Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0704100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:29188850:29190936:1 gene:Os01g0704100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH AFFINITY NITRATE TRANSPORTER description:Nitrate transporter, Nitrate transport (Os01t0704100-01);Nitrate transporter, Long-distance nitrate transport (Os01t0704100-02)
Sequence

ATGGAGGCTAAGCCGGTGGCGATGGAGGTGGAGGGGGTCGAGGCGGCGGGGGGCAAGCCG
CGGTTCAGGATGCCGGTGGACTCCGACCTCAAGGCGACGGAGTTCTGGCTCTTCTCCTTC
GCGAGGCCACACATGGCCTCCTTCCACATGGCGTGGTTCTCCTTCTTCTGCTGCTTCGTG
TCCACGTTCGCCGTGTTCGCGCGTCTGGCCATGGGCACGGCGTGCGACCTGGTCGGGCCC
AGGCTGGCCTCCGCGTCTCTGATCCTCCTCACCACACCGGCGGTGTACTGCTCCTCCATC
ATCCAGTCCCCGTCGGGGTACCTCCTCGTGCGCTTCTTCACGGGCATCTCGCTGGCGTCG
TTCGTGTCGGCGCAGTTCTGGATGAGCTCCATGTTCTCGGCCCCCAAAGTGGGGCTGGCC
AACGGCGTGGCCGGCGGCTGGGGCAACCTCGGCGGCGGCGCCGTCCAGCTGCTCATGCCG
CTCGTGTACGAGGCCATCCACAAGATCGGTAGCACGCCGTTCACGGCGTGGCGCATCGCC
TTCTTCATCCCGGGCCTGATGCAGACGTTCTCGGCCATCGCCGTGCTGGCGTTCGGGCAG
GACATGCCCGGCGGCAACTACGGGAAGCTCCACAAGACTGGCGACATGCACAAGGACAGC
TTCGGCAACGTGCTGCGCCACGCCCTCACCAACTACCGCGGCTGGATCCTGGCGCTCACC
TACGGCTACAGCTTCGGCGTCGAGCTCACCATCGACAACGTCGTGCACCAGTACTTCTAC
GACCGCTTCGACGTCAACCTCCAGACCGCCGGGCTCATCGCCGCCAGCTTCGGGATGGCC
AACATCATCTCCCGCCCCGGCGGCGGGCTACTCTCCGACTGGCTCTCCAGCCGGTACGGC
ATGCGCGGCAGGCTGTGGGGGCTGTGGACTGTGCAGACCATCGGCGGCGTCCTCTGCGTG
GTGCTCGGAATCGTCGACTTCTCCTTCGCCGCGTCCGTCGCCGTGATGGTGCTCTTCTCC
TTCTTCGTCCAGGCCGCGTGCGGGCTCACCTTCGGCATCGTGCCGTTCGTGTCGCGGAGG
TCGCTGGGGCTCATCTCCGGGATGACCGGCGGCGGGGGCAACGTGGGCGCCGTGCTGACG
CAGTACATCTTCTTCCACGGCACAAAGTACAAGACGGAGACCGGGATCAAGTACATGGGG
CTCATGATCATCGCGTGCACGCTGCCCGTCATGCTCATCTACTTCCCGCAGTGGGGCGGC
ATGCTCGTAGGCCCGAGGAAGGGGGCCACGGCGGAGGAGTACTACAGCCGGGAGTGGTCG
GATCACGAGCGCGAGAAGGGTTTCAACGCGGCCAGCGTGCGGTTCGCGGAGAACAGCGTG
CGCGAGGGCGGGAGGTCGTCGGCGAATGGCGGACAGCCCAGGCACACCGTCCCCGTCGAC
GCGTCGCCGGCCGGGGTGTGA

Peptide Sequence

PEP ID

Os01t0704100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:29188850:29190936:1 gene:Os01g0704100 transcript:Os01t0704100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH AFFINITY NITRATE TRANSPORTER description:Nitrate transporter, Nitrate transport (Os01t0704100-01);Nitrate transporter, Long-distance nitrate transport (Os01t0704100-02)
Sequence

MEAKPVAMEVEGVEAAGGKPRFRMPVDSDLKATEFWLFSFARPHMASFHMAWFSFFCCFV
STFAVFARLAMGTACDLVGPRLASASLILLTTPAVYCSSIIQSPSGYLLVRFFTGISLAS
FVSAQFWMSSMFSAPKVGLANGVAGGWGNLGGGAVQLLMPLVYEAIHKIGSTPFTAWRIA
FFIPGLMQTFSAIAVLAFGQDMPGGNYGKLHKTGDMHKDSFGNVLRHALTNYRGWILALT
YGYSFGVELTIDNVVHQYFYDRFDVNLQTAGLIAASFGMANIISRPGGGLLSDWLSSRYG
MRGRLWGLWTVQTIGGVLCVVLGIVDFSFAASVAVMVLFSFFVQAACGLTFGIVPFVSRR
SLGLISGMTGGGGNVGAVLTQYIFFHGTKYKTETGIKYMGLMIIACTLPVMLIYFPQWGG
MLVGPRKGATAEEYYSREWSDHEREKGFNAASVRFAENSVREGGRSSANGGQPRHTVPVD
ASPAGV

