Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0706100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:29285414:29288695:1 gene:Os01g0706100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0706100-01)
Sequence

ATGGTGCAGCTCGAGGAGCTAATCTCCTGCCTCCCGCCGCCGCCGGCGACCACCATCACC
CACCGCAAGATGCTCGCCCGCAGGAAAACCATGGAGATGGCCGTCGTCTCCGACCCCGCC
CCCGCCGCCGTCACCAACCTCAATTATGCCGGTGCCACACGCTCGTCTCCAGTCGCTGCA
AATATCCGTGGTACCCCGGTGATGAGGGACGTTCTCAGTCATCTCCCGGTAAAGATGGTG
CGGGAGTTAGGTCCCTTATTCGCCAGCGAATTTTGGCTATCCACCGTTATGGAAATTGAC
GACGAACAGCTGCTCCCCCAGAATGGCGAGCAAGTGGATCTCATTGAGAGGGTTGGGTCA
GTCCTTTCCACACAAGATGGGCCTTTCCCTACGGTGAGGCTCACCAACTTGTGCTTTCAG
CCATTTGGGGTGCAGGAATTACATTGCATAGACGATGATGAGTCTGCATTTATTATTCTG
ATGTCTTGGTTTAATCTCTTTAACTCGAAGAAGGTGACCAAGTTCATCTTTCTCAATAGA
GCTCAGCCAACGGCTAAACTTTTATTTGTGCCAGAAAACATTCTTAAGTGGTGGAGGCTC
GAGACCCTGTATTTATGTCAAATCAGGTTCAAGGACCCCTCTGGAACCATTGATTTCCAT
TTGCCGAATCTCGCGGAATTGGGGATTGTCAATTGTGAGTTCCACCATGATACACTGATG
AAGATGGTTGCACAGTGCCCAAAGCTCGAAAGGTTATCTCTGGCTTTTCTCGAGTTTTCT
ACCAAGATTCACTTTGAGTCTAATAGCCTCAAGAGGATGGTGCTCTGGAATTATTCTGCA
AGAGACAGTGTTAGAATTGTGGCCCCAAAACTATGCAGACTCATATTGCATAATGTTGGC
ACTTCTGAGCCTCAGCCCCATGATGAGCACCCTGATCCTGGCGACCATCGAACCATGGTG
TTATCTATGAACTCAGAAATCGATATGGATCTTGAAGTTTTAGGTTACATTGACCTGAAC
TCCCATGTGCCACTATTGAGTGAAGGGCAATCTTGCAAGTCTGTTAGGACTTTGGGAGTT
CAACTTGGGTTTGGGCATGATAATGAGTTTCACACCATGCGGCGTCTATTGAAATACTTT
CCATCTGTGGAGAACCTATACATACAGAGTACTAAACTGGACAATGTCACTATAGATCTA
ACAGAAGATCGCATTATTGACTTGTTTGAGCCAATAGAAGATCGTAAGATCATGATGGTT
GTATATGAGGCTTTTAAAGGTTCTGACCATGAGTTATGCTTAGCATCCGTGTTATTGCAG
AGGCTCCCTTCCCTGCAAAAAATGACGATATTCTATGACCGTGAGATCAGTGATTTAGTA
ATCAACAAGTCACACTCTTCCTTACAAGCAGCCATGCTCGGTGCCACAGTTGAGTTGAAC
TTTTGTGCATGCCCTGAGTCTTCATGGACTCTACAAGAAGCCCTAAACGCCGATCACTTA
GCATCTAAACCATGA

Peptide Sequence

PEP ID

Os01t0706100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:29285414:29288695:1 gene:Os01g0706100 transcript:Os01t0706100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0706100-01)
Sequence

MVQLEELISCLPPPPATTITHRKMLARRKTMEMAVVSDPAPAAVTNLNYAGATRSSPVAA
NIRGTPVMRDVLSHLPVKMVRELGPLFASEFWLSTVMEIDDEQLLPQNGEQVDLIERVGS
VLSTQDGPFPTVRLTNLCFQPFGVQELHCIDDDESAFIILMSWFNLFNSKKVTKFIFLNR
AQPTAKLLFVPENILKWWRLETLYLCQIRFKDPSGTIDFHLPNLAELGIVNCEFHHDTLM
KMVAQCPKLERLSLAFLEFSTKIHFESNSLKRMVLWNYSARDSVRIVAPKLCRLILHNVG
TSEPQPHDEHPDPGDHRTMVLSMNSEIDMDLEVLGYIDLNSHVPLLSEGQSCKSVRTLGV
QLGFGHDNEFHTMRRLLKYFPSVENLYIQSTKLDNVTIDLTEDRIIDLFEPIEDRKIMMV
VYEAFKGSDHELCLASVLLQRLPSLQKMTIFYDREISDLVINKSHSSLQAAMLGATVELN
FCACPESSWTLQEALNADHLASKP

