Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0703300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:29152729:29154822:1 gene:Os01g0703300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0703300-01);Similar to zinc finger (C3HC4-type RING finger) family protein. (Os01t0703300-02)
Sequence	ATGCGGCCGCCCTCGTCGTCGGCGACGCCCGGGACGGGCCGGGTGTCGGCGTTCACGATG CGCGCGGTGGCGCGCATGTCGAGGGCGCGGTGGTTCATCTTCCTGAGGCGGGTGTACCAG TACCAGAACGGCCCGAGGTCCGACCTGGGCTCCAACCCCTTCAACTCGCCCGGCTGGCTC GCCCTCGAGCTCGGCGTGATCATGGCGCAGATGGTCGTCACCACCGCCGTCGTCGCCACC TCCCCCAAGGAGCGCCCCGCGTGGCCGCTCCGGGTTTGGGTCGCCGCCTACAACGTGGGC AACGTGCTCAGCCTCCCCCTCCTCTACTGGCGCCACCGGCATTCCTCCTCCGGCGCCCGC GGCGGCACGCTCTCCGACGATCCCGAGATGCACGGCGCCAACGACCCTCTAAGGAACAGG TCGTATCTGATGAACAAGGCACGGGCGTTCCTGGAGCTGTTCTTCGCGATGTGGTTCGTG ATGGGCAACGTGTGGGTGTTCGACGCGCGGCTCGGGTCGTTCCACCGCGCGCCGAGGCTG TACGCGCTCTGCATCGGCCTCCTCGCATGGAACGCCGTCGTCTACTCGCTCCCATTCCTC CTCTTCCTCCTGCTCTGCTGCTTCGTCCCGGCCGTCGGCTACGCGCTCGGGTACAACATG AACTCCGCGTCCGTCGGCCGGGGCGCCTCCGACGAGCAGCTCGCCGCGCTGCCGCAGTGG CGGTTCAAGGAGCCGGCCGACGCGCCGAGAGACCGCGACCACGACGATCAGGAGTGCTGC ATATGCCTGGCTCAGTACAAGGAGAAGGAGGAGGTGAGGCAGCTGCCGTGCACGCACATG TTCCACCTGAAATGCGTGGACAGGTGGCTCAGGATCATCTCCTCTTGCCCTCTCTGCAAG CAAGAGCTCAGCTAG

Peptide Sequence

PEP ID	Os01t0703300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:29152729:29154822:1 gene:Os01g0703300 transcript:Os01t0703300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0703300-01);Similar to zinc finger (C3HC4-type RING finger) family protein. (Os01t0703300-02)
Sequence	MRPPSSSATPGTGRVSAFTMRAVARMSRARWFIFLRRVYQYQNGPRSDLGSNPFNSPGWL ALELGVIMAQMVVTTAVVATSPKERPAWPLRVWVAAYNVGNVLSLPLLYWRHRHSSSGAR GGTLSDDPEMHGANDPLRNRSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFHRAPRL YALCIGLLAWNAVVYSLPFLLFLLLCCFVPAVGYALGYNMNSASVGRGASDEQLAALPQW RFKEPADAPRDRDHDDQECCICLAQYKEKEEVRQLPCTHMFHLKCVDRWLRIISSCPLCK QELS

Transcript Sequence

Transcript ID	Os01t0703300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:29152729:29154822:1 gene:Os01g0703300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0703300-01);Similar to zinc finger (C3HC4-type RING finger) family protein. (Os01t0703300-02)
Sequence	AATGCCCCTCCCCCTTGACCGGCCACCACAATGCGGCCGCCCTCGTCGTCGGCGACGCCC GGGACGGGCCGGGTGTCGGCGTTCACGATGCGCGCGGTGGCGCGCATGTCGAGGGCGCGG TGGTTCATCTTCCTGAGGCGGGTGTACCAGTACCAGAACGGCCCGAGGTCCGACCTGGGC TCCAACCCCTTCAACTCGCCCGGCTGGCTCGCCCTCGAGCTCGGCGTGATCATGGCGCAG ATGGTCGTCACCACCGCCGTCGTCGCCACCTCCCCCAAGGAGCGCCCCGCGTGGCCGCTC CGGGTTTGGGTCGCCGCCTACAACGTGGGCAACGTGCTCAGCCTCCCCCTCCTCTACTGG CGCCACCGGCATTCCTCCTCCGGCGCCCGCGGCGGCACGCTCTCCGACGATCCCGAGATG CACGGCGCCAACGACCCTCTAAGGAACAGGTCGTATCTGATGAACAAGGCACGGGCGTTC CTGGAGCTGTTCTTCGCGATGTGGTTCGTGATGGGCAACGTGTGGGTGTTCGACGCGCGG CTCGGGTCGTTCCACCGCGCGCCGAGGCTGTACGCGCTCTGCATCGGCCTCCTCGCATGG AACGCCGTCGTCTACTCGCTCCCATTCCTCCTCTTCCTCCTGCTCTGCTGCTTCGTCCCG GCCGTCGGCTACGCGCTCGGGTACAACATGAACTCCGCGTCCGTCGGCCGGGGCGCCTCC GACGAGCAGCTCGCCGCGCTGCCGCAGTGGCGGTTCAAGGAGCCGGCCGACGCGCCGAGA GACCGCGACCACGACGATCAGGAGTGCTGCATATGCCTGGCTCAGTACAAGGAGAAGGAG GAGGTGAGGCAGCTGCCGTGCACGCACATGTTCCACCTGAAATGCGTGGACAGGTGGCTC AGGATCATCTCCTCTTGCCCTCTCTGCAAGCAAGAGCTCAGCTAGAAAAACAAGCTGACA TGAATACGGAGCTACTGATACCGCGCCTTCCGACGCATGCGTCGCACCTCACGGAAGAAG AAAAAGAAAAGAAAAAAAAACCCTGGCACGCCAACCATGCGTGCACTGACCTAGTTCGAT ATTGCTGATGACGGCACGATGAATATTTATGCATACACTTGCATGTGAAAAAGATATGCT TGGATTAATTAGGCTAGGTAGACAAGCGGGAAATGTGTAAAAGAGTTTTTTTGTGTGTGT GTGTGTGTGTGTGTTGTTTGCGGTGTTGTTGCATCTCTCGAATGTGGTCGATCGAGATGC GCGTGTACGTAGTTTTTTTCAGCAGAAACCAAACGAGAACATATACCAGGGTTTGCGCTC GTGCTCCAGCGAATGCCAACCCAAAGGTATTCGGCCCGGTCGAAACTACTACAGTACTGT ATTCTAGGCCTGGCTCAGAGTGGGCCAACATTTTCGGCCCAGTTTAT