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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0706500-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:29314194:29316850:1 gene:Os01g0706500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L28e domain containing protein. (Os01t0706500-00)
Sequence

ATGGCCACGATTCCAGATTCTCTGGTCTGGGAGCTTGTCAAGAAGAACAATTCATTCCTG
GTCAAGCAGTTCGGCAATGGCAATGCCAAGGTTCAGTTCAGCAAGGAGCCCAACAACCTG
TACAATGTCCACTCTTACAAGCATTCTGGCCTGGCAAACAAGAAAACCGTGACGGTCCAG
CCTGCCAGTGGTAAGGAAACGGCAGTGGTCCTCTCTACAACCAAGACAGAGAAGCAGAAC
AAGCCTGCTAGCCTCTACCACAAGTCTGTCATGCGCAAGGAGTTCCGCAAAATGGCCAAG
GCTGTCAAGAACCAGGTCAGCGACAACTACTACCGGCCTGACCTTACCAAGCCAGCACTT
GCAAGGCTGAGCGCAGTCTACCGCAGCCTCCAGGTTGCCAAATCTGGTGTCAAAAAGAAG
AACAGGCAGGCAAACTAA

Peptide Sequence

PEP ID

Os01t0706500-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:29314194:29316850:1 gene:Os01g0706500 transcript:Os01t0706500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L28e domain containing protein. (Os01t0706500-00)
Sequence

MATIPDSLVWELVKKNNSFLVKQFGNGNAKVQFSKEPNNLYNVHSYKHSGLANKKTVTVQ
PASGKETAVVLSTTKTEKQNKPASLYHKSVMRKEFRKMAKAVKNQVSDNYYRPDLTKPAL
ARLSAVYRSLQVAKSGVKKKNRQAN

Transcript Sequence

Transcript ID

Os01t0706500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:29314194:29316850:1 gene:Os01g0706500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L28e domain containing protein. (Os01t0706500-00)
Sequence

GCAGATCGGCGGCGCGCGTCACTCCAATCTCCGGTTAGGATAAATGGCCACGATTCCAGA
TTCTCTGGTCTGGGAGCTTGTCAAGAAGAACAATTCATTCCTGGTCAAGCAGTTCGGCAA
TGGCAATGCCAAGGTTCAGTTCAGCAAGGAGCCCAACAACCTGTACAATGTCCACTCTTA
CAAGCATTCTGGCCTGGCAAACAAGAAAACCGTGACGGTCCAGCCTGCCAGTGGTAAGGA
AACGGCAGTGGTCCTCTCTACAACCAAGACAGAGAAGCAGAACAAGCCTGCTAGCCTCTA
CCACAAGTCTGTCATGCGCAAGGAGTTCCGCAAAATGGCCAAGGCTGTCAAGAACCAGGT
CAGCGACAACTACTACCGGCCTGACCTTACCAAGCCAGCACTTGCAAGGCTGAGCGCAGT
CTACCGCAGCCTCCAGGTTGCCAAATCTGGTGTCAAAAAGAAGAACAGGCAGGCAAACTA
AAAAAAGGCAAGATCCAATTAGCTTGTTTTGTGTATGGGTATTGATTTGTGCTTCCATCC
TCCTTGATTCCTTTTAATATGGTGCTCGGAGTATGCTTTTAGATTGTTTTGAGATTATGG
GCCTCAGAGTATGACGAATGCTGCTCACAAGAGAGCTAAAAATTTTCGTAGTAGGTTTCA
TGTCTGTACCCGTGATATATTATTAAGCATCTTAATTAATAGGGTATTAATAACCTCCC