Transcript Sequence

Transcript ID

Os01t0704100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:29188850:29190936:1 gene:Os01g0704100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH AFFINITY NITRATE TRANSPORTER description:Nitrate transporter, Nitrate transport (Os01t0704100-01);Nitrate transporter, Long-distance nitrate transport (Os01t0704100-02)
Sequence

AGCGCCGGCCTCCCACCGGTCGCGTAAGATCACGCCCGAAATCTTTATTCATTTTCTCTC
CACCGGTTGCCCTCTCGCCGCACCCAACCATCGCGCCACGCCGCGCCGCGCTGCCGGAGC
CGCGCTTTCCGCTATGCTATAAGAGCTGACGCGCAGGGCACAGCGGATGTACGTACACAC
AGTCACTAGCTAAGCTGCTAGCCTTGCTACCACGTGTTGGAGATGGAGGCTAAGCCGGTG
GCGATGGAGGTGGAGGGGGTCGAGGCGGCGGGGGGCAAGCCGCGGTTCAGGATGCCGGTG
GACTCCGACCTCAAGGCGACGGAGTTCTGGCTCTTCTCCTTCGCGAGGCCACACATGGCC
TCCTTCCACATGGCGTGGTTCTCCTTCTTCTGCTGCTTCGTGTCCACGTTCGCCGTGTTC
GCGCGTCTGGCCATGGGCACGGCGTGCGACCTGGTCGGGCCCAGGCTGGCCTCCGCGTCT
CTGATCCTCCTCACCACACCGGCGGTGTACTGCTCCTCCATCATCCAGTCCCCGTCGGGG
TACCTCCTCGTGCGCTTCTTCACGGGCATCTCGCTGGCGTCGTTCGTGTCGGCGCAGTTC
TGGATGAGCTCCATGTTCTCGGCCCCCAAAGTGGGGCTGGCCAACGGCGTGGCCGGCGGC
TGGGGCAACCTCGGCGGCGGCGCCGTCCAGCTGCTCATGCCGCTCGTGTACGAGGCCATC
CACAAGATCGGTAGCACGCCGTTCACGGCGTGGCGCATCGCCTTCTTCATCCCGGGCCTG
ATGCAGACGTTCTCGGCCATCGCCGTGCTGGCGTTCGGGCAGGACATGCCCGGCGGCAAC
TACGGGAAGCTCCACAAGACTGGCGACATGCACAAGGACAGCTTCGGCAACGTGCTGCGC
CACGCCCTCACCAACTACCGCGGCTGGATCCTGGCGCTCACCTACGGCTACAGCTTCGGC
GTCGAGCTCACCATCGACAACGTCGTGCACCAGTACTTCTACGACCGCTTCGACGTCAAC
CTCCAGACCGCCGGGCTCATCGCCGCCAGCTTCGGGATGGCCAACATCATCTCCCGCCCC
GGCGGCGGGCTACTCTCCGACTGGCTCTCCAGCCGGTACGGCATGCGCGGCAGGCTGTGG
GGGCTGTGGACTGTGCAGACCATCGGCGGCGTCCTCTGCGTGGTGCTCGGAATCGTCGAC
TTCTCCTTCGCCGCGTCCGTCGCCGTGATGGTGCTCTTCTCCTTCTTCGTCCAGGCCGCG
TGCGGGCTCACCTTCGGCATCGTGCCGTTCGTGTCGCGGAGGTCGCTGGGGCTCATCTCC
GGGATGACCGGCGGCGGGGGCAACGTGGGCGCCGTGCTGACGCAGTACATCTTCTTCCAC
GGCACAAAGTACAAGACGGAGACCGGGATCAAGTACATGGGGCTCATGATCATCGCGTGC
ACGCTGCCCGTCATGCTCATCTACTTCCCGCAGTGGGGCGGCATGCTCGTAGGCCCGAGG
AAGGGGGCCACGGCGGAGGAGTACTACAGCCGGGAGTGGTCGGATCACGAGCGCGAGAAG
GGTTTCAACGCGGCCAGCGTGCGGTTCGCGGAGAACAGCGTGCGCGAGGGCGGGAGGTCG
TCGGCGAATGGCGGACAGCCCAGGCACACCGTCCCCGTCGACGCGTCGCCGGCCGGGGTG
TGAAGAATGCCACGGACAATAAGGTCGCGGTTGTAGTACAACTGTACAAATTGATGGTAC
GTGTCGTTTGACCGCGCGCGCGCACAGTGTGGGTCGTGGCCTCGTGGGCTTAGTGGAGTA
CAGTGAGGGGTGTACGTGTGTCGTGGCGCGCGCGGTCACCTCGGTGGCCTTGGGATTGGG
GGGGCACTATACGCTAGTACTCCAGATATATACGGGTTTGATTTACTTCTGTGGATCGGC
GCTTGTTGGTGGTTTGCTCCCTGTGGTTTTTGTGATGGTAATCATACTCATACTCAAACA
GTCAAAACTTTTTGATG