGAG
ATCGAGACCAGCAGGCTGGTGAGGGCGGAGCTCGACGCCATGGGCGTCGCGTACAGGCAC
CCGGTCGCCGGCACGGGCGTCGTCGCGACCGTAGGCACCGGGCGCCCGCCGTTCGTCGCG
CTGCGCGCCGACATGGATGCACTCCCGATGCAGGAGGAGGTGCAGTGGGAGCACAAGAGT
AAGGTGGCCATGAAGATGCACGCCTGCGGCCACGACGCACACACCACCATGCTCCTCGGC
GCCGCCAGGATCCTCCAGGAGCGACGCCATGAGCTGCAGGGTACGGTGGTCCTCCTCTTC
CAGCCGGGGGAGGAGGTGGGCACCGGGGCCAGGAGGATGGTGGAAGCCGGCGCCGTGGAC
AACGTGGAGGCCATCTTCGGGTTCCACGTCAGCGTGGAGCTCCCCACCGGCGTGGTGGGA
TCGCGGCCCGGCCCGCTGCTCGCCGGCTGCGGCTTCTTCGAGGCGGTGATCACCGGGAAG
GGCGGCCACGCCGCACACCCCCACGCCAGCGTCGACCCCATCTTGGCCGCTTCCACCGTC
GTCCTCGCCCTGCAGGGCCTCGTCTCGCGGGAGGCCGACCCGCTGGAGGCCCAGGTGGTG
ACGGTGACGAGGTTCCTCGCCGGCGACGCGCTCAACGTGATCCCGGAGTCGATCACGATC
GGCGGCACGTTCCGGGTGTTCTCGAACGAGGGCTTCTTGCGGCTGAAGCGGCGGATCGAG
GAGGTGATCGTGGCGCAGTCGGCGGTGTACCGGTGCGCCGCGGCGGTGGACTTCCACGCG
GGGGGCAGGCCGCTGCTGCCCCCGACCATCAACAGCGCGGCGCTGCACGCGCACTTCCAG
GCCGTCGCGGCGGAGACGCTCGGCGCCTCGGCCGCGGTCCTCGGCGCGATGGAGCCGTGC
ATGGGGAGCGAGGACTTCGCCGTCTTCTCCGAGGCCGTGCCGGCGTCCCACTTCTACTTC
GTCGGGGTGCGCAACGAGGCGGAGGGGCTGGTGCACCTCGCGCACTCGCCGCACTTCCGC
GTCGACGACGCCGCGCTCCCGTACGGCGCGGCGTTGCACGCCAGCCTCGCCATGAGGTAC
CTGGACGAACGCCGGCGCGAGGGCGGCTCGCACCCTCACGAGGAACTCTAG

Peptide Sequence

PEP ID

Os01t0706900-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:29327583:29334792:-1 gene:Os01g0706900 transcript:Os01t0706900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ILL2 description:Similar to Auxin amidohydrolase. (Os01t0706900-01)
Sequence

MARARASAMGAAPPPHLRSHDLVVVVAVAAAALCLACRGASAGGGGGVDVLDRARRPEFA
AWMAGVRWAIHERPELAFEEIETSRLVRAELDAMGVAYRHPVAGTGVVATVGTGRPPFVA
LRADMDALPMQEEVQWEHKSKVAMKMHACGHDAHTTMLLGAARILQERRHELQGTVVLLF
QPGEEVGTGARRMVEAGAVDNVEAIFGFHVSVELPTGVVGSRPGPLLAGCGFFEAVITGK
GGHAAHPHASVDPILAASTVVLALQGLVSREADPLEAQVVTVTRFLAGDALNVIPESITI
GGTFRVFSNEGFLRLKRRIEEVIVAQSAVYRCAAAVDFHAGGRPLLPPTINSAALHAHFQ
AVAAETLGASAAVLGAMEPCMGSEDFAVFSEAVPASHFYFVGVRNEAEGLVHLAHSPHFR
VDDAALPYGAALHASLAMRYLDERRREGGSHPHEEL

Transcript Sequence

Transcript ID

Os01t0706900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:29327583:29334792:-1 gene:Os01g0706900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ILL2 description:Similar to Auxin amidohydrolase. (Os01t0706900-01)
Sequence