Transcript Sequence

Transcript ID

Os01t0706100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:29285414:29288695:1 gene:Os01g0706100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0706100-01)
Sequence

ACTCCTCACTCCTCACTGTCCCGCCTCCACCGTCCCCTCCCCTACCGGTCGCCGCTGCCT
CCCTAGCCCGCCGCCGGCAAAGCTAATCCTATACTCGTATCCACGTTGCTTCTTCGAGAG
AGAGGATCGAAAAACTCGTAAGCATGGTGCAGCTCGAGGAGCTAATCTCCTGCCTCCCGC
CGCCGCCGGCGACCACCATCACCCACCGCAAGATGCTCGCCCGCAGGAAAACCATGGAGA
TGGCCGTCGTCTCCGACCCCGCCCCCGCCGCCGTCACCAACCTCAATTATGCCGGTGCCA
CACGCTCGTCTCCAGTCGCTGCAAATATCCGTGGTACCCCGGTGATGAGGGACGTTCTCA
GTCATCTCCCGGTAAAGATGGTGCGGGAGTTAGGTCCCTTATTCGCCAGCGAATTTTGGC
TATCCACCGTTATGGAAATTGACGACGAACAGCTGCTCCCCCAGAATGGCGAGCAAGTGG
ATCTCATTGAGAGGGTTGGGTCAGTCCTTTCCACACAAGATGGGCCTTTCCCTACGGTGA
GGCTCACCAACTTGTGCTTTCAGCCATTTGGGGTGCAGGAATTACATTGCATAGACGATG
ATGAGTCTGCATTTATTATTCTGATGTCTTGGTTTAATCTCTTTAACTCGAAGAAGGTGA
CCAAGTTCATCTTTCTCAATAGAGCTCAGCCAACGGCTAAACTTTTATTTGTGCCAGAAA
ACATTCTTAAGTGGTGGAGGCTCGAGACCCTGTATTTATGTCAAATCAGGTTCAAGGACC
CCTCTGGAACCATTGATTTCCATTTGCCGAATCTCGCGGAATTGGGGATTGTCAATTGTG
AGTTCCACCATGATACACTGATGAAGATGGTTGCACAGTGCCCAAAGCTCGAAAGGTTAT
CTCTGGCTTTTCTCGAGTTTTCTACCAAGATTCACTTTGAGTCTAATAGCCTCAAGAGGA
TGGTGCTCTGGAATTATTCTGCAAGAGACAGTGTTAGAATTGTGGCCCCAAAACTATGCA
GACTCATATTGCATAATGTTGGCACTTCTGAGCCTCAGCCCCATGATGAGCACCCTGATC
CTGGCGACCATCGAACCATGGTGTTATCTATGAACTCAGAAATCGATATGGATCTTGAAG
TTTTAGGTTACATTGACCTGAACTCCCATGTGCCACTATTGAGTGAAGGGCAATCTTGCA
AGTCTGTTAGGACTTTGGGAGTTCAACTTGGGTTTGGGCATGATAATGAGTTTCACACCA
TGCGGCGTCTATTGAAATACTTTCCATCTGTGGAGAACCTATACATACAGAGTACTAAAC
TGGACAATGTCACTATAGATCTAACAGAAGATCGCATTATTGACTTGTTTGAGCCAATAG
AAGATCGTAAGATCATGATGGTTGTATATGAGGCTTTTAAAGGTTCTGACCATGAGTTAT
GCTTAGCATCCGTGTTATTGCAGAGGCTCCCTTCCCTGCAAAAAATGACGATATTCTATG
ACCGTGAGATCAGTGATTTAGTAATCAACAAGTCACACTCTTCCTTACAAGCAGCCATGC
TCGGTGCCACAGTTGAGTTGAACTTTTGTGCATGCCCTGAGTCTTCATGGACTCTACAAG
AAGCCCTAAACGCCGATCACTTAGCATCTAAACCATGAGGATATGTCAAAAGCTGTCTAC
ATTTGGAGCTTGAAAGTGCAATTGGATAAGCATTTTGGACACTGGGAAGAGGATGCTGGA
CTTGTTGACGAACTTCAGAAAAGGAACAACACAATATGTTATTTGTGCCAAGCTAACTGA
TCTGTTGTTTCAATATCTAAAAAAACTGATCTGTTGTTTTAATGCCTACTAAGACCATAT
TATTGTTTTTTTTACAGTTAGTCCCATCACCTGTCATGATGACTTGACAGTTACTTTTTG
AACAAAATTTAGACCGCTCCTGTACTTTTCTCATTTTCTAGTTGGGAGATAATGTGCCAT
GATCCATACTTGTGGTTTGGTTTGTCAAGAATTCTCTTGTCAAATGCCTAGGAGGT