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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0705100-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:29231900:29232574:1 gene:Os01g0705100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GERMIN-LIKE PROTEIN 1-3 description:Similar to Germin-like protein. (Os01t0705100-00)
Sequence

ATGGCGTCGTCTCGCTCCGTCGTGCTCCGGGTGCTGGTCGCGGTGGCCGTCGTGGCAGCA
GCCGGGGCGCCGCGCCTCGCCGTCGCGGACTCGCCGCCGCTTCAGGACATCTGCGTGGCC
GACCTGCGGGCGGCGACAGCGGTCGACGGGTTCCCGTGCAAGCCGACGGCGTCCGTGGTG
AGCGACGACTTCTTCTGCGACGCCATCGTCCAGGCGCCCAGCACGAGCAACCCGTTCGGC
GTCAACTCCACGCGCGCCACGGTGTCCGCGTTCCCCGGCCTGAACACGCTGGGCCTCTCC
ATCACGCGCACCGACCTCGCGCCCGGCGGCCTCAACCCGCCGCACTCGCACCCGCGCGCC
TCGGAGCTCGTGCTCGTGCTCAGCGGCGAGGTCATGGTGGGGTTCACCACGGCGGCCAAC
CGGCTCTTCTCCAAGGTGGTCAGGGAGAAGGAGCTCTTCGTCGTGCCCCGCGGCCTGCAG
CACTTCCAGCTCAACGTCGGCGCCGGCAACGCGTCGTTCGTCGCCATGTTCGACAGCCAG
TCGCCCGGCCTCGTCACGCCGACCTTCGCGCTCTTCGCGACCCAGCCGGCCATGCCGATG
GAGGTGCTCGCCAAGACGTTTCTCATGGGCGAGGATGAAGTGGGCGCCATCAAATCTAAG
TTTGCCGGCTTCTGA

Peptide Sequence

PEP ID

Os01t0705100-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:29231900:29232574:1 gene:Os01g0705100 transcript:Os01t0705100-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GERMIN-LIKE PROTEIN 1-3 description:Similar to Germin-like protein. (Os01t0705100-00)
Sequence

MASSRSVVLRVLVAVAVVAAAGAPRLAVADSPPLQDICVADLRAATAVDGFPCKPTASVV
SDDFFCDAIVQAPSTSNPFGVNSTRATVSAFPGLNTLGLSITRTDLAPGGLNPPHSHPRA
SELVLVLSGEVMVGFTTAANRLFSKVVREKELFVVPRGLQHFQLNVGAGNASFVAMFDSQ
SPGLVTPTFALFATQPAMPMEVLAKTFLMGEDEVGAIKSKFAGF

Transcript Sequence

Transcript ID

Os01t0705100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:29231900:29232574:1 gene:Os01g0705100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GERMIN-LIKE PROTEIN 1-3 description:Similar to Germin-like protein. (Os01t0705100-00)
Sequence

ATGGCGTCGTCTCGCTCCGTCGTGCTCCGGGTGCTGGTCGCGGTGGCCGTCGTGGCAGCA
GCCGGGGCGCCGCGCCTCGCCGTCGCGGACTCGCCGCCGCTTCAGGACATCTGCGTGGCC
GACCTGCGGGCGGCGACAGCGGTCGACGGGTTCCCGTGCAAGCCGACGGCGTCCGTGGTG
AGCGACGACTTCTTCTGCGACGCCATCGTCCAGGCGCCCAGCACGAGCAACCCGTTCGGC
GTCAACTCCACGCGCGCCACGGTGTCCGCGTTCCCCGGCCTGAACACGCTGGGCCTCTCC
ATCACGCGCACCGACCTCGCGCCCGGCGGCCTCAACCCGCCGCACTCGCACCCGCGCGCC
TCGGAGCTCGTGCTCGTGCTCAGCGGCGAGGTCATGGTGGGGTTCACCACGGCGGCCAAC
CGGCTCTTCTCCAAGGTGGTCAGGGAGAAGGAGCTCTTCGTCGTGCCCCGCGGCCTGCAG
CACTTCCAGCTCAACGTCGGCGCCGGCAACGCGTCGTTCGTCGCCATGTTCGACAGCCAG
TCGCCCGGCCTCGTCACGCCGACCTTCGCGCTCTTCGCGACCCAGCCGGCCATGCCGATG
GAGGTGCTCGCCAAGACGTTTCTCATGGGCGAGGATGAAGTGGGCGCCATCAAATCTAAG
TTTGCCGGCTTCTGA