GGACATCGCATCGCGTGTATACTTACCAATTACCGTACCCGCGGCCGGTACCGCTCGTCC
TCGGTCGCGACCGCGCGCCATGGCGCGTGCGCGTGCGTCTGCCATGGGCGCCGCTCCTCC
TCCGCACCTGCGTAGCCATGACCTCGTTGTCGTCGTCGCCGTCGCCGCGGCGGCGCTATG
TCTCGCGTGCCGAGGTGCGTCGGCGGGCGGCGGCGGCGGCGTCGACGTGCTCGATCGGGC
GAGGCGGCCGGAGTTCGCGGCGTGGATGGCGGGCGTCAGGTGGGCCATCCACGAGCGGCC
AGAGCTGGCGTTCGAGGAGATCGAGACCAGCAGGCTGGTGAGGGCGGAGCTCGACGCCAT
GGGCGTCGCGTACAGGCACCCGGTCGCCGGCACGGGCGTCGTCGCGACCGTAGGCACCGG
GCGCCCGCCGTTCGTCGCGCTGCGCGCCGACATGGATGCACTCCCGATGCAGGAGGAGGT
GCAGTGGGAGCACAAGAGTAAGGTGGCCATGAAGATGCACGCCTGCGGCCACGACGCACA
CACCACCATGCTCCTCGGCGCCGCCAGGATCCTCCAGGAGCGACGCCATGAGCTGCAGGG
TACGGTGGTCCTCCTCTTCCAGCCGGGGGAGGAGGTGGGCACCGGGGCCAGGAGGATGGT
GGAAGCCGGCGCCGTGGACAACGTGGAGGCCATCTTCGGGTTCCACGTCAGCGTGGAGCT
CCCCACCGGCGTGGTGGGATCGCGGCCCGGCCCGCTGCTCGCCGGCTGCGGCTTCTTCGA
GGCGGTGATCACCGGGAAGGGCGGCCACGCCGCACACCCCCACGCCAGCGTCGACCCCAT
CTTGGCCGCTTCCACCGTCGTCCTCGCCCTGCAGGGCCTCGTCTCGCGGGAGGCCGACCC
GCTGGAGGCCCAGGTGGTGACGGTGACGAGGTTCCTCGCCGGCGACGCGCTCAACGTGAT
CCCGGAGTCGATCACGATCGGCGGCACGTTCCGGGTGTTCTCGAACGAGGGCTTCTTGCG
GCTGAAGCGGCGGATCGAGGAGGTGATCGTGGCGCAGTCGGCGGTGTACCGGTGCGCCGC
GGCGGTGGACTTCCACGCGGGGGGCAGGCCGCTGCTGCCCCCGACCATCAACAGCGCGGC
GCTGCACGCGCACTTCCAGGCCGTCGCGGCGGAGACGCTCGGCGCCTCGGCCGCGGTCCT
CGGCGCGATGGAGCCGTGCATGGGGAGCGAGGACTTCGCCGTCTTCTCCGAGGCCGTGCC
GGCGTCCCACTTCTACTTCGTCGGGGTGCGCAACGAGGCGGAGGGGCTGGTGCACCTCGC
GCACTCGCCGCACTTCCGCGTCGACGACGCCGCGCTCCCGTACGGCGCGGCGTTGCACGC
CAGCCTCGCCATGAGGTACCTGGACGAACGCCGGCGCGAGGGCGGCTCGCACCCTCACGA
GGAACTCTAGTTTCGTCCAGTCGCTGCATCTGCCTTGCATCCGACTTGGCGACGTCGAGT
CGCCACGGCGCCGGCGGCGTCTCTGTTCAGCCCACGCGCACGGCGGTTCGCGGAGCTCAA
GATGGTCGAGGTTAGGTATCCGCGGCGGATTTTGTCATCGACGATTACACTGTAAGGAAT
TCTGGGCTCGACCTTGGCATTCTGACGAAAACCTAGGTAGGAATGTAGAATGGGCGATTG
CATGTTCGATGCGGCGCCAGCGGCCCAGCGCGGTGCAAATTGTAAAGCTGATAAGCTGCA
CGCACGCAGAAATTATCTGAGAAGAAGAGTTCAGGCG