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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0704200-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:29191992:29194734:1 gene:Os01g0704200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os01t0704200-01)
Sequence

ATGGCCGCCGTCGCGAGCCCCGCCCTCCGGCTCAGGCCCCGCCCCCGGACCGCCGCGCCG
TCGCCTCCTCGCTGCCGCCTCAGCTCCTCCGCTTACTCGTATTCCAAGTTTGCAAGGTCA
TTGCCAATTCAGAGAGTAAATGGGGGTAGAATGCAGCACTTGGACGCCCTAAAAGGGCAT
GCTTTAAGAAGATACGGCAACCACGATGGAAGGTTTCATATCAAGCGAATTACTTCCTTC
GCTGCTATGGACAAACAGGAGTCAATTACTTCACCTACCACAGATGCGTTGCCGGTAGAA
GAGACCGATAATAGCACTGAGGATTCCCCTGCGTCTGGTAGCTCCTCCTATTTTACTGAG
AGGGGTAATGGAAAATCAGGGTTCATCTCATTTCAAGGCAGTAGTTATCAGATGAAAAGT
GTGGAGAGTGTGCCACATCCTGGCAAGGAAGCGTCTAGATTAGTTTGGTTTGTTGGTCCA
ACTATCCTTGTGGCCTTCTTGGTTCTTCCATCGCTTTACTTGCGCAAAGTACTCTCAGCT
GTGTTTGAGGATTCCTTGTTGACAGATTTTCTTATACTATTCTTTACCGAGGCTCTATTT
TATGGAGGAGTCGCAATTTTTGTCCTGTTGATTGATAAAGTCTGGAGGCCTTTGCAGCAA
GTAGCTCCTAAGAGTTATATCTGGTCAAAATCCAGATTTTTCCGTATTTCTTCAGTAACA
ACGATGGTTTTGAGCTTGATGATACCGCTTTTGACCATGGGAATGGTCTGGCCCTGGACT
GGACCAGCAGCTTCAGCTACTCTTGCCCCTTATCTGGTTGGTCTTGTTGTACAATTCGCA
TTCGAGCAGTATGCACGGCATCGGAAATCACCTTCTTGGCCAGTTATCCCTATCATCTTT
AAGATCTACAGGCTTCACCAACTGAACAGGGCAGCTCAGCTGGTGACAGCACTCACCTTT
TCTGTTAGAGGAACAGAGGCAACAAACCAAACCTTGGCTATCATGAACTCCTTAGGAGCA
TTATTGACTGTCCTCCAGATTCTTGGGGTTATCTGCGTATGGTCTCTATCGAGTTTCCTA
ATGAGGTTTCTTCCCTCTTCAGACATTCCAGACCCTTAA

Peptide Sequence

PEP ID

Os01t0704200-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:29191992:29194734:1 gene:Os01g0704200 transcript:Os01t0704200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os01t0704200-01)
Sequence

MAAVASPALRLRPRPRTAAPSPPRCRLSSSAYSYSKFARSLPIQRVNGGRMQHLDALKGH
ALRRYGNHDGRFHIKRITSFAAMDKQESITSPTTDALPVEETDNSTEDSPASGSSSYFTE
RGNGKSGFISFQGSSYQMKSVESVPHPGKEASRLVWFVGPTILVAFLVLPSLYLRKVLSA
VFEDSLLTDFLILFFTEALFYGGVAIFVLLIDKVWRPLQQVAPKSYIWSKSRFFRISSVT
TMVLSLMIPLLTMGMVWPWTGPAASATLAPYLVGLVVQFAFEQYARHRKSPSWPVIPIIF
KIYRLHQLNRAAQLVTALTFSVRGTEATNQTLAIMNSLGALLTVLQILGVICVWSLSSFL
MRFLPSSDIPDP

Transcript Sequence

Transcript ID

Os01t0704200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:29191992:29194734:1 gene:Os01g0704200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os01t0704200-01)
Sequence

GACTCCCCACACCAGCCGCCCGCCCGCCCGGCCACTGGCCGCTGCTACAGATAACGCCAC
GCCGGGAGAGACAGCCCGCGCCCATGGCCGCCGTCGCGAGCCCCGCCCTCCGGCTCAGGC
CCCGCCCCCGGACCGCCGCGCCGTCGCCTCCTCGCTGCCGCCTCAGCTCCTCCGCTTACT
CGTATTCCAAGTTTGCAAGGTCATTGCCAATTCAGAGAGTAAATGGGGGTAGAATGCAGC
ACTTGGACGCCCTAAAAGGGCATGCTTTAAGAAGATACGGCAACCACGATGGAAGGTTTC
ATATCAAGCGAATTACTTCCTTCGCTGCTATGGACAAACAGGAGTCAATTACTTCACCTA
CCACAGATGCGTTGCCGGTAGAAGAGACCGATAATAGCACTGAGGATTCCCCTGCGTCTG
GTAGCTCCTCCTATTTTACTGAGAGGGGTAATGGAAAATCAGGGTTCATCTCATTTCAAG
GCAGTAGTTATCAGATGAAAAGTGTGGAGAGTGTGCCACATCCTGGCAAGGAAGCGTCTA
GATTAGTTTGGTTTGTTGGTCCAACTATCCTTGTGGCCTTCTTGGTTCTTCCATCGCTTT
ACTTGCGCAAAGTACTCTCAGCTGTGTTTGAGGATTCCTTGTTGACAGATTTTCTTATAC
TATTCTTTACCGAGGCTCTATTTTATGGAGGAGTCGCAATTTTTGTCCTGTTGATTGATA
AAGTCTGGAGGCCTTTGCAGCAAGTAGCTCCTAAGAGTTATATCTGGTCAAAATCCAGAT
TTTTCCGTATTTCTTCAGTAACAACGATGGTTTTGAGCTTGATGATACCGCTTTTGACCA
TGGGAATGGTCTGGCCCTGGACTGGACCAGCAGCTTCAGCTACTCTTGCCCCTTATCTGG
TTGGTCTTGTTGTACAATTCGCATTCGAGCAGTATGCACGGCATCGGAAATCACCTTCTT
GGCCAGTTATCCCTATCATCTTTAAGATCTACAGGCTTCACCAACTGAACAGGGCAGCTC
AGCTGGTGACAGCACTCACCTTTTCTGTTAGAGGAACAGAGGCAACAAACCAAACCTTGG
CTATCATGAACTCCTTAGGAGCATTATTGACTGTCCTCCAGATTCTTGGGGTTATCTGCG
TATGGTCTCTATCGAGTTTCCTAATGAGGTTTCTTCCCTCTTCAGACATTCCAGACCCTT
AACTTCTATCAGCTGAGGTAGCACTTAAAATTATGTGTACAGTCTCCATATTGTAAATCA
ATTTACCTGGAGCCAGTTGCCCAGTTGATAATGTCTG