Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0704000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:29183845:29184972:-1 gene:Os01g0704000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os01t0704000-01)
Sequence

ATGTTCCGACACCTCGCCGCCCTGATCCTGTCCGCCGTCGTCTTGGCGGCGTCCACAAGC
TCCGGCGTCGTCGATGCCCGTCCTGTCCACACCGGCCCGTACCACGTCGTCATCAGAACC
GCCGCCAAGCCCAGCCGTCGCCTGATCGGGCTCGGCGGCAATGCCGCCATATGCCAAGAG
GTGCACTACAAGGCGCTGTGCGGCACGCTGACGACGCTGCCGGGGGTGATGACGCCGCAG
CAGCTGCTGGACGCGGCGTTGCGGGTGGCGGAGTCCAAGGCCATGATGGCGGAGAAGCGG
CTGGCCGACGTGATGAAGTCGCGCGCGGTGAAGGCCGAAGGCACGAGCATGTCGTCGACG
CTCGACACGTGCAAGGGCGCCTACTCGTCGCTGGCCGACGCGCTGCAGAAGGCGCGCGAC
ACGATCAAGAGCGGCGGCAGCCACGACGACCTGATGACCGAGCTGTCGTCCGCCTCCACC
TTCTCCACCGACTGCGGGGAAGCCTTCGACGAGTTCCCGGACCTCACGTCGCCCATACCC
GGGGCGCAGCGCCACGTCAACCGCCTCGTCAGCAACTGCCTCGACCTGGCTGCCACCATC
AAAGAAAACTGA

Peptide Sequence

PEP ID

Os01t0704000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:29183845:29184972:-1 gene:Os01g0704000 transcript:Os01t0704000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os01t0704000-01)
Sequence

MFRHLAALILSAVVLAASTSSGVVDARPVHTGPYHVVIRTAAKPSRRLIGLGGNAAICQE
VHYKALCGTLTTLPGVMTPQQLLDAALRVAESKAMMAEKRLADVMKSRAVKAEGTSMSST
LDTCKGAYSSLADALQKARDTIKSGGSHDDLMTELSSASTFSTDCGEAFDEFPDLTSPIP
GAQRHVNRLVSNCLDLAATIKEN

Transcript Sequence

Transcript ID

Os01t0704000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:29183845:29184972:-1 gene:Os01g0704000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os01t0704000-01)
Sequence

CTCAGACACCAAAGGAACTTGTTTTTTGTATTTTTCTTTTCGGTAGCTACTTTCTACATC
TCTCTTATTTGGATCACGTATTATCCTTTTTCATTCCACGACCGACGACCAATGTTCCGA
CACCTCGCCGCCCTGATCCTGTCCGCCGTCGTCTTGGCGGCGTCCACAAGCTCCGGCGTC
GTCGATGCCCGTCCTGTCCACACCGGCCCGTACCACGTCGTCATCAGAACCGCCGCCAAG
CCCAGCCGTCGCCTGATCGGGCTCGGCGGCAATGCCGCCATATGCCAAGAGGTGCACTAC
AAGGCGCTGTGCGGCACGCTGACGACGCTGCCGGGGGTGATGACGCCGCAGCAGCTGCTG
GACGCGGCGTTGCGGGTGGCGGAGTCCAAGGCCATGATGGCGGAGAAGCGGCTGGCCGAC
GTGATGAAGTCGCGCGCGGTGAAGGCCGAAGGCACGAGCATGTCGTCGACGCTCGACACG
TGCAAGGGCGCCTACTCGTCGCTGGCCGACGCGCTGCAGAAGGCGCGCGACACGATCAAG
AGCGGCGGCAGCCACGACGACCTGATGACCGAGCTGTCGTCCGCCTCCACCTTCTCCACC
GACTGCGGGGAAGCCTTCGACGAGTTCCCGGACCTCACGTCGCCCATACCCGGGGCGCAG
CGCCACGTCAACCGCCTCGTCAGCAACTGCCTCGACCTGGCTGCCACCATCAAAGAAAAC
TGATCGATGGCGTGGACGCACACGTGCCGCGCCGGCCGGCCGCGCTAGGTTTGTAGGCTG
CTTCTGGCTGCAGGCGAGCGTGCAAGGCTACAACGACACGTACTGCATGTACTGCGCACA
CTCTGCCTTTTCATGTACGTATACGTGTGTACTAGCGTACATGGTGTCTGTATGTACACT
GGTCATGGGGAGAATGGGGAGAGCATGCAGTGCGTATGTTTTTATCAATATTTCTCGCAG
CGGCATATATAGGCGTCTTGGTCTTGGAGATTAGC